The impact of climate change on the future distribution of priority crop wild relatives in Indonesia and implications for conservation planning

The analysis of climate change impact is essential to include in conservation planning of crop wild relatives (CWR) to provide the guideline for adequate long-term protection under unpredictable future environmental conditions. These resources play an important role in sustaining the future of food security, but the evidence shows that they are threatened by climate change. The current analyses show that five taxa were predicted to have contraction of more than 30 % of their current ranges: Artocarpus sepicanus (based on RCP 4.5 in both no dispersal and unlimited dispersal scenario and RCP 8.5 in no dispersal scenario by 2050), Ficus oleifolia (RCP 4.5 5 in both no dispersal and unlimited dispersal scenario by 2080), Cocos nucifera and Dioscorea alata (RCP 8.5 in both no dispersal and unlimited dispersal scenario by 2050), and Ficus chartacea (RCP 8.5 in both no dispersal and unlimited dispersal scenario by 2050 and 2080). It shows that the climate change impact is species-specific. Representative Concentration Pathways (RCP) of greenhouse gas (GHG) emission and dispersal scenarios influence the prediction models, and the actual future distribution range of species falls in between those scenarios. Climate refugia, holdout populations, and non-analogue community assemblages were identified based on the Protected Areas (PAs) network. PAs capacity is considered an important element in implementing a conservation strategy for the priority CWR. In areas where PAs are isolated and have less possibility to build corridors to connect each other, such as in Java, unlimited dispersal scenarios are unlikely to be achieved and assisted dispersal is suggested. The holdout populations should be the priority target for the ex situ collection. Therefore, by considering the climate refugia, PAs capacity and holdout populations, the goal of keeping high genetic variations for the long-term conservation of CWR in Indonesia can be achieved.     

Enzyme synthesis of oligosaccharides using cashew apple juice as substrate

The use of agriculture substrates in industrial biotechnological processes has been increasing because of their low cost. In this work, the use of clarified cashew apple juice was investigated as substrate for enzyme synthesis of prebiotic oligosaccharide. The results showed that cashew apple juice is a good source of reducing sugars and can be used as substrate for the production of dextransucrase by Leuconostoc citreum B-742 for the synthesis of oligosaccharides using the crude enzyme. Optimal oligosaccharide yield (approximately 80%) was obtained for sucrose concentrations lower than 60 g/L and reducing sugar concentrations higher than 100 g/L.     

The Role of the N-Terminus of the Myosin Essential Light Chain in Cardiac Muscle Contraction

To study the regulation of cardiac muscle contraction by the myosin essential light chain (ELC) and the physiological significance of its N-terminal extension, we generated transgenic (Tg) mice by partially replacing the endogenous mouse ventricular ELC with either the human ventricular ELC wild type (Tg-WT) or its 43-amino-acid N-terminal truncation mutant (Tg-Δ43) in the murine hearts. The mutant protein is similar in sequence to the short ELC variant present in skeletal muscle, and the ELC protein distribution in Tg-Δ43 ventricles resembles that of fast skeletal muscle. Cardiac muscle preparations from Tg-Δ43 mice demonstrate reduced force per cross-sectional area of muscle, which is likely caused by a reduced number of force-generating myosin cross-bridges and/or by decreased force per cross-bridge. As the mice grow older, the contractile force per cross-sectional area further decreases in Tg-Δ43 mice and the mutant hearts develop a phenotype of nonpathologic hypertrophy while still maintaining normal cardiac performance. The myocardium of older Tg-Δ43 mice also exhibits reduced myosin content. Our results suggest that the role of the N-terminal ELC extension is to maintain the integrity of myosin and to modulate force generation by decreasing myosin neck region compliance and promoting strong cross-bridge formation and/or by enhancing myosin attachment to actin.     

