Study on microbe retting of kenaf fiber

Retting is the predominant problem in the application of kenaf fiber in high-grade products. While the traditional retting method is water retting, that is, the harvested bast kenaf is immersed in natural water (rivers or tanks) in which indigenous bacteria colonize noncellulosic materials in an anaerobic process resulting in severe environmental problems and low-grade fiber, therefore it is inevitable to seek for a pollution-free or little-pollution retting method. With the more application of biotechnology in textile industry, the more biology-treatments have been researched recently. So microbe retting was employed in this work. The fungus strain was isolated from the river in which kenaf fiber was retted, then microbe retting was performed with this fungus. Substrate species, the initial pH of the culture medium, cultivation temperature, retting time and inoculum size are involved in the experiments and the evaluation of retting is based on the residual gum content in retted kenaf fiber. As a result, the removal of pectin in microbe retting of kenaf is 91.31% under the optimal retting conditions. In addition, the effective retting fungus is also observed with microscope as one kind of filamentous epiphyte.     

A flax-retting endopolygalacturonase-encoding gene from Rhizopus oryzae

A polygalacturonase from the filamentous fungus Rhizopus oryzae strain sb (NRRL 29086), previously shown to be effective in the retting of flax fibers, was shown by the analysis of its reaction products on polygalacturonic acid to be an endo-type. By zymogram analysis, the enzyme in the crude culture filtrate appeared as two active species of 37 and 40 kD. The endopolygalacturonase-encoding gene was cloned in Escherichia coli and its translated 383-amino acid sequence found to be identical to that of a presumed exopolygalacturonase found in R. oryzae strain YM9901 and 96% identical to a hypothetical protein (RO3G_04731.1) in the sequenced genome of R. oryzae strain 99–880. Phylogenetic analysis revealed the presence of an unique cluster of Rhizopus polygalacturonase sequences that are separate from other fungal polygalacturonases. Conservation of 12 cysteines appears to be a special feature of this family of Rhizopus polygalacturonase sequences. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

（超）高压对微生物的影响及其诱变效应探讨

(超)高压对微生物有多方面的影响,它不仅可使微生物细胞体积形态、细胞组分发生变化,还可使微生物的基因表达和核酸结构及其生物学功能发生改变。(超)高压的这些生物学效应,使其不仅可以应用到食品杀菌、保藏及某些加工过程,而且在微生物菌种诱变方面具有很大的应用潜力。这是因为(超)高压既然可以使核酸发生变化,那么它诱导微生物发生突变就很有可能。现从(超)高压对微生物的影响出发,并结合国内外有关实例及作者的研究工作,初步探讨其诱变育种的可行性。     

Effect of some inorganic salts on the partitioning of pectinase of Polyporus squamosus in polyethylene glycol/crude dextran aqueous two-phase system

The effect of two inorganic salts, ammonium sulphate and potassium dihydrogenphosphate, on the partitioning of pectinases produced by Polyporus squamosus in polyethylene glycol/crude dextran aqueous two-phase system is reported. Presence of both salts at different concentration did not affect partition of biomass, so fungal growth was occurring exclusively in the bottom phase. At 30 mmol (NH₄)₂SO₄/l in two-phase medium, the partition coefficient of endo-pectinase was 3.9, and it was 80% improved in comparison to that obtained at twofold lower salt concentration. On the other hand, higher (NH₄)₂SO₄ concentration increased total exo-pectinase activity produced, but did not affect substantially its partition parameters. Increasing phosphate concentration stimulated partition of both enzymes to the top phase: at 0.2 mol KH₂PO₄/l the partition coefficient for exo-pectinase was about 20% higher than at 0.1 mol/l, and one-sided partition of endo-pectinase was accomplished, and consequently maximal top phase yield.     

