Mus in Morocco: a Quaternary sequence of intraspecific evolution

North Africa is an intricate biogeographical region at the crossroads of immigration waves from tropical Africa and Asia. Species confined between various barriers (Atlas Mountains, arid environments such as the Sahara in the south, water masses such as the Mediterranean Sea in the north, and the Atlantic Ocean in the west) were generally forced to adapt locally to environmental changes instead of tracking their habitat by shifting their distribution area. The present study aims at providing first insight into the evolution of the genus Mus, and more specifically of the western Mediterranean species Mus spretus in this area. The study relies on the abundant Late Pleistocene and Middle Holocene fossil assemblage from the El Harhoura 2 cave (Rabat‐Témara, Morocco). This exceptional record was studied using geometric morphometrics applied to first upper and lower molars, constituting the most informative and best preserved fossil remains for such small rodents. Two main issues were addressed. (1) Geometric morphometrics was used to clarify taxonomic status and phylogenetic relationships among fossil and modern species in this area. Morphometric analysis revealed good discrimination of most modern and fossil species but failed to document intermediate forms tracing anagenetic evolution. Not mutually exclusive, the occurrence of complex processes of morphological evolution in this genus such as parallel evolution and the action of stabilizing selection may make it difficult to translate patterns of morphological evolution into phylogenetic conclusions. (2) The record was shown to document a sequence of intraspecific evolution of M. spretus. The morphology of the molars through the fossil record of El Harhoura 2 was surprisingly stable despite extensive modern variation. The limited temporal variation largely failed to correlate to palaeoenvironmental proxies. The mouse fossil record at El Harhoura 2 thus presents an intriguing case of morphological stasis despite extensive environmental changes. This long‐term stability may have been recently perturbed by anthropogenic factors including landscape changes and introduction of various competitors and predators, leading to a size reduction. © 2013 The Linnean Society of London, Biological Journal of the Linnean Society, 2013, 109 , 599–621.     

Vegetational stability and rare species from Early Holocene Lewis

Summary

Strata of complex geomorphological origin at Skigersta in the northeast of the Isle of Lewis include organic sediments which have provided a detailed pollen profile and two Early Holocene radiocarbon dates. These two sources of evidence suggest that a stable, pre-woodland, species-rich grass and sedge landscape may have existed for at least one thousand radiocarbon years (10,250 to 9250 BP). Included in the pollen taxa are Koenigia islandica and Polemonium caeruleum, neither of which is now native to Lewis. The former was present in the Middle Devensian (c. 30 kyr BP), perhaps hinting at survival in a local refugium during the Late Devensian glaciation.     

Long‐term Spatial Changes in the Distribution of the Brazilian Atlantic Forest

The aim of this study is to represent simultaneously changes in the spatial distribution of the Atlantic forest during the last 17,000 years. To characterize such changes, here we focused on three different forest physiognomies, evergreen, semi‐deciduous, and Araucaria, and we provide a list of indicator taxa for each class retrieved from the original published datasets. A review of the published fossil pollen records allowed us to classify regional behaviors in three main areas of distribution, north of 15°S, between 15° and 23°S and south of 23°S latitude that correspond to three climatic geographical barriers. Statistical probability density function method was used to illustrate changes in forest physiognomies throughout the three distribution areas. We show that the three modern barriers also functioned through the past. Asynchronous patterns of forest physiognomies are linked to an antiphasing pattern of monsoon precipitation between the northern and central area, whereas in the southern area, it is linked to the frequency and intensity of the polar advection in the subtropics. Our results attest to strong climate forcing on forest distribution between the late glacial and the interglacial period. They call into question the common reference to the last glacial maximum as a major (and sometimes as the only) driver of forest‐related vicariance and genetic diversity patterns, but suggest that instead, orbital cycles were the main drivers of the successive expansion/contraction of the Atlantic forest throughout the Quaternary.     