AFLP-derived SCARs facilitate construction of a 1.1 Mb sequence-ready map of a region that spans the Vf locus in the apple genome

The availability of high-density anchored markers is a prerequisite for reliable construction of a deep coverage BAC contig, which leads to creation of a sequence-ready map in the target chromosomal region. Unfortunately, such markers are not available for most plant species, including woody perennial plants. Here, we report on an efficient approach to build a megabase-size sequence-ready map in the apple genome for the Vf region containing apple scab resistance gene(s) by targeting AFLP-derived SCAR markers to this specific genomic region. A total of 11 AFLP-derived SCAR markers, previously tagged to the Vf locus, along with three other Vf-linked SCAR markers have been used to screen two apple genome BAC libraries. A single BAC contig which spans the Vf region at a physical distance of approximately 1,100 kb has been constructed by assembling the recovered BAC clones, followed by closure of inter-contig gaps. The contig is 4 ×deep, and provides a minimal tiling path of 16 contiguous and overlapping BAC clones, thus generating a sequence-ready map. Within the Vf region, duplication events have occurred frequently, and the Vf locus is restricted to the ca. 290 kb region covered by a minimum of three overlapping BAC clones.     

Role of p53/FAK association and p53 phosphorylation in staurosporine-mediated apoptosis: Wild type versus mutant p53-R175H

A novel survival role of focal adhesion kinase (FAK) that involves its nuclear translocation and direct association with p53 has been demonstrated. Here we examined the relationship between the p53/FAK interaction and Ser46 phosphorylation of p53 (p-p53^Ser46) in the apoptotic regulation of human esophageal squamous cell carcinoma (HOSCC) cell lines, expressing either wild type (wt) p53 or mutant (mt) p53-R175H. In contrast to the wt p53 cell lines, the mt p53-R175H cell line was resistant to staurosporine (STS)-mediated detachment and caspase-3 activation. Furthermore, despite the resistance of mt p53-R175H to Ser46 phosphorylation, both wt and mt HOSCC cells translocate FAK into the nucleus and maintain the p53/FAK interaction post STS treatment. These findings provide unique insight into how tumor cells harboring the R175H mutant may resist chemotherapeutic intervention.

Structured summary

MINT-7294020: FAK (uniprotkb:Q05397) physically interacts (MI:0915) with p53 (uniprotkb:P04637) by anti-bait coimmunoprecipitation (MI:0006)     

苹果园中凹唇壁蜂和紫壁蜂的生态位比较研究

本文对凹唇壁蜂Osmia excavata Alfken和紫壁蜂O.jacoti Cockerell的时间、空间、营养和筑巢生态位进行了研究。结果表明,在苹果园内人工释放和管理条件下,两种壁蜂在不同的资源序列上具有不同的生态位宽度、生态位重叠和不同程度的竞争关系。其中在营养上的竞争最为激烈,生态位重叠值和种间竞争系数分别高达0.9690和0.9994。日活动时间生态位竞争次之,其重叠值和种间竞争系数分别为0.7960和0.9350;时间生态位(季节)和空间生态位重叠值则分别为0.6500和0.6710,种间竞争系数为0.8213和0.8234;并且在人工巢管的选择上竞争性最小,生态位重叠值仅为0.4930,种间竞争系数为0.6052。凹唇壁蜂在营养生态位和时间生态位上较高的专一性均表现出其比紫壁蜂对苹果传粉作用更为显著。紫壁蜂在苹果开花后期的传粉作用较强。     

Susceptibility of the summer fruit tortrix moth, Adoxophyes orana (Lepidoptera: Tortricidae), to chlorpyrifos and strategies for insecticidal control in orchards

