Thermal limits in young northern fur seals,Callorhinus ursinus

The thermoregulatory abilities of northern fur seals (Callorhinus ursinus) during their first two years in the frigid waters of the North Pacific Ocean may limit their geographic distribution and alter the costs for exploiting different species of prey. We determined the thermoneutral zone of six young northern fur seals by measuring their metabolism in ambient air and controlled water temperatures (0°C–12°C) from ages 8 to 24 mo. We found that the ambient air temperatures within our study (overall 1.5°C–23.9°C) did not affect resting metabolic rates. Calculated lower critical temperatures in water varied between 3.9°C and 8.0°C, while an upper critical temperature in water was only discernible during a single set of trials. These thermal responses provide insight into the possible physiological constraints on foraging ecology in young northern fur seals, as well as the potential energetic consequences of ocean climate change and altered prey distributions.     

Tracing Ancestors and Relatives of Escherichia coli B, and the Derivation of B Strains REL606 and BL21(DE3)

Antecedents of Escherichia coli B have been traced through publications, inferences, and personal communication to a strain from the Institut Pasteur in Paris used by d'Herelle in his studies of bacteriophages as early as 1918 (a strain not in the current collection). This strain appears to have passed from d'Herelle to Bordet in 1920, and from Bordet to at least three other laboratories by 1925. The strain that Gratia received from Bordet was apparently passed to Bronfenbrenner by 1924 and from him to Luria around 1941. Delbrück and Luria published the first paper calling this strain B in 1942. Its choice as the common host for phages T1-T7 by the phage group that developed around Delbrück, Luria, and Hershey in the 1940s led to widespread use of B along with E. coli K-12, chosen about the same time for biochemical and genetic studies by Tatum and Lederberg. Not all currently available strains related to B are descended from the B of Delbrück and Luria; at least three strains with somewhat different characteristics were derived independently by Hershey directly from the Bronfenbrenner strain, and a strain that appears to have passed from Bordet to Wollman is in the current Collection of the Institut Pasteur. The succession of manipulations and strains that led from the B of Delbrück and Luria to REL606 and BL21(DE3) is given, established in part through evidence from their recently determined complete genome sequences.     

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ABSTRACT

Australian fur seals Arctocephalus pusillus doriferus are colonial breeding animals forming dense social groups during the breeding season. During this time, males establish and defend territories through physical conflicts, stereotyped posturing and vocalisations. While vocalisations are suggested to play an important role in male recognition systems, it has received little attention. Recordings of nine adult male Australian fur seals were made during the 2000 and 2001 breeding seasons at Kanowna Island (39° 10′S, 146° 18′ E), Bass Strait, Australia. The in-air bark vocalisations of territory-holding males were used to characterise the Bark Call and to determine whether males produce individually distinct calls, which could be used as a basis for vocal recognition. Seventeen frequency and temporal variables were measured from a total of 162 barks from nine individual males. The Bark Series was more reliably classified (83%) to the correct caller compared to the Bark Unit. This was assigned with less certainty (68%), although the classification was still relatively high. Findings from this study indicate that there is sufficient stereotypy within individual calls, and sufficient variation between them, to enable vocal recognition in male Australian fur seals.     

Phylogenetic diversity of indigenous cowpea bradyrhizobia from soils in Japan based on sequence analysis of the 16S-23S rRNA internal transcribed spacer (ITS) region

