Phenotypic divergence between seasnake (Emydocephalus annulatus) populations from adjacent bays of the New Caledonian Lagoon

Populations of widespread species often differ in phenotypic traits, although rarely in such a dramatic fashion as revealed by research on turtle‐headed seasnakes (Emydocephalus annulatus). These snakes are highly philopatric, with mark–recapture studies showing that the interchange of individuals rarely occurs even between two adjacent bays (separated by < 1.2 km) in Noumea, New Caledonia. Data on > 500 field‐captured snakes from these two bays reveal significant differences between these two locations in snake morphology (mean body length, relative tail length, head shape), colour, ecology (body condition, growth rate, incidence of algal fouling), behaviour (antipredator tactics), and locomotor performance. For some traits, the disparity was very marked (e.g. mean swimming speeds differed by > 30%). The causal bases for these phenotypic divergences may involve founder effects, local adaptation, and phenotypic plasticity. The spatial divergence in phenotypic traits offers a cautionary tale both for researchers (sampling of only a few populations may fail to provide a valid overview of the morphology, performance, and behaviour of a species) and managers (loss of local populations may eliminate distinctive genetic variation). © 2012 The Linnean Society of London, Biological Journal of the Linnean Society, 2012, ??, ??–??.     

Black reefs: iron-induced phase shifts on coral reefs

The Line Islands are calcium carbonate coral reef platforms located in iron-poor regions of the central Pacific. Natural terrestrial run-off of iron is non-existent and aerial deposition is extremely low. However, a number of ship groundings have occurred on these atolls. The reefs surrounding the shipwreck debris are characterized by high benthic cover of turf algae, macroalgae, cyanobacterial mats and corallimorphs, as well as particulate-laden, cloudy water. These sites also have very low coral and crustose coralline algal cover and are call black reefs because of the dark-colored benthic community and reduced clarity of the overlying water column. Here we use a combination of benthic surveys, chemistry, metagenomics and microcosms to investigate if and how shipwrecks initiate and maintain black reefs. Comparative surveys show that the live coral cover was reduced from 40 to 60% to <10% on black reefs on Millennium, Tabuaeran and Kingman. These three sites are relatively large (>0.75 km²). The phase shift occurs rapidly; the Kingman black reef formed within 3 years of the ship grounding. Iron concentrations in algae tissue from the Millennium black reef site were six times higher than in algae collected from reference sites. Metagenomic sequencing of the Millennium Atoll black reef-associated microbial community was enriched in iron-associated virulence genes and known pathogens. Microcosm experiments showed that corals were killed by black reef rubble through microbial activity. Together these results demonstrate that shipwrecks and their associated iron pose significant threats to coral reefs in iron-limited regions.     

In situ observation of settlement behaviour in larvae of coral reef fishes at night

The swimming behaviour of 534 coral reef fish larvae from 27 species was explored at Moorea Island (French Polynesia) while they searched for a suitable settlement habitat, on the first night of their lagoon life. Most larvae swam actively (74%) and avoided the bottom (77%). A significant relationship was highlighted between the vertical position of larvae in the water column and the distance they travelled from lagoon entrance to settlement habitat: larvae swimming close to the surface settled farther away on the reef than bottom-dwelling larvae.     

A new genus of monstrilloid copepods (Crustacea) with anteriorly pointing ovigerous spines and related adaptations for subthoracic brooding

