Small effect of fragmentation on the genetic diversity of Dalbergia monticola, an endangered tree species of the eastern forest of Madagascar, detected by chloroplast and nuclear microsatellites

Background and Aims

The oriental forest ecosystem in Madagascar has been seriously impacted by fragmentation. The pattern of genetic diversity was analysed on a tree species, Dalbergia monticola, which plays an important economic role in Madagascar and is one of the many endangered tree species in the eastern forest.

Methods

Leaves from 546 individuals belonging to 18 small populations affected by different levels of fragmentation were genotyped using eight nuclear (nuc) and three chloroplast (cp) microsatellite markers.

Key Results

For nuclear microsatellites, allelic richness (R) and heterozygosity (H_e,nuc) differed between types of forest: R = 7·36 and R = 9·55, H_e,nuc = 0·64 and H_e,nuc = 0·80 in fragmented and non-fragmented forest, respectively, but the differences were not significant. Only the mean number of alleles (N_a,nuc) and the fixation index F_IS differed significantly: N_a,nuc = 9·41 and N_a,nuc = 13·18, F_IS = 0·06 and F_IS = 0·15 in fragmented and non-fragmented forests, respectively. For chloroplast microsatellites, estimated genetic diversity was higher in non-fragmented forest, but the difference was not significant. No recent bottleneck effect was detected for either population. Overall differentiation was low for nuclear microsatellites (F_ST,nuc = 0·08) and moderate for chloroplast microsatellites (F_ST,cp = 0·49). A clear relationship was observed between genetic and geographic distance (r = 0·42 P < 0·01 and r = 0·42 P = 0·03 for nuclear and chloroplast microsatellites, respectively), suggesting a pattern of isolation by distance. Analysis of population structure using the neighbor-joining method or Bayesian models separated southern populations from central and northern populations with nuclear microsatellites, and grouped the population according to regions with chloroplast microsatellites, but did not separate the fragmented populations.

Conclusions

Residual diversity and genetic structure of populations of D. monticola in Madagascar suggest a limited impact of fragmentation on molecular genetic parameters.     

Duetting—A mechanism to strengthen pair bonds in a dispersed pair‐living primate (Lepilemur edwardsi)?

Duetting is defined as an interactively organized pair display in which one pair partner coordinates its vocalizations in time with those of the other. It is widespread among tropical birds and cohesive pair‐living primates, in which it is suggested to strengthen pair bonds. We know very little about the presence and function of duetting in dispersed pair‐living mammals. We studied duetting behavior in a solitary foraging, but pair‐sleeping, primate, the Milne Edwards' sportive lemur, in a dry deciduous forest of north‐western Madagascar. We radio‐tracked six pairs throughout 1 year and recorded their sleeping sites and associations, home‐range use, and vocal and behavioral interactions. Three different periods were covered (mating, pregnancy, and offspring care). Sleeping partners form long‐term pair bonds, indicated by an almost exclusive pair‐specific usage of sleeping sites and home‐ranges across periods. We explored three functional hypothesis of duetting: mate reunion, pair reunion, and joint‐territorial defense. Pairs regularly engaged in duet calling. Duetting increased significantly during the offspring care period. Duetting occurred significantly more often at feeding sites than at sleeping sites. Pair partners synchronized behavioral activities after duetting. The activity most often synchronized was locomotion. Pair partners played an equal role in duetting with no difference between sexes in starting or terminating duetting. Altogether, our results provide support for the hypothesis that in dispersed pair‐living primates, duetting evolved as a mechanism to coordinate activities between pair partners dispersed in space, to strengthen pair bonds, and, perhaps, to limit infanticide and nutritional stress in lactating females. Am J Phys Anthropol, 2009. © 2009 Wiley‐Liss, Inc.     

