环境样品中DNA的分离纯化和文库构建

采用研磨 /冻融和SDS/蛋白酶K热处理等理化方法 ,直接从性质不同的环境样品中提取和纯化混合基因组DNA。所获得纯品DNA的产量为每克样品 2～ 1 6μg。对纯品DNA进行限制性内切酶处理后 ,构建了以pUC1 8为载体的DNA文库。建库效率为从每克环境样品获得约 1 0 3～ 1 0 4 个含 3～ 8kb外源随机插入片段的克隆。通过DNA序列测定和基因注释 ,对从文库中随机选取的克隆进行了分析 ,发现外源插入片段均含序列未见报道的新基因。本文所做的尝试对于保存、研究和开发未培养微生物基因资源具有意义     

影响天然林下层植物物种多样性的林分因子的研究

以我国东北过伐林区3种典型森林类型为对象,用多元逐步回归方法来研究影响天然林下层植物多样性的林分因子,尤其是与森林经营有关的林分因子,从而通过经营来维持和增加物种多样性。研究表明,与经营有关的因子中对下层植物多样性有显著影响的有林分郁闭度、公顷株数和树种多样性。因此,在林分发展的一定阶段,应采取合理经营措施如采伐来控制林分密度,保持多树种的混交,来维持和增加树种多样性。     

Vegetation composition,structure, and biomass of two unpolluted watersheds in the Cordillera de Piuchué, Chiloé Island,Chile

Research in pristine forests provides a necessary reference of energy and nutrient cycling in absence of anthropogenic influence. Therefore two unpolluted watersheds in the Cordillera de Piuchué of southern Chile (42 °30 S) were chosen for detailed ecosystem analysis. The goals of this study were to quantify the distribution of the living biomass in the research watershed and to document topographic gradients in the vegetation. Across a small spatial gradient from ravine bottom to ridgetop (approximately 60 m in elevation and < 300 m in length) in the Cordillera de Piuchué watersheds, there were significant shifts in vegetation composition, structure, and biomass. Based on sampling in 18, 100 m² plots, we identified three distinct community associations: a Fitzroya forest at the bottom of the watershed, a mid-slope Pilgerodendron-Tepualia transition zone, and a ridgetop moorland community. The Fitzroya forest was dominated by a cohort of approximately 400 year-old Fitzroya cupressoides trees. Both tree basal area (138 m²/ha) and total live biomass (656 Mg ha^–1) reached a maximum in this vegetation type. The Pilgerodendron-Tepualia forest consisted of smaller, shorter, and younger trees with dominance shared by Pilgerodendron uviferum, Tepualia stipularis, and to a lesser extent, F. cupressoides. Basal area and biomass were half that of the Fitzroya forest (69.5 m² ha^–1; 350 Mg ha^–1) but tree density was 65% greater. The moorland can best be described as an open community of mosses and cushion plants that included low stature individuals of P. uviferum, F. cupressoides, and T. stipularis. The size and age structure of F. cupressoides in the bottomland forest suggest that the current cohort of adult trees was established following a catastrophic disturbance and that F. cupressoides is unable to regenerate under its own canopy. In contrast, the size structure of the tree populations in the Pilgerodendron-Tepualia zone indicates that all the constituent tree species, except F. cupressoides, are able to reproduce at least at some microsites in the understory. The watershed-level means for live biomass were 306 Mg ha^–1 of aboveground tree biomass, 25 Mg ha^–1 of large root biomass (diameter ge 1 cm), and 46 Mg ha^–1 of small root biomass (diameter < 1 cm).     

杉木与伴生植物凋落物混合分解的相互作用研究

通过对杉木与9种伴生植物凋落物混合分解特征比较研究表明,8种植物对杉木凋落物的分解均有不同程度的促进作用,其中观音座莲对杉木凋落物分解的促进最大,而木荷对杉木凋落物分解的影响则表现出先有一定程度的促进而后又有微弱的抑制作用,促进大小表现出观音座莲＞杜茎山＞三龙爪＞狗脊＞苎麻＞丝栗栲＞闽粤栲＞芒萁。杉木 落物反过来对木荷和闽粤栲凋落物有一些抑制作用,而对丝栗栲则有一些促进作用,但这种相互作用未达到显著差异水平。说明杉木与某些伴生植物种类的凋落物在混合分解过程中存在着相互作用的现象,因此,合理保护和恢复林下植物对加快杉木人工林生态系统的养分循环和地力维护具有重要的意义。     