Maemonstrilla gen. nov. , known exclusively from females, is proposed for Monstrilla longipes A. Scott, 1909, M. turgida A. Scott, 1909, and five new species from coral reef plankton in the Ryukyu Islands, Japan: Maemonstrilla hyottoko sp. nov. (type species), M. polka sp. nov. , M. spinicoxa sp. nov. , M. simplex sp. nov. and M. okame sp. nov. A syntype of M. turgida was examined, but the holotype of M. longipes is lost; the latter species, being similar to several of the new species, is regarded as unidentifiable, and the identity of specimens assigned to it by several authors is put in doubt. Until now, all known female monstrilloids have had posteriorly trailing ovigerous spines, but in Maemonstrilla gen. nov. these spines point anteriorly and hold the egg mass between the legs beneath the thorax. This is the first known instance of subthoracic brooding in a planktonic copepod; its functional significance is discussed, and brooding habits of non‐planktonic copepods are briefly reviewed. The intercoxal sclerites of legs 1–4 in Maemonstrilla gen. nov. are very wide, making room for the eggs. In all species except M. turgida comb. nov. , the inner seta of the proximal segment of each leg ramus is either absent or reduced to a nub; this may lessen interference of the egg mass with leg movement. All species have a uniramous leg 5 with two setae, except M. turgida comb. nov. (biramous with setae on both rami); M. turgida comb. nov. is evidently the sister‐group of its congeners, each sister‐group in the genus being defined by additional autapomorphies. Scanning electron micrographs of all the Ryukyuan species except M. simplex sp. nov. are provided; these constitute a preliminary survey of monstrilloid integumental organs and cuticular ornamentation. Among the unusual features are two lobes at the base of the coxa in legs 1–4 of M. polka sp. nov. and M. spinicoxa sp. nov. and two pairs of posterodorsal spine‐like scales on the first and second free pedigers of M. turgida comb. nov. Newly hatched nauplii of M. okame sp. nov. , examined by scanning electron microscopy, are generally similar to those of Monstrilla hamatapex Grygier & Ohtsuka, 1995, but with a different mandibular structure in which the distal hook and seta clearly represent the endopod, not enditic armament of the basis. © 2008 The Linnean Society of London, Zoological Journal of the Linnean Society, 2008, 152 , 459–506.     

Habitat loss, resource specialization, and extinction on coral reefs

Coral reefs worldwide are being degraded because of global warming (coral bleaching) and coastal development (sedimentation and eutrophication). Predicting the risk of species extinctions from this type of habitat degradation is one of the most challenging and urgent tasks facing ecologists. Habitat specialists are thought to be more prone to extinction than generalists; however, specialists may be more susceptible to extinction because (1) they are specialists per se, (2) they are less abundant than generalists, or (3) both. Here, I show that declines in coral abundance lead to corresponding declines in the abundance of coral‐dwelling fishes, but with proportionally greater losses to specialists than generalists. In addition, specialists have smaller initial population sizes than generalists. Consequently, specialists face a dual risk of extinction because their already small populations decline more rapidly than those of generalists. Corresponding with this increased extinction risk, I describe the local extinction of one specialist species and the near‐global extinction of another species. I conclude that habitat specialists will be the first species lost from coral reefs because their small populations suffer the most from human‐induced disturbances.     

Algal contact as a trigger for coral disease

Diseases are causing alarming declines in reef‐building coral species, the foundation blocks of coral reefs. The emergence of these diseases has occurred simultaneously with large increases in the abundance of benthic macroalgae. Here, we show that physical contact with the macroalga Halimeda opuntia can trigger a virulent disease known as white plague type II that has caused widespread mortality in most Caribbean coral species. Colonies of the dominant coral Montastraea faveolata exposed to algal transplants developed the disease whereas unexposed colonies did not. The bacterium Aurantimonas coralicida, causative agent of the disease, was present on H. opuntia sampled close to, and away from diseased corals, indicating that the alga serves as a reservoir for this pathogen. Our results suggest that the spread of macroalgae on coral reefs could account for the elevated incidence of coral diseases over past decades and that reduction of macroalgal abundance could help control coral epizootics.     

