Establishment of a replication fork barrier following induction of DNA binding in mammalian cells

Understanding the mechanisms that lead to replication fork blocks (RFB) and the means to bypass them is important given the threat that they represent for genome stability if inappropriately handled. Here, to study this issue in mammals, we use integrated arrays of the LacO and/or TetO as a tractable system to follow in time a process in an individual cell and at a single locus. Importantly, we show that induction of the binding by LacI and TetR proteins, and not the presence of the repeats, is key to form the RFB. We find that the binding of the proteins to the arrays during replication causes a prolonged persistence of replication foci at the site. This, in turn, induces a local DNA damage repair (DDR) response, with the recruitment of proteins involved in double-strand break (DSB) repair such as TOPBP1 and 53BP1, and the phosphorylation of H2AX. Furthermore, the appearance of micronuclei and DNA bridges after mitosis is consistent with an incomplete replication. We discuss how the many DNA binding proteins encountered during replication can be dealt with and the consequences of incomplete replication. Future studies exploiting this type of system should help analyze how an RFB, along with bypass mechanisms, are controlled in order to maintain genome integrity.     

A new Middle Devonian gasterocomid crinoid from central Turkey and revision of the Gasterocomidae

A juvenile cup, disarticulated arm plates, and columnals of the crinoid Arachnocrinus sarizensis n. sp. are described from the Eastern Taurus Mountains of central Turkey. This is the first Paleozoic crinoid based on a cup and arm plates reported from Turkey. Suggested revision of the Gasterocomidae includes transfer of Arachnocrinus and Ancyrocrinus to the family and rejection of Kopficrinus from the family. The stratigraphic range of Arachnocrinus is extended upward into the Middle Devonian from the Early Devonian. The Devonian of Turkey is of special interest because it includes Laurasian and Gondwanan components on different tectonic blocks. The paleogeographic range of Arachnocrinus is extended from the North American plate onto the Anatolian block, which would have been located on the southern edge of the Paleotethys Sea in the Middle Devonian in a shelf basin off the northern coast of Gondwana at approximately 42° south latitude.     

Cold-sensitive mutants of p34cdc2 that suppress a mitotic catastrophe phenotype in fission yeast.

Summary The p34^cdc2 protein kinase plays a central role in the regulation of the eukaryotic cell cycle, being required both in late G1 for the commitment to S-phase and in late G2 for the initiation of mitosis. p34^cdc2 also determines the precise timing of entry into mitosis in fission yeast, where a number of gene produts that regulate p34^cdc2 activity have been identified and characterised. To investigate further the mitotic role of p34^cdc2 in this organism we have isolated new cold-sensitive p34^cdc2 mutants. These are defective only in their G2 function and are extragenic suppressors of the lethal premature entry into mitosis brought about by mutating the mitotic inhibitor p107^wee1 and overproducing the mitotic activator p80^cdc25. One of the mutant proteins p34^cdc2-E8 is only functional in the absence of p107^wee1, and all the mutant strains have reduced histone H1 kinase activity in vitro. Each mutant allele has been cloned and sequenced, and the lesions responsible for the cold-sensitive phenotypes identified. All the mutations were found to map to regions that are conserved between the fission yeast p34^cdc2 and functional homologues from higher eukaryotes.     

Themet1 mutation inChlamydomonas reinhardtii causes arrest at mitotic metaphase with persisting p34cdc2-like H1 histone kinase activity that can promote mitosis when injected into higher-plant cells

Summary Themet1 mutation inChlamydomonas reinhardtii causes metaphase arrest. Arrested cells have disassembled cortical microtubules, a fully assembled spindle, condensed and aligned metaphase chromosomes and abundant mitotic phosphoproteins recognised by MPM-2 antibody in the nuclear region. Protein purified by affinity for the mitotic protein p13^suc1 contains p34^cdc2-like H1 histone kinase activity at times when control cells have inactivated this enzyme. The active enzyme, when microinjected intoTradescantia stamen hair cells, accelerated progress through prophase to normal completion of mitosis, indicating that the mutation did not disable the mitotic Cdc2 protein kinase enzyme complex. The mutation prevented the normal lowering of this kinase activity that accompanies anaphase. A defect at time of mitosis rather than earlier in the cycle was indicated by temperature shifting of synchronous cells, which identified the earliest faulty progress as occurring near the beginning of mitosis and the time at which the essential function is completed near the end of mitosis. Themet1 gene mapped approximately 33 cM fromery-2 and extended the known limits of the linkage group XIV.     

Allium cepa assay based comparative study of selected vegetables and the chromosomal aberrations due to heavy metal accumulation

Irrigation of industrial effluents may end in the bioaccumulation of various toxic metals and consequent genetic changes in contaminated food crops. To test this hypothesis and extent of genetic modifications, Allium cepa test was performed to food crops viz. tomato (Lycopersicum esculentum) and chili (Capsicum annum) as Allium cepa test is a useful tool to assess genetic variations in plants. Prior to A. cepa test, the plants were exposed to various metal concentrations 125–1000 mg/L in the synthetic wastewater. The extracts of harvested plants were used to grow the root of A. cepa following its standard method. The root tips were fixed, stained and examined under compound microscope (almost 300–400 dividing cells) to check the extent of chromosomal variations during various stages of mitosis. The results revealed various chromosomal abnormalities including laggards, stickiness, vagrant chromosomes, binucleated cells, nuclear lesions, giant cells and c-mitosis at different level of treatment. On the whole, aberrations were increasing with the increasing doses along the positive control. In comparison, chili crop had higher level of aberrations depicting the higher chromosomal changes. Lower mitotic index (MI) with increasing level of doses was also describing the hampered cell division due to increased metal stress. The study is showing that the cell division was ceased with increasing metal stress thus increasing the rate of cell aberrations.     