Population differentiation in the context of Holocene climate change for a migratory marine species,the southern elephant seal

Understanding observed patterns of connectivity requires an understanding of the evolutionary processes that determine genetic structure among populations, with the most common models being associated with isolation by distance, allopatry or vicariance. Pinnipeds are annual breeders with the capacity for extensive range overlap during seasonal migrations, establishing the potential for the evolution of isolation by distance. Here, we assess the pattern of differentiation among six breeding colonies of the southern elephant seal, Mirounga leonina, based on mtDNA and 15 neutral microsatellite DNA markers, and consider measures of their demography and connectivity. We show that all breeding colonies are genetically divergent and that connectivity in this highly mobile pinniped is not strongly associated with geographic distance, but more likely linked to Holocene climate change and demographic processes. Estimates of divergence times between populations were all after the last glacial maximum, and there was evidence for directional migration in a clockwise pattern (with the prevailing current) around the Antarctic. We discuss the mechanisms by which climate change may have contributed to the contemporary genetic structure of southern elephant seal populations and the broader implications.     

Response of Amazonian forests to mid-Holocene drought: A model-data comparison

There is a major concern for the fate of Amazonia over the coming century in the face of anthropogenic climate change. A key area of uncertainty is the scale of rainforest dieback to be expected under a future, drier climate. In this study, we use the middle Holocene (ca. 6000 years before present) as an approximate analogue for a drier future, given that palaeoclimate data show much of Amazonia was significantly drier than present at this time. Here, we use an ensemble of climate and vegetation models to explore the sensitivity of Amazonian biomes to mid-Holocene climate change. For this, we employ three dynamic vegetation models (JULES, IBIS, and SDGVM) forced by the bias-corrected mid-Holocene climate simulations from seven models that participated in the Palaeoclimate Modelling Intercomparison Project 3 (PMIP3). These model outputs are compared with a multi-proxy palaeoecological dataset to gain a better understanding of where in Amazonia we have most confidence in the mid-Holocene vegetation simulations. A robust feature of all simulations and palaeodata is that the central Amazonian rainforest biome is unaffected by mid-Holocene drought. Greater divergence in mid-Holocene simulations exists in ecotonal eastern and southern Amazonia. Vegetation models driven with climate models that simulate a drier mid-Holocene (100–150 mm per year decrease) better capture the observed (palaeodata) tropical forest dieback in these areas. Based on the relationship between simulated rainfall decrease and vegetation change, we find indications that in southern Amazonia the rate of tropical forest dieback was ~125,000 km² per 100 mm rainfall decrease in the mid-Holocene. This provides a baseline sensitivity of tropical forests to drought for this region (without human-driven changes to greenhouse gases, fire, and deforestation). We highlight the need for more palaeoecological and palaeoclimate data across lowland Amazonia to constrain model responses.     

From ice age to modern: a record of landscape change in an Andean cloud forest

Aim To investigate the palaeoecological changes associated with the last ice age, subsequent deglaciation and human occupation of the central Andes. Location Lake Pacucha, Peruvian Andes (13°36′26″ S, 73°19′42″ W; 3095 m elevation). Methods Vegetation assemblages were reconstructed for the last 24 cal. kyr bp (thousand calibrated ¹⁴C years before present), based on pollen analysis of sediments from Lake Pacucha. An age model was established using ¹⁴C accelerator mass spectrometry dates on bulk sediment. Fossil pollen and sedimentological analyses followed standard methodologies. Results Puna brava replaced the Andean forest at the elevation of Lake Pacucha at the Last Glacial Maximum (LGM). Deglaciation proceeded rapidly after 16 cal. kyr bp , and near‐modern vegetation was established by c. 14 cal. kyr bp . The deglacial was marked by the range expansion of forest taxa as grassland taxa receded in importance. The mid‐Holocene was marked by a lowered lake level but relatively unchanged vegetation. Quinoa and maize pollen were found in the latter half of the Holocene. Main conclusions Temperatures were about 7–8 °C colder than present at this site during the LGM. The pattern of vegetation change was suggestive of microrefugial expansion rather than simple upslope migration. The mid‐Holocene droughts were interrupted by rainfall events sufficiently frequent to allow vegetation to survive largely unchanged, despite lowering of the lake level. Human activity at the lake included a 5500‐year history of quinoa cultivation and 3000 years of maize cultivation.     