Patterns of morphological and genetic variation in the endemic Malagasy bat Miniopterus gleni (Chiroptera: Miniopteridae), with the description of a new species, M. griffithsi

Over the past decade, major advances have been made concerning the systematics and species diversity of Malagasy bats, largely based on specimens collected during inventories and associated morphological and molecular genetic studies. Herein we describe a new species of endemic bat from southern Madagascar, Miniopterus griffithsi sp. n . , which is the sister taxa to Miniopterus gleni , a taxon described in 1995 (holotype from Sarodrano, just north of the Onilahy River in the southwest). Based on current information, M. griffithsi is found in the sub-arid bioclimatic zone, south of the Onilahy River, and M. gleni occurs in a variety of different bioclimatic zones, north of the Onilahy River to the northern portion of the island and on the near shore island of Ile Sainte Marie. The realization that M. griffithsi was a separate entity was first based on phylogeographic studies of the M. gleni complex. Comparisons using 397 bp of mitochondrial cytochrome b found a divergence of 1.2% within animals occurring across much of Madagascar north of the Onilahy River, 0.07% in those south of the Onilahy River, and 7.4% in populations separated by this river. Subsequently, morphological characters were identified that supported the specific separation of populations occurring south ( M. griffithsi ) and north of the Onilahy River ( M. gleni ), which include tragus shape, pelage coloration, and skull proportions.     

A revision of the sauropod dinosaur genus ‘Bothriospondylus’ with a redescription of the type material of the Middle Jurassic form ‘B. madagascariensis’

Abstract: The sauropod dinosaur ‘Bothriospondylus’, originally named on the basis of Late Jurassic remains from England, is demonstrated to be invalid, and the characters used to diagnose it are shown to be obsolescent features which are widespread throughout Sauropoda. Material referred to this genus spans a temporal range from the Middle Jurassic until the early Late Cretaceous and has been described from five different countries, across three continents. These remains represent a wide array of sauropod groups, comprising non‐neosauropod eusauropods, a macronarian, titanosauriforms (including at least one definite brachiosaurid) and a rebbachisaurid. The type material of the Middle Jurassic ‘B. madagascariensis’ represents a derived non‐neosauropod eusauropod and possesses two potential autapomorphies. However, as a result of the fragmentary nature of the material and the uncertainty surrounding its association, a new taxon is not erected. Of the numerous specimens referred to ‘Bothriospondylus’, however, several remains are considered diagnostic: Ornithopsis hulkei (Early Cretaceous, UK), Lapparentosaurus madagascariensis (Middle Jurassic, Madagascar) and Nopcsaspondylus alarconensis (early Late Cretaceous, Argentina). At least three types of sauropod were present in the Bathonian (Middle Jurassic) of north‐west Madagascar, with a basal eusauropod (Archaeodontosaurus), a more derived eusauropod (‘B. madagascariensis’) and a titanosauriform (Lapparentosaurus) all approximately contemporaneous. Palaeocontinental reconstructions suggest that Middle Jurassic Madagascan sauropods would still have been capable of global biotic interchange, and this is perhaps reflected in their diverse assemblage. Re‐evaluation of these Malagasy forms has shed new light on this important time period in sauropod evolution.     

Assessment of Rhodamine B for labelling the plague reservoir Rattus rattus in Madagascar

The black rat is the main plague reservoir in rural foci in Madagascar, inside the villages as well as in the cultivated areas around. We have evaluated the potentialities of mass‐marking of rats, using baits containing Rhodamine B (RB) in order to get a tool to study the movements of rats and to understand the spread of plague. Laboratory experiments demonstrated that: (i) rats were more attracted by the rodent granules and peanut butter; (ii) incorporation of RB in baits did not reduce their appetence; (iii) RB lasted for 60 days in rat vibrissae and 180 days in rat hairs; and (iv) consumption of baits during a week was under the lethal dose. Field tests have been realized comparatively among 24 highland villages where plague is endemic, in different contexts: baits inside houses or around the village, baits with and without RB, rats captured 1, 2 and 3 months after the marking. No negative effect of the RB on population dynamics of rats or fleas on them was observed. The effectiveness of the marking was comparable between males and females. This technique of collective marking appears very valuable for monitoring rat movements in plague foci.     