High‐Throughput DNA sequencing of ancient wood

Reconstructing the colonization and demographic dynamics that gave rise to extant forests is essential to forecasts of forest responses to environmental changes. Classical approaches to map how population of trees changed through space and time largely rely on pollen distribution patterns, with only a limited number of studies exploiting DNA molecules preserved in wooden tree archaeological and subfossil remains. Here, we advance such analyses by applying high‐throughput (HTS) DNA sequencing to wood archaeological and subfossil material for the first time, using a comprehensive sample of 167 European white oak waterlogged remains spanning a large temporal (from 550 to 9,800 years) and geographical range across Europe. The successful characterization of the endogenous DNA and exogenous microbial DNA of 140 (~83%) samples helped the identification of environmental conditions favouring long‐term DNA preservation in wood remains, and started to unveil the first trends in the DNA decay process in wood material. Additionally, the maternally inherited chloroplast haplotypes of 21 samples from three periods of forest human‐induced use (Neolithic, Bronze Age and Middle Ages) were found to be consistent with those of modern populations growing in the same geographic areas. Our work paves the way for further studies aiming at using ancient DNA preserved in wood to reconstruct the micro‐evolutionary response of trees to climate change and human forest management.     

凉水自然保护区松鼠的越冬行为策略

在2006 年冬季预观察的基础上,于2007 年10 月31 日至2008 年3 月25 日在40 hm2 范围内使用无线电颈圈和彩色塑料颈圈标记8 只松鼠。结合无线电追踪技术和雪地痕迹技术,采用目标取样法对凉水自然保护区冬季松鼠行为进行了连续21 周的定位观察,以研究松鼠行为节律、空间行为和重取行为对冬季低温条件的响应。结果表明,松鼠冬季的活动节律为单峰型,随着气温的下降显著延后出巢时间(Kendall τ test;n = 21,r =- 0.92,τ = - 0.86,P < 0. 0001), 缩短活动时长(Kendall τ test; n = 21,r =0.80,τ = 0.68,P <0.0001)。松鼠冬季家域近似椭圆形(面积2.46 ±0.09 hm² ), 未见个体间家域重叠。秋季松鼠将红松种子分散贮藏于整个家域范围内,但重取行为相对集中于几个主要区域(重取区)。依据巢和重取区的位置特征及其利用率可将家域划分为3 个部分:主区位于家域的中段,辅区靠近红松母树林,次辅区位于家域远离红松母树林一侧。贮藏的红松种子是松鼠冬季唯一的食物来源。在冬季的不同阶段,松鼠对不同重取区的利用率显著不同(初冬,Kruskal-
Wallis test;df = 2, x² = 5.65, P = 0.0594; 隆冬,Kruskal-Wallis test;df = 2,x² = 14.24, P = 0.0008; 晚冬,One-Way ANOVA Test,df = 2,18, F = 7.00,P = 0.0056), 位于主区(初冬利用率37.8 ± 7.7% ,隆冬利用率80.5 ±9.2% ,晚冬利用率40.5 ±2.7% )和辅区(初冬利用率41.8 ± 5.9% ,隆冬利用率14.8 ± 9.2% ,晚冬利用率37.8 ± 4.9% )的重取区是松鼠的主要重取区。随着时间推移空取率显著提高(Kruskal-Wallis test;df = 2,x² = 16.60,P = 0.0002)的现象提示松鼠很可能依靠空间记忆取回贮藏的食物。轮换利用多个巢(6 ± 1)有助于降低松鼠被天敌捕食的风险。这些巢都分布在重取区附近,巢的利用与重取区的利用显著相关(Kendall τ test;主区:n = 217,r = 0.79,τ = 0.6256,P = 0.0003;辅区:n = 171,r = 0.67,τ = 0.6186,P = 0.0006;次辅区:n = 88,r = 0.74,τ = 0.6565,P = 0.0006),松鼠通常取食后即直接进入就近的巢过夜,有助于松鼠减少
能量损耗。多域集中重取及相应的巢轮换策略是松鼠对冬季低温环境及天敌捕食压力的综合响应。     

Synthesis, spectroscopic characterization and structural studies of mixed ligand complexes of Sr(II) and Ba(II) with 2-hydroxybenzophenone and salicylaldehyde, hydroxyaromatic ketones or β-diketones: Crystal structure of 2-HOC6H4C(O)C6H5

Reactions of Sr(II) and Ba(II) chlorides with 2-hydroxybenzophenone and salicylaldehyde, hydroxyaromatic ketones or β-diketones in 1:1:1 molar ratios have resulted in the formation of mixed ligand complexes of the type [MLL′(H₂O)₂] (M = Sr(II) or Ba(II); HL = 2-hydroxybenzophenone and HL′ = salicylaldehyde, 2-hydroxyacetophenone, 2-hydroxypropiophenone, pentane-2,4-dione, 1-phenylbutane-1,3-dione or 1,3-diphenylpropane-1,3-dione). These complexes have been characterized by elemental analyses, TLC, IR and ¹H NMR spectroscopy.     