Spatial variation and effects of habitat on temperate reef fish assemblages in northeastern New Zealand

Reef-associated fishes can respond to changes in habitat structure and the nature of their response can change with different spatial scales of observation. A structured hierarchical mensurative sampling design was used to sample temperate reef fish assemblages in northeastern New Zealand at several spatial scales over 2 years. The three spatial scales examined were tens of meters (transects), hundreds to thousands of meters (sites) and hundreds of kilometers (locations). We tested the hypothesis that fish assemblages differed between kelp forest habitat (relatively dense stands of the kelp, Ecklonia radiata (C. Agardh) J. Agardh, median depth=13.5 m) and barrens habitat (rocky reef dominated by turfing and encrusting red algae and the grazing urchin, Evechinus chloroticus (Valenciennes), median depth=6.7 m). Recently developed multivariate techniques were used to test for and quantify multivariate variation at different spatial scales. There were significant effects of habitat on the spatial distribution of fish assemblages, characterised by greater abundances or frequencies of Parika scaber, Chromis dispilus, Trachurus novaezelandiae, Nemadactylus douglasii, Bodianus unimaculatus, Odax pullus and Pseudolabrus miles in kelp forest habitat, and greater abundances or frequencies of Notolabrus celidotus, Notolabrus fucicola, Girella tricuspidata, Coris sandageri, Chironemus marmoratus, Parma alboscapularis, Scorpis violaceus and Kyphosus sydneyanus in barrens habitat. Some of the more common species, including Upeneichthys lineatus, Scorpis lineolatus and Cheilodactylus spectabilis showed no strong consistent effects of these two differing habitats on their distributions. There was, however, a significant Habitat×Locations interaction: effects of habitat did not occur at all locations. Variability was highest at the scale of individual transects and variability from site to site and from location to location was comparable. Spatial variation was large compared to inter-annual variation, which was minimal, and spatial patterns were consistent in the 2 years examined. Further experiments, including manipulations, are required to understand what mechanisms and processes might be driving these patterns. This study, coupled with results from previous studies, suggests that there may be a dynamic inter-play between effects of habitat on fish and effects of fish on biogenic habitat, such as kelp forests.     

Vertical distribution behaviour and its spatial variation in late-stage larvae of coral-reef fishes during the day

Daytime vertical distribution behaviour of settlement-stage reef-fish larvae in the upper 18 m was documented by diver observations of 497 pelagic larvae of 7 species 100-1000 m offshore of Lizard Island, Great Barrier Reef. Four species were studied on 2 sides of the island. Depth amplitude and depth frequency differed among species, locations and times. Four pomacentrids had modal depths in the upper 30-50% of the water column. A lutjanid and 2 chaetodontids had modal depths 0-2 m deeper than the deepest-swimming pomacentrid. On the leeward side, 6 of 7 species swam deeper and/or more variably offshore. On the windward side, 1 of 4 species swam deeper or more variably offshore. No larvae swam deeper than 18 m on the leeward side, but 31% of larvae of 3 species did so on the windward side. Three of 4 species swam deeper and/or more variably on the windward than leeward side. Vertical distributions in relatively shallow water are apparently strongly influenced by water-column depth and bottom type.     

Identical digeneans in coral reef fishes from French Polynesia and the Great Barrier Reef (Australia) demonstrated by morphology and molecules

Three coral reef fish species, Zanclus cornutus, Chaetodon vagabundus and Naso lituratus, were collected in French Polynesia and on the Great Barrier Reef, Queensland. These fish species were each infected by one morphologically similar digenean species in both localities; Schistorchis zancli Hanson, 1953 was found in Zanclus cornutus, Preptetos laguncula Bray and Cribb, 1996 in Naso lituratus and Neohypocreadium dorsoporum Machida and Uchida, 1987 in Chaetodon vagabundus. In addition, on the Great Barrier Reef P. laguncula was also found in Naso unicornis and N. dorsoporum in Chaetodon ephippium and Chaetodon flavirostris. Morphometric differences between the species from the two sites were only slight. Sequences from the second internal transcribed spacer of the ribosomal DNA of each worm revealed total homology or negligible divergence between samples from hosts caught in French Polynesia and on the Great Barrier Reef. These results show that across more than 6000 km these digeneans are similar in morphology and genotype. Some species of fishes and molluscs are considered to have distributions that encompass the entire tropical Indo-West Pacific. These findings suggest that at least some of their parasites have similarly broad distributions.