The subfossil occurrence and paleoecological implications of Macrotarsomys petteri (Rodentia: Nesomyidae) in extreme southeastern Madagascar

Remains of a large-bodied species of endemic nesomyid rodent, Macrotarsomys petteri Goodman and Soarimalala, 2005, were identified from subfossil deposits recovered from Andrahomana Cave in extreme southeastern Madagascar. This recently described extant species was previously only known from a single specimen collected at a site about 450 km northwest of Andrahomana and with distinctly different forest habitat than currently found in the vicinity of the cave. Radiocarbon dating of remains of M. petteri from the cave site indicates that it persisted in the region subsequent to human settlement. Previous reports of a large member of Macrotarsomys from other Quaternary sites in southern Madagascar are almost certainly of M. petteri. It is proposed that this species once had a broad distribution across the southern portion of the island during a more mesic period and subsequent aridification of the region has led to its local extirpation across most of its former range. To cite this article: S.M. Goodman et al., C. R. Palevol 5 (2006).     

Phylogeny and genus-level classification of mantellid frogs (Amphibia, Anura)

We propose a novel classification of frogs in the family Mantellidae, based on published phylogenetic information and on a new analysis of molecular data. Our molecular tree for 53 mantellid species is based on 2419 base pairs of the mitochondrial 12S rRNA, 16S rRNA, tRNAVal and cytochrome b genes, and of the nuclear rhodopsin gene. Because the genus Mantidactylus Boulenger sensu lato is confirmed to be paraphyletic with respect to Mantella Boulenger, and is highly diverse in morphology and reproductive biology, we propose to partition Mantidactylus into seven genera by elevating four subgenera to genus rank (Blommersia Dubois, Guibemantis Dubois, Spinomantis Dubois, and Gephyromantis Methuen) and creating two new genera (Boehmantis gen. n. and Wakea gen. n.). In addition, we create the new subgenera Boophis (Sahona) subgen. n., Gephyromantis (Duboimantis) subgen. n., G. (Vatomantis) subgen. n., and Mantidactylus (Maitsomantis) subgen. n. The following species are transferred to Spinomantis, based on their phylogenetic relationships: S. elegans (Guibé) comb. n. (formerly in Mantidactylus subgenus Guibemantis); S. bertini (Guibé) comb. n. and S. guibei (Blommers-Schlösser) comb. n. (both formerly in Mantidactylus subgenus Blommersia); S. microtis (Guibé) comb. n. (formerly in Boophis Tschudi). Within Boophis, the new B. mandraka species group and B. albipunctatus species group are established. Boophis rhodoscelis (Boulenger) is transferred to the B. microtympanum group. The following five species are revalidated: Mantidactylus bellyi Mocquard and M. bourgati Guibé (not junior synonyms of M. curtus (Boulenger)); M. cowanii (Boulenger) (not syn. M. lugubris (Duméril)); M. delormei Angel (not syn. M. brevipalmatus Ahl); Mantella ebenaui (Boettger) (not syn. M. betsileo (Grandidier)). The new classification accounts for recent progress in the understanding of the phylogeny and natural history of these frogs, but it is still tentative for a number of species. Future modifications may be necessary, especially as concerns species now included in Gephyromantis and Spinomantis.Full article published online at: http://www.senckenberg.de/odes/06-11.htm     

Comparison of carabid beetle (Coleoptera: Carabidae) occurrence in rain forest and human-modified sites in south-eastern Madagascar

High species diversity and endemism make Madagascar one of the world's biodiversity hot spots. However, forest cover and, thereby, biodiversity are decreasing rapidly due to human activities. Most of Madagascar is now covered by secondary vegetation, which is species-poor and contains many introduced species. In this study, the effect of human impact through alteration in vegetation on carabid beetles (Coleoptera: Carabidae) was assessed. The study was conducted in montane rain forest in the Parc National de Ranomafana (south-eastern Madagascar), and in a nearby village area with various types of secondary vegetation. Beetles were collected by hand and by pitfall traps from ten sites from both areas. A total of 246 specimens belonging to 54 species were collected. Pitfall traps yielded only six specimens, which clearly shows that pitfall trapping is not a feasible method for catching carabids in such habitats. From the forest in the national park, 38 species were collected and from the village area 28 species. Species compositions and the dominant species were different: 12 species were found from both areas, while 16 species were unique to the village area and 26 species were unique to the forest. Half of the species were singletons and three most abundant species formed 31% of the total number of individuals. We conclude that because forest-dwellers do not occur in the human-modified environment, such species are at great risk of becoming extinct if current rates of forest decline continue in Madagascar.