The susceptibility of populations of the summer fruit tortrix moth, Adoxophyes orana, from apple orchards in Kent, England, to chlorpyrifos was determined in 1992, 1994 and 1995, by topically dosing larvae feeding on leaves or adults adhered to pheromone trap sticky bases. LD₅₀ values (range 6.3 to 23.2 ng chlorpyrifos per individual) for first or second generation males, second generation females or for first generation fourth instar larvae collected in the field were significantly greater (2–3 fold) for populations from orchards with a long history of treatment with broad-spectrum organophosphorous and other insecticides than for those from untreated orchards (range 1.6 to 8.1 ng chlorpyrifos per individual), though there was considerable variation between sites and years. Twelve replicated orchard experiments between 1993 and 1995 were used to examine a range of different strategies for insecticidal control. Applications of chlorpyrifos against overwintered larvae feeding in trusses in spring gave, at best, a 75% reduction in larval numbers, insufficient to prevent damage by the subsequent generation in summer. However, two applications of fenoxycarb (one immediately pre-and one immediately post-blossom of apple cv. Cox) completely prevented successful subsequent development of the pest, and a single (post-blossom) spray nearly so. The timing of application of chlorpyrifos against first generation larvae hatching from eggs in June was shown to be critical and currently used methods of spray-timing were unreliable. The effective persistence of chlorpyrifos was short (< 7 days). Though good control could be achieved with a single spray, a better strategy was to apply a series of sprays at 7-day intervals to cover the egg hatch period. Sprays of Bacillus thuringiensis at the same timing intervals gave, maximally, an 80% reduction in larval numbers, but usually less: improved control was not achieved by applying a programme of sprays compared to a single spray, though a novel, more potent, formulation was significantly more active. Triazophos was also effective as an egg hatch spray. Sprays of chlorpyrifos or tebufenozide between late September and mid-October 1995 against second or third instar larvae migrating to overwintering sites before diapause, failed to reduce significantly the numbers of subsequent overwintering larvae or the numbers that emerged to feed on blossom trusses in spring.     

Use of the multi-allelic self-incompatibility gene in apple to assess homozygocity in shoots obtained through haploid induction

 To obtain homozygous genotypes of apple, we have induced haploid development of either the female or the male gametes by parthenogenesis in situ and anther culture, respectively. Of the shoots obtained, which were mainly of a non-haploid nature, some could be derived from fertilised egg cells or from sporophytic anther tissue. In order to select the shoots having a true haploid origin, and thus homozygotes, we decided to use the single multi-allelic self-incompatibility gene as a molecular marker to discriminate homozygous from heterozygous individuals. The rationale behind this approach was that diploid apple cultivars contain 2 different alleles of the S-gene and therefore the haploid induced shoots obtained from them should have only one of the alleles of the single parent. The parental cultivars used were ‘Idared’ (parthenogenesis in situ) and ‘Braeburn’ (androgenesis), and their S-genotypes were known, except for 1 of the ‘Braeburn’S-alleles. To stimulate parthenogenetic development ‘Idared’ styles were pollinated with irradiated ‘Baskatong’ pollen, the S-alleles of the latter (2n) cultivar were also unknown. The cloning and sequence analysis of these 3 unidentified S-alleles, 1 from ‘Braeburn’ and 2 from ‘Baskatong’ is described, and we show that they correspond to the S ₂₄ -, S ₂₆ - and S ₂₇ -alleles. We have optimised a method for analysis of the S-alleles of ‘Idared/Baskatong’- or ‘Braeburn’-derived in vitro plant tissues and have shown that this approach can be applied for the screening of the in vitro shoots for their haploid origin. Received: 18 August 1997 / Accepted: 10 September 1997     

避雨环境下苹果幼树水分状态指标对干旱胁迫的响应

在避雨环境下进行土壤水势渐进式下降处理,研究了苹果树体水分状态指标对土壤干旱胁迫响应的敏感性,分析了不同水分状态指标与树体水分平衡之间的关系.结果表明: 树干直径日较差(MDS)及中午树干水势(Ψ_stem)对干旱胁迫最敏感.MDS对参考蒸散(ET₀)有明显的响应,且对干旱胁迫比较敏感,与ET₀呈显著正相关,相对树干直径日较差(MDS_r)与相对土壤水势(Ψ_{r soil})呈显著负相关,树干直径可实现连续性测量及自动化记录.Ψ_stem对土壤干旱胁迫较敏感,且与ET₀呈显著负相关,相对中午树干水势(Ψ_{r stem})与Ψ_{r soil}呈显著相关,目前叶水势和树干水势难以实现自动化连续性观测.其他树体水分状态指标,如黎明前叶水势(Ψ_pd)、树干直径日生长量(DG)和气孔导度(g_s)等对中度或重度干旱胁迫也有不同程度的响应,但总体上对土壤水势变化的响应不敏感.