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101.
Cucumber mosaic virus genome is encapsidated in alfalfa mosaic virus coat protein expressed in transgenic tobacco plants 总被引:1,自引:0,他引:1
The expression of viral coat protein (CP) in transgenic plants has been shown to be very effective in virus plant protection. However, the introduction of CP genes into plants presents the potential risk of the encapsidation of a superinfecting viral genome in the transgenic protein, an event which could change the epidemiology of the disease. To detect the potential heterologous encapsidation of the cucumber mosaic virus (CMV) genome by alfalfa mosaic virus (AIMV) CP expressed in transgenic tobacco plants, a system of immunocapture (IC) and amplification by polymerase chain reaction (PCR) was optimized. This provided high sensitivity and reliable selection of the heterologously encapsidated CMV genome in the presence of natural CMV particles. As little as 2 pg of virus could be detected by immunocapture/polymerase chain reaction (IC/PCR) technique. Evidence for heterologous encapsidation of the CMV genome was found in 11 of the 33 transgenic plants tested two weeks after CMV inoculation. This demonstrates a significant rate of heterologous encapsidation events between two unrelated viruses in transgenic plants. Since CP is involved in the interactions of the virus particle with its vector, the release in the field of such transgenic plants could alter the transmission properties of some important viruses. 相似文献
102.
An Aedes albopictus dihydrofolate reductase gene was used to construct two chimeric DNA vectors that functioned as dominant selectable markers in transfected, wild type mosquito cells. Stably transformed clones were recovered after 10–15 days in the presence of selective medium containing 1 μM methotrexate. The transformed clones contained an estimated 100–500 copies of transfected DNA per nucleus. Combined data from Southern blots and in situ hybridization to metaphase chromosomes indicated that transfected DNA was likely integrated into chromosomes both as repeated structures and as randomly integrated single copy molecules, with minimal rearrangement of coding sequences. Transfected DNA was stably maintained under selective conditions, but in some cases was lost when cells were maintained for prolonged periods in the absence of methotrexate. These observations provide a general framework for further development of stable gene transfer systems for mosquito cells in culture. 相似文献
103.
Wing Y. Cheung Jean-Charles Côté Diane L. Benoit Benoit S. Landry 《Plant Molecular Biology Reporter》1993,11(2):142-155
We have designed a simple and rapid assay for chloroplast-based triazine resistance in higher plants using PCR amplification
of thepsbA gene coupled toMaeI digestion of the amplified product to distinguish triazine resistant from sensitive biotypes. Our assay is universal and
avoids the need of lengthy procedures of previously published assays, which either required spraying of seedlings in a controlled
environment, quantification of chlorophyll fluorescence of leaf discs after incubation in triazine solution, DNA sequencing
of thepsbA gene, or Southern-blot analysis. Our diagnostic system is qualitative, reliable, fast and simple. More than 100 seedlings
taken directly from the field can be analyzed in one day. This system has a direct application towards a more rational use
of herbicides in production fields. It also represents a valuable tool to monitor spreading of resistant biotypes through
time and space and can serve as a model system applicable to other gene monitoring needs. 相似文献
104.
A rapid method for extraction of cotton (Gossypium spp.) genomic DNA suitable for RFLP or PCR analysis 总被引:13,自引:0,他引:13
Andrew H. Paterson Curt L. Brubaker Jonathan F. Wendel 《Plant Molecular Biology Reporter》1993,11(2):122-127
Extraction of high-quality genomic DNA fromGossypium (cotton) species is difficult due to high levels of polysaccharide, oxidizable quinones, and other interfering substances.
We describe a procedure that consistently permits isolation of cotton genomic DNA of satisfactory size and quality for RFLP
and PCR analysis, as well as for most routine cloning applications. Several antioxidants, phenol-binding reagents, and phenol
oxidase inhibitors are used throughout the procedure, and most polysaccharides are eliminated early in the procedure by isolation
of nuclei. 相似文献
105.