Late Pleistocene and Holocene pollen stratigraphy at Lago di Vico, central Italy

A new pollen record from Lago di Vico (core V1) provides fundamental new information towards reconstruction of flora and vegetation history in central Italy during the last 90 000 years. The chronological framework is secured by seventeen AMS¹⁴C dates, one⁴⁰Ar/³⁹Ar date and tephra analyses. At the base of the pollen record, i.e. shortly after the⁴⁰Ar/³⁹Ar date 87 000±7000 B.P., three phases with significant expansion of trees are recorded in close succession. These forest phases, which stratigraphically correspond to St Germain II (and Ognon?) and precede pleniglacial steppe vegetation, are designated by the local names Etruria I, Etruria II and Etruria III. During the pleniglacial, a number of fluctuations of angiosperm mesophilous trees suggest the presence of tree refugia in the area. The lowest pollen concentration values are recorded at ca. 22 000 B.P. which corresponds with other pollen records from the region. The late-glacial is characterized by an expansion in the arboreal pollen curves that is less pronounced, however, than in other pollen profiles from Italy. The Holocene part of the profile is consistently dominated by deciduous oak pollen. No major changes in arboreal pollen composition are recorded but several marked and sudden declines of the tree pollen concentration suggest that the forest cover underwent dramatic changes. Clear evidence for human impact is recorded only when cultivated crops became important which dates to ca. 2630±95 B.P.     

Vegetation of the Lago de Sanabria area (NW Iberia) since the end of the Pleistocene: a palaeoecological reconstruction on the basis of two new pollen sequences

Various pollen sequences from lacustrine deposits close to Lago de Sanabria (NW Iberia) have for several decades been a key source of information for palaeoenvironmental reconstructions of SW Europe, though their interpretation has been the subject of some controversy. Here we present two new pollen sequences obtained from this area, and a new palaeoenvironmental reconstruction of the region. The available pollen data reach back to before 18,000 b.p., a period of very harsh climate with seasonal (non continuous) sedimentation and a landscape characterised by herbaceous formations dominated by Gramineae and Artemisia, and scrub formations dominated by Ericaceae and Cistaceae. Subsequently sedimentation became continuous, and various regional forest expansions are apparent. At a local level, the first forest expansion began about 12,000 b.p., when Betula pollen reached 70% followed by peaks in Pinus sylvestris-type (>80%) and Quercus robur-type (40%). The Younger Dryas saw a retreat of woodland formations in the area around the lake, with broadleaved deciduous woodland (largely oak) retreating at mid and low altitudes, but with pine woodland persisting in more sheltered sites. The climatic improvement in the Early Holocene favoured re-expansion of woodland, dominated by Pinus sylvestris-type at higher and Quercus robur and Q. pyrenaica at lower altitudes, until anthropogenic deforestation commenced around 4,000 b.p. The disappearance of natural pine woodlands in this region is probably largely attributable to human interference.     

Lateglacial and Holocene vegetation history in the mountain range of central Pyrenees

We present the pollen analysis of a new sedimentary sequence taken at La Pouretère ( 1720 m), in the mountain vegetation zone of the Marcadau valley (central Pyrenees). The Lateglacial and Holocene chronology is supported by six 14C-dating results. The complementary analysis of some vegetal macroremains, stomata, pollen-clusters and the use of pollen influx allows us to elucidate the dynamic of mountain species such as Pinus and specially Abies but also to infer the unusual part played by Betula at the beginning of the Postglacial period.