Cowpea [Vigna unguiculata (L.) Walp.] is an important legume crop and yet its rhizobia have not been well characterized in many areas. In the present study, sequence analysis of the bacterial 16S-23S rRNA internal transcribed spacer (ITS) region was performed to characterize genetically 76 indigenous cowpea rhizobia from five different geographic regions (Okinawa, Miyazaki, Kyoto, Fukushima and Hokkaido) of Japan. The sequence analysis clustered all isolates in the genus Bradyrhizobium. They were conspecific with B. japonicum, B. yuanmingense, B. elkanii and Bradyrhizobium sp., although none of them grouped with B. liaoningense, B. canariense, B. betae or B. iriomotense. B. yuanmingense was only isolated from the southern region (Okinawa) where it achieved the highest frequency of 69%. B. japonicum was predominant at Miyazaki, Fukushima and Hokkaido with more than 60% of the isolates. B. elkanii was mainly recorded in the southern (Okinawa: 31%, Miyazaki: 33%) and middle (Kyoto: 33%) regions. This species was present at a very low frequency in Fukushima and absent in Hokkaido in the northern area. Bradyrhizobium sp. like-strains were absent in the southern part (Okinawa, Miyazaki) but were concentrated either in the middle regions with 67% of Kyoto isolates and 28% of Fukushima isolates, and in the northern region with 40% of the Hokkaido isolates. This study revealed a geographical distribution of cowpea bradyrhizobia which seemed to be related to the differences in the environmental characteristics (soil type and soil pH, temperature, climate, moisture) of the different regions in Japan.     

Lifetime coastal and oceanic foraging patterns of male Guadalupe fur seals and California sea lions

Carcasses of adult and subadult male Guadalupe fur seals (GFSs) are beached on Isla Magdalena, representing about 73% of all GFSs beachings since 2003. Analysis of carbon and nitrogen stable isotopes in dentin collagen from male GFSs was used in an attempt to distinguish animals from two possible locations of origin: the oceanic Guadalupe Island (GI) and the coastal San Benito Islands (SBI). Samples of conterminous and contemporary California sea lions (CSLs) were included as representative of coastal predators. Two distinct groups of GFSs were evident based on δ¹³C values: coastal GFSs with higher δ¹³C values than CSLs, and oceanic GFSs with lower δ¹³C values than CSLs. Significant temporal trends were observed in the δ¹⁵N values; values for oceanic GFSs and CSLs increased annually (0.082‰ and 0.089‰, respectively), while those for coastal GFS decreased annually by 0.183‰. The isotopic segregation of oceanic and coastal GFS males, presumably from GI and SBI respectively, has been present at least since the mid-1990s. This segregation may be due to dissimilar ingestion of prey from oceanic vs. coastal origin prior to their seasonal co-occurrence in the Gulf of Ulloa.     

Ecological implications of unprecedented warm water anomalies on interannual prey preferences and foraging areas of Guadalupe fur seals

The Guadalupe fur seal (GFS) currently is recovering from near extinction and prey availability is an important factor. Scat and stable isotope analyses (SIA) were used to assess GFS foraging on Guadalupe Island during 2013–2016. This period was characterized by normal (2013) ocean temperatures followed by warm conditions (2014–2016). Scat samples (~40/year) were collected for prey identification. Additionally, lanugo samples from 1-month-old pups (50/year) were processed for SIA (δ¹³C/δ¹⁵N). Interannual prey preferences were identified (ANOSIM, p < .05), including significant differences between 2013 and the anomalous years. The most important prey species among these years was the jumbo squid; followed by the neon flying squid (2014–2016). The GFS diet was more specialized in 2013–2015 and more generalized in 2016. Prey from higher trophic levels (determined by scat analysis) were consumed during 2014–2016, but with significantly lower δ¹³C/δ¹⁵N values than in 2013 (ANOVA, p < .05 for both isotope ratios). This pattern may indicate more northerly or offshore foraging areas, with the presence of oceanic prey (neon flying squid). The widest isotopic niche was observed in 2015 (2.2‰²), reflecting a broader foraging area. Our findings are an important step toward better understanding the impacts of climate change on the recovery of GFS.     