发酵产鸢尾酮真菌的分离鉴定及生香特性的初步研究*

从陈化的鸢尾根状茎分离到产鸢尾酮的丝状真菌,以其作用于新鲜鸢尾根状茎,通过固体发酵产生了鸢尾酮。其中1株Rhizopusoryzae（94Y－01）表现最好。对培养基配方、培养温度、培养时间等发酵条件进行了报道。从发酵物提取得到的浸膏和凝脂,其理化指标分析及香气嗅评与传统鸢尾酮产品类似,经薄层层析和气相色谱－质谱（GC／MS）分析,表明含有鸢尾酮。     

PCR-DGGE研究微生物种群中多条带产生原因分析

鸡肠道微生物菌群经PCR-DGGE分析,回收PCR-DGGE分析胶上的一条DNA片段,回收的DNA片段再重复进行2次PCR-DGGE分析,以及分别用PCR反复循环扩增和PCR高保真酶扩增后再进行DGGE分析等方法研究PCR-DGGE分析中多条带产生原因。结果显示PCR-DGGE分析中多条带产生原因可能是作PCR扩增模板的DNA混杂有少量其他DNA片段,多条带现象不易被消除。DGGE分析胶上的DNA片段测序时,将该DNA片段回收、PCR扩增后克隆,提取多个阳性克隆菌的质粒DNA片段,分别与其原目的DNA片段进行DGGE分析,在DGGE分析胶上选取与原目的DNA片段处于同一电泳位置的质粒DNA测序,提高测序的准确性。     

微生物细胞表面工程研究进展*

微生物细胞表面工程是近年来发展起来的,它利用细胞表面展示技术使外源蛋白固定化于细胞表面,从而生产微生物细胞表面蛋白。微生物细胞表面工程可用于细胞催化剂、细胞吸附剂、活疫苗、生物传感器的开发等。微生物细胞表面工程具有广阔的应用前景,但是国内对这一领域的研究尚刚起步。在介绍了细胞表面工程的基础上,对微生物细胞表面工程技术进展进行了综述,并对该技术的发展给予展望。     

中高温污泥厌氧消化系统中微生物群落比较

【目的】结合中温与高温消化两者优势的两相厌氧消化工艺可能是推进污泥厌氧消化发展的重要方向,因此,探究和比较中温和高温污泥厌氧消化系统中微生物群落组成的异同具有重要意义。【方法】利用高通量测序技术检测中温和高温厌氧消化系统中细菌与古菌的16S r RNA基因序列信息和真菌的内转录间隔(ITS)序列信息,利用基因芯片(Geo Chip 5.0)检测病毒和病原菌致病基因的信息,以对比中温和高温条件下微生物群落在物种组成和功能基因层面上的异同。【结果】中温和高温条件下细菌和古菌在群落物种组成上存在显著差异,病毒和病原菌毒性基因也显著不同,而两种系统中真菌群落的物种组成相似且丰度相对较低。中温条件下产甲烷古菌和未分类微生物相对丰度较高,而高温条件下产酸及嗜热菌相对丰度较高,且高温消化后病毒和病原菌毒性基因相对丰度下降。微生物群落结构与COD、TS和VS有着显著相关性。【结论】微生物群落组成和功能基因在中高温的污泥厌氧消化系统中显著不同,从而解释了两个系统功能的差异。微生物群落的形成与进水参数相关,说明微生物对进水条件敏感。     

微生物基因组注释系统MGAP

利用生物信息学方法和工具开发了微生物基因组注释系统（Microbial genome annotation package, MGAP）,并用于蓝细菌PCC7002的基因组注释。该系统由基因组注释系统和基于Web的用户接口程序两部分组成。基因组注释系统整合多个基因识别、功能预测和序列分析软件;以及蛋白质序列数据库、蛋白质资源信息系统和直系同源蛋白质家族数据库等。用户接口程序包括基因组环状图展示、基因和开放读码框在染色体上的分布图,以及注释信息检索工具。该系统基于PC微机和Linux操作系统,用MySQL作数据库管理系统、用Apache作Web服务器程序,用Perl脚本语言编写应用程序接口,上述软件均可免费获得。     

微生物果胶酶研究进展

果胶酶是一类分解果胶质的酶的总称,它能将复杂的果胶分解为半乳糖醛酸等小分子。目前果胶酶在食品、纺织、医药、造纸、环境、生物技术、饲料等领域得到广泛应用。果胶酶主要来自微生物。综述了微生物果胶酶生产菌的菌种、选育、鉴定、发酵方法和发酵条件优化,酶的分离纯化、酶学性质和分子生物学方面的研究进展,并介绍了果胶酶的应用进展,最后展望了微生物果胶酶研究的广阔前景。