Social perspectives on the use of reference conditions in restoration of fire‐adapted forest landscapes

As approaches to ecological restoration become increasingly large scale and collaborative, there is a need to better understand social aspects of restoration and how they influence land management. In this article, we examine social perspectives that influence the determination of ecological reference conditions in restoration. Our analysis is based on in‐depth interviews with diverse stakeholders involved in collaborative restoration of fire‐adapted forest landscapes. We conducted interviews with 86 respondents from six forest collaboratives that are part of the U.S. Forest Service's Collaborative Forest Landscape Restoration Program. Collaboratives use a variety of approaches to develop reference conditions, including historic, contemporary, and future scenarios. Historical conditions prior to European settlement (nineteenth century or “pre‐settlement” conditions), or prior to more recent grazing, logging, and exclusion of fire, were the predominant type of reference used in all sites. Stakeholders described benefits and limitations of reference conditions. Primary benefits include (1) providing a science‐based framework for bringing stakeholders together around a common vision; (2) gaining social understanding and acceptance of the underlying need for restoration; and (3) serving to neutralize otherwise value‐laden discussions about multiple, sometimes competing, resource objectives. Limitations stem from (1) concerns over social conflict when reference conditions are perceived to contradict other stakeholder values and interests, (2) differing interpretations of reference condition science, (3) inappropriate application or over‐generalization of reference information, and (4) limited relevance of historical references for current and future conditions in some ecosystems. At the same time, collaboratives are adopting innovative strategies to address conceptual and methodological limitations of reference conditions.     

Growth of ectomycorrhizal mycelia and composition of soil microbial communities in oak forest soils along a nitrogen deposition gradient

Deciduous forests may respond differently from coniferous forests to the anthropogenic deposition of nitrogen (N). Since fungi, especially ectomycorrhizal (EM) fungi, are known to be negatively affected by N deposition, the effects of N deposition on the soil microbial community, total fungal biomass and mycelial growth of EM fungi were studied in oak-dominated deciduous forests along a nitrogen deposition gradient in southern Sweden. In-growth mesh bags were used to estimate the production of mycelia by EM fungi in 19 oak stands in the N deposition gradient, and the results were compared with nitrate leaching data obtained previously. Soil samples from 154 oak forest sites were analysed regarding the content of phospholipid fatty acids (PLFAs). Thirty PLFAs associated with microbes were analysed and the PLFA 18:2ω6,9 was used as an indicator to estimate the total fungal biomass. Higher N deposition (20 kg N ha⁻¹ y⁻¹ compared with 10 kg N ha⁻¹ y⁻¹) tended to reduce EM mycelial growth. The total soil fungal biomass was not affected by N deposition or soil pH, while the PLFA 16:1ω5, a biomarker for arbuscular mycorrhizal (AM) fungi, was negatively affected by N deposition, but also positively correlated to soil pH. Other PLFAs positively affected by soil pH were, e.g., i14:0, a15:0, 16:1ω9, a17:0 and 18:1ω7, while some were negatively affected by pH, such as i15:0, 16:1ω7t, 10Me17:0 and cy19:0. In addition, N deposition had an effect on the PLFAs 16:1ω7c and 16:1ω9 (negatively) and cy19:0 (positively). The production of EM mycelia is probably more sensitive to N deposition than total fungal biomass according to the fungal biomarker PLFA 18:2ω6,9. Low amounts of EM mycelia covaried with increased nitrate leaching, suggesting that EM mycelia possibly play an important role in forest soil N retention at increased N input.     

Regulating Ecosystem Services of forests in ten Italian Metropolitan Cities: Air quality improvement by PM10 and O3 removal

Urban and periurban forests, which are integrated within the concept of Green Infrastructure, provide important Ecosystem Services, including air purification. In this study, we quantified the Ecosystem Service of particulate matter (PM₁₀) and Ozone (O₃) removal from urban and periurban forests in ten metropolitan cities in Italy, and its total monetary value. In order to gain a better understanding of how Ecosystem Services can be regulated on a wider scale, the vegetation ecosystem types were grouped into Physiognomic-Structural Categories of Vegetation according to morphofunctional criteria. The pollution removal was mapped using a remote sensing and GIS approach, by applying a deposition model and a stomatal flux model. We estimated, for the ten metropolitan cities, an overall pollution abatement of 7150 Mg of PM₁₀ and 30,014 Mg of O₃ in the year 2003, which was an extremely hot year. Our findings indicate that structural characteristics (i.e. Leaf Area Index) and functional diversity, linked to stomatal conductance, exert a marked influence on the provision of the regulating Ecosystem Services, whose total monetary value was estimated to be equal to 47 and 297 million USD for PM₁₀ and O₃ removal, respectively. This study represent the first national-scale assessment of the Ecosystem Services of air pollution removal in Europe, thus providing information that may be useful to stakeholders to manage Green Infrastructure more efficiently.