Stature of sub-arctic birch in relation to growth rate, lifespan and tree form

BACKGROUND AND AIMS: Sub-arctic mountain birch Betula pubescens var. pumila communities in the North Atlantic region are of variable stature, ranging from prostrate scrubs to forests with trees up to 12 m high. Four hypotheses were tested, relating growth and population characteristics of sub-arctic birch woodland and scrub to tree stature; i.e. the variable stature of birch woods is due to differences in (1) the mean growth rate; (2) the age-related patterns of growth rate; (3) the life expectancy of stems; or (4) the tree form. Methods: A stratified random sample of 300 birch trees was drawn from the total population of indigenous birch woodlands and scrub in Iceland, yielding 286 valid sample genets. The population was divided into three sub-populations with dominant trees 0-2, 2-4 and 4-12 m tall, referred to as birch scrub, birch scrub-woodland and birch forest, respectively. KEY RESULTS: Trees in the scrub population were of more contorted growth form than birch in the scrub-woodland and forest populations. Mean growth rates, mean age and median life expectancies increased significantly with sub-population of greater tree stature. At the population level, annual increment and longevity of birch stems was apparently interrelated as the stems in vigorously growing birch sub-populations had a longer life expectancy than those of slower growth. However, no difference was observed between sub-populations in age-related patterns of extension growth rate. CONCLUSIONS: The results were consistent with hypotheses (1), (3) and (4), but hypothesis (2) was rejected. Hence, mountain birch of more vigorous growth attains a greater stature than birch of lesser increment due to faster extension growth rate and a longer lifespan. In addition, the more contorted stem form of scrub populations contributes to their low stature.     

Anion induced conformational preference of CαNN motif residues in functional proteins

Among different ligand binding motifs, anion binding C^αNN motif consisting of peptide backbone atoms of three consecutive residues are observed to be important for recognition of free anions, like sulphate or biphosphate and participate in different key functions. Here we study the interaction of sulphate and biphosphate with C^αNN motif present in different proteins. Instead of total protein, a peptide fragment has been studied keeping C^αNN motif flanked in between other residues. We use classical force field based molecular dynamics simulations to understand the stability of this motif. Our data indicate fluctuations in conformational preferences of the motif residues in absence of the anion. The anion gives stability to one of these conformations. However, the anion induced conformational preferences are highly sequence dependent and specific to the type of anion. In particular, the polar residues are more favourable compared to the other residues for recognising the anion.     

作物多样性对大豆蚜的控蚜效应

【目的】研究大豆蚜发生为害及大豆与多种作物间邻作种植对大豆蚜的控制作用,为大豆蚜的可持续综合治理提供理论依据。【方法】采用系统调查的方法,研究大豆蚜和天敌田间种群动态;通过田间罩笼、人工接蚜和释放天敌的方法,研究捕食性天敌对大豆蚜种群的控制作用;在佳木斯地区进行大豆与早熟马铃薯间作,牡丹江地区进行黄瓜-大豆-玉米、甜葫芦-大豆-玉米、烟草-大豆-香瓜、甜菜-大豆-玉米等多作物带状穿插种植模式,以单作大豆田为对照,对不同种植模式的大豆田大豆蚜与天敌进行调查,研究作物多样性对大豆蚜的控制作用。【结果】2009年6月中下旬大豆蚜开始侵入大豆田,3~5周后田间有蚜株率达到100%,大豆蚜种群发生高峰期在7月下旬至8月上旬,9月上旬在田间逐渐消失。草蛉、瓢虫和寄生蜂等为蚜虫天敌优势种;按大豆蚜与天敌数量之比700︰1,释放异色瓢虫和叶色草蛉成虫7 d后,蚜虫种群减退率分别为54.78%和78.79%;大豆与早熟马铃薯间作,在大豆蚜种群迅速增长期早熟马铃薯收获(7月20日)后第5天,豆田蚜虫天敌总数是收获前的2.6倍,与同期单作大豆田相比,间作田大豆蚜种群数量降低了51.3%。大豆与甜葫芦、香瓜、烟草和玉米等作物进行多样性间作种植,在大豆蚜田间发生高峰期,单作豆田益害比为1︰65.2,多样性种植区的大豆田益害比为1︰26~1︰42,与单作大豆田相比,间作田大豆蚜种群数量降低40.7%~83.5%。【结论】2009年大豆蚜的种群高峰期为8月3日,田间的天敌优势种类为草蛉、瓢虫和寄生蜂。早熟马铃薯与大豆间作,在大豆蚜种群迅速增长期间收获早熟马铃薯,大量蚜虫天敌转移至间作的大豆田,从而形成对大豆蚜的控制。大豆与其它经济作物间邻作,大豆田天敌昆虫与蚜虫的益害比明显提高,表明利用农田作物多样性能充分发挥自然天敌的生物控害作用。     

