Intraspecific Genetic Diversity of Undaria pinnatifida in Japan, based on the Mitochondrial cox3 Gene and the ITS1 of nrDNA

The intraspecific genetic diversity of the kelp Undaria pinnatifida (Harvey) Suringar (Laminariales, Phaeophyceae) was investigated using DNA sequences of the mitochondrial cytochrome oxidase subunit 3 (cox3) gene and internal transcribed spacer 1 (ITS1) of nuclear ribosomal DNA in plants collected from 21 localities along the Japanese coast between 2001 and 2003. Morphological variation was also examined and compared with the genetic diversity. Cox3 analyses of 106 plants revealed 9 haplotypes (I–IX) that differed from each other by 1–7 bp (all synonymous substitutions). Haplotype I was distributed in Hokkaido and the northern Pacific coast of Honshu, while haplotype III was found along the Sea of Japan coast of Honshu. Other types were found along the central and southern coast of Honshu. ITS1 analyses of 42 plants revealed 0–1.7% nucleotide differences, but plants from the Sea of Japan coast and northern Japan had similar sequences. The lower genetic differentiation along the Sea of Japan and northern coasts might be due to the recent establishment (after the middle of the last glacial period) of the Sea of Japan flora. The cox3 haplotype of cultivated plants was found in natural populations occurring close to cultivation sites (Naruto, Tokushima Pref., and Hokutan, Hyogo Pref.). This suggests that cultivated plants possibly escaped and spread or crossed with plants of natural populations. Morphological analyses of variation in 10 characters were conducted using 66 plants. The results showed no significant local variation owing to the wide variation in each population and did not support any forma previously described. No correlations between the morphological characters and cox3 haplotypes were detected.     

福建及中国其他沿岸海域中国鲎资源分布现状调查

采用调访渔民、浅海底拖网、野外观测潮间带亲鲎产卵和幼鲎孵育情况等调查方法,重点调查了福建沿岸海域中国鲎(Tachypleus tridentatus)资源分布和数量,并走访调查了浙江省、广东省、海南省、广西壮族自治区和台湾地区金门岛等地代表性的中国鲎栖息地,对中国沿岸海域中国鲎资源现状作了较全面的调查。结果表明,大部分海滩已多年未见中国鲎上岸产卵,中国鲎在上岸之前已被渔民通过底拖网捕获,能见到幼鲎的海滩寥寥无几,中国鲎已经从大部分海域消失,中国鲎资源量濒临枯竭。目前尚存少量中国鲎的海域主要是东山湾和北部湾海域。金门岛海域则因为人工放流和设立了中国鲎保护区,中国鲎资源得到较好的恢复。中国鲎资源衰竭的主要原因是人类的过度捕捞、栖息地的破坏和海域环境污染等。中国鲎资源的保护迫在眉睫。建议将中国鲎列入国家级重点保护动物名录,增设中国鲎自然保护区,加强渔业管理以及人工增殖放流等措施。     

Community Structure of Fishes and Habitat Complexity on a Tropical Rocky Shore

The relationship between the variables of reef fish community structure (fish richness, fish diversity and total number of fishes) and those of habitat complexity (total surface area, substratum diversity, topographic complexity, number of holes, percent cover of turf algae, zoanthids, millepores, massive corals, bare rock, encrusting calcareous algae, urchins, other sessile organisms and Sargassum) were examined on three different rocky shores (FA, FB and FT) at Arraial do Cabo, a tropical region located on Brazilian southeastern coast (23° S, 42° W). Fish abundance and vertical distribution were assessed by a visual census technique using strip transects. Percentage cover of benthic organisms and other substratum types were calculated by replicated transects using a chain laid down on the substratum. Topographic complexity was determined by the chain link method and number of holes were estimated by direct counts on replicated transects. More than 91 fishes belonging to 37 families were seen in all study sites during one year of visual census effort. FA and FB sites had similar fish community structure and habitat complexity characteristics, while FT showed different habitat characteristics and higher fish diversity and richness, plus total number of fishes. Vertical distribution of fishes along the rocky shores studied seemed to be predictable and was determined by factors such as feeding habits and behavior, availability of refuges and social interactions. The habitat variables that best explained the higher diversity and number of fishes observed in FT site were total surface area of rocky shores and the abundance of benthic sessile invertebrates; these conditions were typical of rocky shores more exposed to wave surge.     