Ichnological and Sedimentological Characteristics of Submarine Fan-Delta Deposits in a Half-Graben,Lower Cretaceous Palnatokes Bjerg Formation,NE Greenland

Fault-scarp related fan deltas developed in tilted half grabens in NE Greenland during late Jurassic—early Cretaceous rifting. This study documents ichnological and sedimentological characteristics of the Lower Cretaceous interval of a submarine fan-delta succession (Palnatokes Bjerg Formation, Wollaston Forland), which represents a time of waning rift activity and transgression. For this purpose, two variably exposed ca. 150 m-thick sections were studied ～10 km from the coeval fault scarp, near the axis of the most proximal fault block. Moreover, an additional ～20 m thick coeval succession was studied in the next fault block ～20 km from the coastline defining fault. The results indicate deposition on the basin floor, in the distal fan and in a mid-fan channel-overbank/splay complex of a subaqueous fan delta. The deposits are characterized mainly by various facies of high and low density turbidity currents, hybrid event beds, and transitional flow facies that grade upward into sediment starved basinal mudstones. The ichnological pattern recorded in these strata is strongly mixed, frequently containing elements of the impoverished Skolithos, Cruziana, Zoophycos ichnofacies, and more rarely of the Nereites ichnofacies. Characteristic features also include suites dominated by infaunal locomotion and feeding trails (including the “Curvolithus suite”) and the common occurrence of crustacean burrows. The results are indicative of a depositional system resembling a fjord-side delta that differs sedimentologically and ichnologically from many other gravity-flow systems of similar grain-size caliber. The ichnological pattern recorded in these strata is potentially a characteristic feature of the subaqueous fan-deltas in comparable settings, reflecting the distinct basin physiography with an abrupt change in bathymetry, a narrow basin geometry, and environmental stress resulting from unstable physical conditions. The counter slope of the rotated fault block may explain the common signs of flow concentration and abrupt fan termination.     

Improvements in the determination of radionuclide distribution in the analysis of irradiated samples using double-differentiation method

The spatial response of an 8x4 block detector made up of 5.6-mm-wide, 12.9-mm-high, 30-mm-thick individual detector crystals to a collimated line source of 511 keV annihilation photons was examined. The response of each crystal showed a spread around the average positioning values and distributions from adjacent crystals overlapped as the collimated source scanned the individual detectors. This leads to possible errors in the event assignment. The implementation of double differentiation or the second derivative method was proposed for the removal of scattered photons so as to reduce the overlap and, hence, avoid mispositioning. This method is a mathematical solution implemented when analysing the results. A curve in a spatial spectrum could be considered to be a function f(x), wherex is the position. When double differentiation of f(x) is carried out, then the normalized curve d²f(x) appears with some reduction in the wings. It was shown that a reduction of the scattering contribution in the tails without overestimating the contribution of scattered events could be achieved by implementing a double-differentiation process.     

2021 PACES expert consensus statement on the indications and management of cardiovascular implantable electronic devices in pediatric patients

In view of the increasing complexity of both cardiovascular implantable electronic devices (CIEDs) and patients in the current era, practice guidelines, by necessity, have become increasingly specific. This document is an expert consensus statement that has been developed to update and further delineate indications and management of CIEDs in pediatric patients, defined as ≤21 years of age, and is intended to focus primarily on the indications for CIEDs in the setting of specific disease categories. The document also highlights variations between previously published adult and pediatric CIED recommendations and provides rationale for underlying important differences. The document addresses some of the deterrents to CIED access in low- and middle-income countries and strategies to circumvent them. The document sections were divided up and drafted by the writing committee members according to their expertise. The recommendations represent the consensus opinion of the entire writing committee, graded by class of recommendation and level of evidence. Several questions addressed in this document either do not lend themselves to clinical trials or are rare disease entities, and in these instances recommendations are based on consensus expert opinion. Furthermore, specific recommendations, even when supported by substantial data, do not replace the need for clinical judgment and patient-specific decision-making. The recommendations were opened for public comment to Pediatric and Congenital Electrophysiology Society (PACES) members and underwent external review by the scientific and clinical document committee of the Heart Rhythm Society (HRS), the science advisory and coordinating committee of the American Heart Association (AHA), the American College of Cardiology (ACC), and the Association for European Paediatric and Congenital Cardiology (AEPC). The document received endorsement by all the collaborators and the Asia Pacific Heart Rhythm Society (APHRS), the Indian Heart Rhythm Society (IHRS), and the Latin American Heart Rhythm Society (LAHRS). This document is expected to provide support for clinicians and patients to allow for appropriate CIED use, appropriate CIED management, and appropriate CIED follow-up in pediatric patients.