Ying-Ying Li Xi Chen Jin-Xian Yang Qiang Chen Tie-Ying Song Jun-Qing Ge 《Journal of fish biology》2023,102(1):141-154
Eels are important aquaculture species for which an increasing number of reference genes are being identified and applied. In this study, five housekeeping genes [RPL7 (ribosomal protein L7), 18 S (18 S ribosomal RNA), EF1A (elongation factor 1α), ACTB (β-actin) and GAPDH (glyceraldehyde-3-phosphate dehydrogenase)] were chosen to evaluate their reliability as reference genes for quantitative real-time PCR (qPCR) for the study of Anguilla anguilla. The expression of the selected genes in different eel tissues was determined using qPCR at different growth stages or upon challenge by Anguillid herpesvirus (AngHV), and the expression levels of these genes were then compared and evaluated using the geNorm and NormFinder algorithms. Then, RefFinder was used to comprehensively rank the examined housekeeping genes. Interestingly, the expression of the evaluated housekeeping genes exhibited tissue-dependent and treatment-dependent variations. In different growth periods A. anguilla tissues, the most stable genes were the following: ACTB in mucus; 18 S in skin and kidney; RPL7 in muscle, gill, intestine and brain; EF1A in heart and liver; and GAPDH in spleen. In contrast, in AngHV-challenged A. anguilla tissues, the most stable genes were the following: 18 S in mucus; RPL7 in skin, gill, heart, spleen, kidney and intestine; EF1A in muscle and liver; and ACTB in brain. Further comparison analysis indicated that the expression of RPL7 and EF1A was stable in multiple A. anguilla tissues in different growth periods and in eels challenged by AngHV. Nonetheless, the expression level of GAPDH in eel tissues was lower, and it was unstable in several tissues. These results indicated that the selection of reference genes for qPCR analysis in A. anguilla should be made in accordance with experimental parameters, and both RPL7 and EF1A could be used as reference genes for qPCR study of A. anguilla at different growth stages or upon challenge by AngHV. The reference genes identified in this study could improve the accuracy of qPCR data and facilitate further studies aimed at understanding the biology of eels. 相似文献
106.
PCR-mediated screening and labeling of DNA from clones 总被引:1,自引:0,他引:1
Yun Hai Lu Sylvie Nègre Philippe Leroy Michel Bernard 《Plant Molecular Biology Reporter》1993,11(4):345-349
A simplified and economical protocol for DNA library screening and nonradioactive labeling is described. Bacterial clones
are lysed in 1% of Triton X-100 and subjected to polymerase chain reaction in the presence of digoxigenin-11-dUTP to screen
and simultaneously to label the DNA inserts. Bacteriallysates are stable in storage at −20°C and can be used repeatedly for
PCR-mediated labeling. In this protocol, very low concentrations of dNTP, digoxigenin-dUTP, and primers are used in combination
with a reduced reaction volume. This will considerably reduce the expense of screening and labeling bacterial clones and facilitate
the exchange of DNA probes among laboratories. 相似文献
107.
The autoxidation of tetralin is treated as a model reaction system to define the applicability of stereospecific autocatalysis. This concept, predicting a spontaneous amplification of enantiomeric excess generated by an autocatalytic chemical reaction, is used in several theoretical models as an explanation for the origin of natural optical activity. The reaction system investigated obeys the basic criteria of these models: a chiral intermediate (tetralin hydroperoxide) is produced from an achiral substrate (tetralin) via an autocatalytic pathway where the feedback mechanism is expected to generate a state of broken chiral symmetry. In order to test the amplification capacity of this reaction a computer analysis of the kinetic scheme is performed. This simulation is derived from the known kinetic scheme of autoxidation and is validated by fitting the experimentally observed data of hydroperoxide evolution. Calculations show that this model allows powerful amplification of enantiomeric excess and a transient amplification of the optical rotation. It is also demonstrated that the model system exhibits pronounced sensitivity toward any loss of absolute configuration of the involved chiral species. Since an amplification effect results exclusively at a high degree of stereoselectivity, it is concluded that stereospecific autocatalysis is possible in systems which show template reactions, crystallization, or colloidal effects. © 1993 Wiley-Liss, Inc. 相似文献
108.