Geochemical baseline determination and pollution assessment of heavy metals in urban soils of Karachi,Pakistan

Karachi is one of the most populated urban agglomerations in the world. No categorical study has yet discussed the geochemical baseline concentrations of metals in the urban soil of Karachi. The main objectives of this study were to establish geochemical baseline values and to assess the pollution status of different heavy metals. Geochemical baseline concentrations of heavy metals were estimated using the cumulative frequency distribution (CDF) curves. The estimated baseline concentrations of Pb, Cr, Cu, Zn and Fe were 56.23, 12.9, 36.31, 123.03 and 11,776 mg kg⁻¹, respectively. The pollution status of heavy metals in urban soils was evaluated using different quantitative indices (enrichment factor–EF, Geo-accumulation Index–I_geo, and pollution index–PI). Enrichments factors of the selected heavy metals determined by using Fe as a normalizer showed that metal contamination was the product of anthropogenic activities. The urban soils of Karachi were found to have a moderate to moderately severe enrichment with Pb, whereas Cr and Cu has moderate and Zn has minor enrichment. I_geo results indicated moderate soil contamination by Pb at some of the sampling locations. PI for Pb, Cr, Cu and Zn was found in the range of 0.04–3.42, 0.19–1.55, 0.27–2.45 and 0.32–1.57, respectively. Large variations in PI values of Pb revealed that soil in those areas of the city which are influenced by intensive anthropogenic activities have exceptionally high concentrations of Pb. The findings of this study would contribute to the environmental database of the soil of the region and would also facilitate both at the local and the international scales, in a more accurate global environmental monitoring, which will eventually facilitate the development of management and remediation strategies for heavy metal contaminated urban soil.     

Assessment of Fluoride in Three Selected Polluted Environments along the Egyptian Mediterranean Sea: Effects on Local Populations

Fluoride ion (F^?) is a relevant component of concern due to its potential toxicity for humankind. This study clarifies the status of F^? for human health in three polluted regions along the Egyptian Mediterranean Sea coast, and determining its contents in seawater and different fish tissues (muscle, skin, brain, and bone). Fluoride ion concentrations in different fish tissues had a descending trend of brain > skin > muscle > bone with averages of 26.8 ± 26.0, 24.8 ± 6.5, 12.7 ± 2.3, and 9.0 ± 1.6 μg F^?/g wet wt, respectively. The bioconcentration factor for fluoride ion in different fish tissues was determined and multivariate analyses were conducted. The human health hazard assessment from fish consumption and seawater contact using hazard quotient (HQ) and ingestion and dermal absorption dose of whole body for different ages of females and males as well as the specified body parts (legs, arms, and hands) were calculated. Although the calculated daily intake values for ingestion of fish in the present study were lower than some established tolerable daily intake values, their hazard quotients were within 1 ≥ HQ < 10 and may reflect a possible fluoride adverse effect on human health from the consumption of the gathered fish species.     

Origin and potential ecological risk assessment of trace elements in the watershed topsoil and coastal sediment of the Oualidia lagoon,Morocco

The Oualidia lagoon provides important ecosystem services, such as fishing, aquaculture, tourism and high biological and ecological productivity. Many indices have been developed to evaluate environmental risks and to estimate the anthropogenic contribution of potentially toxic elements (PTE) in surficial sediments. The results show that the concentrations of the PTE found in surface sediments due to the anthropogenic activities in the area (urban effluents, aquaculture and agricultural areas) are significantly higher than those from the local background and sediment quality guidelines (SQGs). The potential ecological and biological risk index present satisfactory results. However, the sites near to the areas where anthropogenic activities are developed present 49% probability of toxicity, while the rest of the lagoon, present 9% to 21% probability of toxicity and low potential ecological risk, except for Hg where the risk was considered to be considerable. The PTE are mainly originated from the anthropogenic activities; nevertheless, anthropogenic contributions represent up to 69% of the total sediment of content, but it depends on the PTE: Cd (16%), Ni (38%), Zn (41%), Cr (43%), Cu (56%), Hg (68%), Pb (69%). Compared with the Sub-basin soils, the PTE are higher than 80%, hence the sub-basin feeds the lagoon by these elements (PTE).     