Life history buffering in Antarctic mammals and birds against changing patterns of climate and environmental variation

The consequences of warming for Antarctic long‐lived organisms depend on their ability to survive changing patterns of climate and environmental variation. Among birds and mammals of different Antarctic regions, including emperor penguins, snow petrels, southern fulmars, Antarctic fur seals and Weddell seals, we found strong support for selection of life history traits that reduce interannual variation in fitness. These species maximize fitness by keeping a low interannual variance in the survival of adults and in their propensity to breed annually, which are the vital rates that influence most the variability in population growth rate (λ). All these species have been able to buffer these rates against the effects of recent climate‐driven habitat changes except for Antarctic fur seals, in the Southwest Atlantic. In this region of the Southern Ocean, the rapid increase in ecosystem fluctuation, associated with increasing climate variability observed since 1990, has limited and rendered less predictable the main fur seal food supply, Antarctic krill. This has increased the fitness costs of breeding for females, causing significant short‐term changes in population structure through mortality and low breeding output. Changes occur now with a frequency higher than the mean female fur seal generation time, and therefore are likely to limit their adaptive response. Fur seals are more likely to rely on phenotypic plasticity to cope with short‐term changes in order to maximize individual fitness. With more frequent extreme climatic events driving more frequent ecosystem fluctuation, the repercussions for life histories in many Antarctic birds and mammals are likely to increase, particularly at regional scales. In species with less flexible life histories that are more constrained by fluctuation in their critical habitats, like sea‐ice, this may cause demographic changes, population compensation and changes in distribution, as already observed in penguin species living in the Antarctic Peninsula and adjacent islands.     

The New Microbiology: A conference at the Institut de France

In May 2012, three European Academies held a conference on the present and future of microbiology. The conference, entitled “The New Microbiology”, was a joint effort of the French Académie des sciences, of the German National Academy of Sciences Leopoldina and of the British Royal Society. The organizers – Pascale Cossart and Philippe Sansonetti from the “Académie des sciences”, David Holden and Richard Moxon from the “Royal Society”, and Jörg Hacker and Jürgen Hesseman from the “Leopoldina Nationale Akademie der Wissenschaften” - wanted to highlight the current renaissance in the field of microbiology mostly due to the advent of technological developments and allowing for single-cell analysis, rapid and inexpensive genome-wide comparisons, sophisticated microscopy and quantitative large-scale studies of RNA regulation and proteomics. The conference took place in the historical Palais de l’Institut de France in Paris with the strong support of Jean-François Bach, Secrétaire Perpétuel of the Académie des sciences.     

Temporal Changes in Population Dynamics of American Martens

ABSTRACT Population parameters of American martens (Martes Americana) are often monitored to guide management actions. In order to better understand changing marten population demographics, we estimated marten abundance and several population parameters on a portion of northeast Chichagof Island (NCI), Southeast Alaska, USA, using capture-mark–recapture methods in combination with radiotelemetry and compared these data with demographic estimates derived from the trapper catch from the larger NCI area. We found that capture probability remained relatively high across trapping sessions by using a standard live-trapping protocol, and we found no evidence of capture probability being consistently affected by population or environmental factors. Estimated marten numbers varied greatly over the period, ranging from a low of 14.1 martens (0.17/km²) during winter 1997–1998 to a high of 45.6 martens (0.55/km²) during winter 1995–1996. The annual trend was for decreasing numbers from winter 1990–1991 to winter 1992–1993, then increasing numbers through winter 1995–1996. By winter 1996–1997, numbers had dropped substantially and remained low through 1997–1998. All population parameters varied temporally, including annual survival (0.34–1.00), sex ratio (1.0–3.5), mean age (0.5–2.9), body condition (-0.08–1.35), and fecundity (0.44–2.70). Yearly trapper catches on NCI varied greatly from 19 to 354 martens (0.02 martens/km² to 0.31 martens/km²) because of changing trapper effort and marten abundance. We found mean ages of carcasses a good predictor of population mean age, but sex ratios were highly variable. Marten numbers and fecundity were strongly correlated with rodent abundance, especially long-tailed voles (Microtus longicaudus). By monitoring demographic parameters of the population or trapper-caught carcasses, managers can gain insight into temporal population dynamics. Also, total captures of individuals may provide a useful estimate of marten numbers without the expense of radiocollaring and tracking individuals because population estimates were highly correlated with number of individuals captured during a standard survey. Because of their high vulnerability to trapping, close monitoring of marten populations is important for the conservation and sustained-yield management of the species. A tracking strategy developed with input data on preseason abundance and age structure may be the best management approach, especially for small populations with limited immigration.