Effect of follicular wave stage on potential fertility predictors and their repeatability coefficient in prepubertal Bos indicus (Nellore) and Bos taurus (Caracu) heifers

In an attempt to develop accessible methods for the precocious individual selection based on phenotypic attributes related to reproductive superiority, this study evaluated the effects of follicular wave stages (emergence and dominance) and the repeatability coefficients of potential fertility predictors (vulvar morphometry, uterine biometry, echogenicity and echotexture, ovarian biometry, and antral follicle count – AFC) in two breeds of purebred prepubertal heifers. Nellore (n = 30) and Caracu (n = 28) heifers were submitted to a sequence of 11 evaluations conducted every 48 h (D0 – random day of the antral follicular wave until D20) to study potential fertility indicators under natural conditions. The data obtained were compared according to breed and follicular wave stage. Statistical analysis included the fixed effects of breed, evaluation day, and their statistical interaction and was performed using MIXED, GENMOD, GLM, and CORR procedures of the SAS program. Breed was found to influence rima height, ovarian area, and AFC, which were greater in Nellore heifers (P < 0.02). The follicular wave stage also influenced most of the potential predictors, highlighting AFC which was higher in the presence of a dominant follicle in both breeds (P < 0.0001). The repeatability coefficients for vulvar width (0.76 and 0.66), ovarian area (0.70 and 0.62), and AFC (0.76 and 0.74) were considered to be high in Nellore and Caracu heifers, respectively. Only ovarian biometry was able to predict AFC (Pearson correlation coefficient ≥ 0.66; P < 0.0001) in prepubertal heifers. The results indicate that most of the phenotypic reproductive parameters analyzed can be characterized throughout prepuberty using a single measure since they are intrinsic attributes of the individual.     

Phosphorylation tunes elongation propensity and cohesiveness of INCENP’s intrinsically disordered region

The inner centromere protein, INCENP, is crucial for correct chromosome segregation during mitosis. It connects the kinase Aurora B to the inner centromere allowing this kinase to dynamically access its kinetochore targets. However, the function of its central, 440-residue long intrinsically disordered region (IDR) and its multiple phosphorylation sites is unclear. Here, we determined the conformational ensemble of INCENP’s IDR, systematically varying the level of phosphorylation, using all-atom and coarse-grain molecular dynamics simulations. Our simulations show that phosphorylation expands INCENP’s IDR, both locally and globally, mainly by increasing its overall net charge. The disordered region undergoes critical globule-to-coil conformational transitions and the transition temperature non-monotonically depends on the degree of phosphorylation, with a mildly phosphorylated case of neutral net charge featuring the highest collapse propensity. The IDR transitions from a multitude of globular states, accompanied by several specific internal contacts that reduce INCENP length by loop formation, to weakly interacting and highly extended coiled conformations. Phosphorylation critically shifts the population between these two regimes. It thereby influences cohesiveness and phase behavior of INCENP IDR assemblies, a feature presumably relevant for INCENP’s function in the chromosomal passenger complex. Overall, we propose the disordered region of INCENP to act as a phosphorylation-regulated and length-variable component, within the previously defined “dog-leash” model, that thereby regulates how Aurora B reaches its targets for proper chromosome segregation.     

Paired nonlinear behavior of active and passive joint torques associated with preparation for walk-to-run gait transition

This study investigated the lower extremity torque's active and passive features during the walk-to-run gait transition with continuously increased walking speed. Fourteen volunteers participated in the experiment. Kinematic and kinetic data were collected synchronously. Five strides leading up the gait transition were examined. Peaks of the passive (e.g., contact) and active (e.g., generalized muscle torques), along with net joint torque, and time to peak torques exhibited significant differences at the last stride before gait transition, compared to the first four strides, at the ankle, knee, and hip joints, respectively. Selected peak joint active and passive torques showed significant and opposite trends at critical events within a stride cycle: such ankle joint right after heel-contact, knee joint during weight acceptance, and both hip and knee joints right before toe-off. The magnitude and the corresponding time to active and passive peak torque changed in a nonlinear pattern before the transition from walk to run. The lower extremity segment-interaction during gait transition appeared to be an active reorganization exemplified by the interaction between the lower extremity's active and passive torque components.