Toru Terachi 《Journal of plant research》1993,106(1):75-79
Recent advances in manipulating nucleic acids have opened a new research field called plant molecular systematics. This short
review provides an overview of molecular techniques which have been used in the analysis of DNA molecules for the study of
plant systematics, with a special emphasis on PCR. The early application of DNA analysis, DNA/DNA hybridization, has not become
popular with plant systematists, because of several disadvantages inherent in the method. The survey of restriction fragment
length polymorphisms (RFLPs), on the contrary, has become one of the preferred methods used by plant molecular systematists,
since the method is relatively easy to perform. Although unambiguous data can be obtained by both long-range restriction mapping
and nucleotide sequencing, these approaches may have limited use in plant molecular systematics because of their laborious
experimental procedures relying on conventional molecular cloning techniques. To date, PCR based analyses of the DNA molecule
seem to be the most suitable experimental approach for plant molecular systematics. Several advantages of the method have
changed both the quality and quantity of the DNA data. Further application of PCR to plant molecular systematics will open
up a new era in the field.
The present paper is based on the contribution which was read in a symposium entitled “Organellar DNA Variations in Higher
Plants and their Taxonomic Significance”, at the 50th Annual Meeting of the Botanical Society of Japan in Shizuoka on October
2, 1990, under the auspices of the Japan Society of Plant Taxonomists. 相似文献
109.
F J Livesey 《Briefings in Functional Genomics and Prot》2003,2(1):31-36
One of the critical limitations of current microarray technologies for use in expression analyses is the relatively large amount of input RNA required to generate labelled cDNA populations for array analysis. In situations where RNA is limiting, the options for expression profiling are to increase cDNA labelling and hybridisation efficiency, or to use an amplification strategy to generate enough RNA/cDNA for use with a standard labelling method. Sample amplification approaches must preserve the representation of the relative abundances of the different RNAs within the starting population and must also be highly reproducible. This review evaluates current signal and sample amplification technologies, including those that can be used to generate labelled cDNA populations for array analysis from as little as a single cell. 相似文献
110.
ROSEMARIE TEDESCHI CRISTINA VISENTIN ALBERTO ALMA DOMENICO BOSCO 《The Annals of applied biology》2003,142(3):285-290
Adults of Cacopsylla melanoneura, vector of the apple proliferation (AP) phytoplasma, were collected every 2 weeks from January until May in 2000 and 2001 by the beating tray method in eight apple orchards of the Aosta Valley (northwestern Italy). Total DNA was extracted from batches of five insects and amplified with the universal phytoplasma primers P1/P7 in direct PCR. A nested PCR assay was then performed on P1/P7 amplicons using the primers fO1/rO1, specific for the AP‐ phytoplasma group. The digestion of fO1/rO1 amplicons with Ssp I restriction endonuclease confirmed that C. melanoneura adults harboured the AP phytoplasma. The data obtained with PCR were used to estimate the proportion of AP‐positive insects in over wintered and offspring adults. Percentages of AP‐positive insects of 3.6% and 0.8% were estimated in 2000 among over wintered and offspring psyllids respectively. In 2001 only the over wintered insects were found infected, with an estimated proportion of 2.8%. The seasonal abundance of the vector was measured using yellow sticky traps. C. melanoneura was always present at a low population level, and the highest density was recorded from mid‐February until mid‐March in both years. The results show that the overwintered population is higher and spends a longer period in apple orchards, suggesting the crucial role of the overwintered adults in vectoring AP. 相似文献