Expression of Androgen Receptor and Cancer Stem Cell Markers (CD44+/CD24− and ALDH1+): Prognostic Implications in Invasive Breast Cancer

BACKGROUND: Androgen receptor (AR) has emerged as a significant prognostic marker in early breast cancer (BCa). Association of AR with cancer stem cell (CSC) markers in BCa is unknown. Aim of the present study was to evaluate the immunohistochemical expression of AR, CD44, CD24 and ALDH1 in a cohort of Pakistani patients diagnosed with invasive BCa and to correlate the expression with 5- year disease free survival. PATIENTS AND METHODS: We evaluated immunohistochemical expression AR, CD44, CD24 and ALDH1 in formalin fixed paraffin embedded archival blocks of 166 cases of primary invasive BCa (stage I-III) and correlated the expression with clinicopathological variables and outcome using univariable and multivariable analysis. Survival data was computed by Kaplan Meier curves. RESULTS: Expression of AR was observed in 62.7% tumors whereas CD44, CD24 and ALDH1 were expressed in 61.4%, 44% and 30.1% tumors, respectively. AR expression was significantly associated with T1-T2 tumors, lower grade, estrogen and progesterone receptor expression (P < .05) and remained an independent prognostic indicator in multivariable analysis (adjusted HR 0.33, 95% CI 0.13–0.81; P = .016). Significant association was observed between concordant expression of AR and CD24 (P = .001) with a favorable impact on survival (P = .007) whereas expression of CSC phenotypes (CD44⁺, CD44⁺/CD24^? and ALDH1⁺) did not correlate with adverse outcome (P > .05). However, AR expression retained the association with better prognosis even in patients whose tumors exhibited a CSC phenotype. CONCLUSIONS: Expression of AR and CD24 in stage I-III invasive BCa correlates with favorable clinicopathological features and delineates a subgroup of patients with better disease-free survival.     

ANNUAL PRODUCTIVITY AND EXTRACELLULAR RELEASE OF DISSOLVED ORGANIC COMPOUNDS BY THE EPIBENTHIC ALGAL COMMUNITY OF A BRACKISH MARSH1

Annual productivity and excretion of organic compounds by epibenthic algae in a coastal Texas marsh were investigated using ¹⁴C techniques. Over the course of two years, productivity and extracellular release were measured bimonthly to assess the environmental factors affecting seasonal patterns. Annual productivity was estimated to be 71 gc·m^?2, approximately 10% of the estimated net aerial productivity of the grass canopy in this area. The percentage of photoassimilated carbon released was fairly constant, and the rate of excretion appeared to be primarily dependent upon the rate of carbon fixation. Greater rates of release were observed with high salinity, low soil moisture conditions. It was estimated that up to 10% of the DOC in adjacent tidal creek water could be produced by this community and could represent an important source of nutrients for consumers in the system.     

DISTRIBUTION,SEASONALITY AND REPRODUCTIVE PHENOLOGY OF BANGIA ATROPURPUREA (RHODOPHYTA) IN RHODE ISLAND,U.S.A.1

Forty-seven sites along the Rhode Island coastline were sampled on a seasonal basis for the presence of the red alga Bangia atropurpurea (Roth) C. Ag. This species was found to be widely distributed, occurring at 94% of the hard, stable substrates sampled. Bangia populations were most, widespread in the winter (71% of sites) and least frequent in the summer (29% of sites). At one location, three high intertidal populations (average height 101 cm) and three low intertidal populations (average height 14 cm) were sampled monthly for two years. The upper intertidal populations appeared in September and persisted until at least May, whereas the lower populations were ephemeral, appearing for only a few months in late winter. The high intertidal populations were present on 85% of the sampling dates white the lower ones were observed on 25% of the sampling dates. Upper intertidal filaments reproduced exclusively by asexual monospores unlike those of the lower populations which were largely sexual. The maximum diameter of asexual and carpogonial filaments was 120 and 250 nm, respectively. Monosporagenesis was strongly correlated to temperature whereas gametogenesis was strongly correlated to photopriod.