Chemical and principal-component analyses of the essential oils of Apioideae taxa (Apiaceae) from central Balkan

The volatile constituents of the essential oils of 23 taxa belonging to the Apioideae subfamily were studied in detail. The investigated taxa were Pimpinella serbica (Vis.) Bentham & Hooker, Libanotis montana Cr., Cnidium silaifolium (Jacq.) Simk. ssp. orientale (Boiss.) Tutin, Bupleurum praealtum L., B. sibthorpianum S. S. var. diversifolium (Roch.) Hay, Aegopodium podagraria L., Torilis anthriscus (L.) Gmel., Orlaya grandiflora (L.) Hoffm., Laserpitium siler L., Laser trilobum (L.) Brokh., Chaerophyllum aureum L., C. hirsutum L., C. temulum L., Pastinaca sativa L., P. hirsuta Pancic., Tordylium maximum L., Physospermum cornubiense (L.) DC., Peucedanum alsaticum L., P. oreoselinum (L.) Moench, P. cervaria (L.) Cuss., P. austriacum (Jacq.) Koch, P. longifolium W. et K., and P. officinale L. All of these species grow wild in the central part of the Balkan Peninsula. The essential oils were found to be complex mixtures of various compounds, more than 100 constituents being in each taxon, with contributions of main products never exceeding 25% of the total content. Sesquiterpene hydrocarbons were found to be the main group of constituents of all taxa, except for Peucedanum species, where monoterpene hydrocarbons were identified as the main components. The chemotaxonomic value of the essential-oil composition is discussed according to results of principal-component analysis (PCA). The essential-oil composition mainly reflects current taxonomic relationships between the investigated taxa.     

A组人轮状病毒全基因组克隆和基因型分析

运用基因克隆和重组技术,从一急性胃肠炎患儿样品中克隆到一株轮状病毒（RV）全基因组cDNA。核苷酸序列测定结果表明,该株RV基因组11条RNA共含有18613个核苷酸（3302bp—751bp）,编码5791个氨基酸。全基因组研究结果表明,该株RV（TB-Chen）为A组,II亚组,基因型为G2P[4]/NSP4[A]。这是首个A组人RV全基因组研究结果的报道,对研究和开发RV疫苗具有积极的意义。     

Divalent metal ions promote the formation of the 5'-splice site recognition complex in a self-splicing group II intron

Group II introns are ribozymes occurring in genes of plants, fungi, lower eukaryotes, and bacteria. These large RNA molecular machines, ranging in length from 400 to 2500 nucleotides, are able to catalyze their own excision from pre-mRNA, as well as to reinsert themselves into RNA or sometimes even DNA. The intronic domain 1 contains two sequences (exon binding sites 1 and 2, EBS1 and EBS2) that pair with their complementary regions at the 3′-end of the 5′-exon (intron binding sites 1 and 2, IBS1 and IBS2) such defining the 5′-splice site. The correct recognition of the 5′-splice site stands at the beginning of the two steps of splicing and is thus crucial for catalysis. It is known that metal ions play an important role in folding and catalysis of ribozymes in general. Here, we characterize the specific metal ion requirements for the formation of the 5′-splice site recognition complex from the mitochondrial yeast group II intron Sc.ai5γ. Circular dichroism studies reveal that the formation of the EBS1 · IBS1 duplex does not necessarily require divalent metal ions, as large amounts of monovalent metal ions also promote the duplex, albeit at a 5000 times higher concentration. Nevertheless, micromolar amounts of divalent metal ions, e.g. Mg²⁺ or Cd²⁺, strongly promote the formation of the 5′-splice site. These observations illustrate that a high charge density independent of the nature of the ion is needed for binding EBS1 to IBS1, but divalent metal ions are presumably the better players.     

Group I introns and gnra tetraloops: remnants of ‘The RNA world’?

GNRA tetraloops, found in high frequency in natural RNAs, make loop-receptor interactions, stabilizing the tertiary structure of Group I introns, a class of small RNAs. Analyzing 230 Group I introns, to study the distribution and sequence pattern of the GNRA tetraloops, we suggest that these features reflect the ancestral nature of these catalytic molecules, in a prebiotic RNA world. The adenosine rich GNRA tetraloops would have interacted with each other through long range RNA-RNA interactions to form higher order structures forming potential sites that render the propensity for the short RNAs to bind to metal ions from the prebiotic pool, aiding them to act as metalloenzymes.     

扁颅蝠与褐扁颅蝠的集群结构

2001—2002年在广西宁明县和龙州县利用直接观察、捕捉测量(共捕到197群蝙蝠,全捕180群)和标记重捕法(标记了31群的101只扁颅蝠,重捕到36只)比较研究了扁颅蝠(tylonycteris pachypusa)与褐扁颅蝠(T．robustula)的集群结构。结果发现：扁颅蝠与褐扁颅蝠主要栖宿在刺竹(Bambusa stenostachya)的竹筒内,通过竹筒上的裂缝进出。扁颅蝠栖宿的竹筒长平均为27．7cm,外围直径平均为23．6cm;褐扁颅蝠的分别为28．3cm和23．8cm。扁颅蝠栖宿群大小为1—24只,褐扁颅蝠栖宿群大小为1—13只;2种蝙蝠的栖宿群中皆为独居所占比例最大(扁颅蝠为22．30％,褐扁颅蝠为40．63％),2只所占比例次之(分别为14．87％和18．75％),其它大小类型呈不规则变化。扁颅蝠栖宿群的性别组成,以雌雄混居最常见(占54．72％),其次为独居雄性(占20．95％),而褐扁颅蝠栖宿群雌雄混居群与独居雄性所占比例相当(均为40．63％)。2种蝙蝠的雄性趋向于独居,而雌性趋向于群居。扁颅蝠与褐扁颅蝠可以栖宿在同一片竹林内,并且可以在不同时间轮流使用同一个栖宿竹筒,但2种蝙蝠从未共栖于同一个竹筒内。另外,标记重捕扁颅蝠发现：扁颅蝠经常变换栖宿竹筒(栖宿竹筒不固定);同时栖宿群之间经常发生个体交换[动物学报50(3)：326—333．2004]。     

Regular Spliceosomal Introns Are Invasive in Chlamydomonas reinhardtii: 15 Introns in the Recently Relocated Mitochondrial cox2 and cox3 Genes

In the unicellular green alga, Chlamydomonas reinhardtii, cytochrome oxidase subunit 2 (cox2) and 3 (cox3) genes are missing from the mitochondrial genome. We isolated and sequenced a BAC clone that carries the whole cox3 gene and its corresponding cDNA. Almost the entire cox2 gene and its cDNA were also determined. Comparison of the genomic and the corresponding cDNA sequences revealed that the cox3 gene contains as many as nine spliceosomal introns and that cox2 bears six introns. Putative mitochondria targeting signals were predicted at each N terminal of the cox genes. These spliceosomal introns were typical GT–AG-type introns, which are very common not only in Chlamydomonas nuclear genes but also in diverse eukaryotic taxa. We found no particular distinguishing features in the cox introns. Comparative analysis of these genes with the various mitochondrial genes showed that 8 of the 15 introns were interrupting the conserved mature protein coding segments, while the other 7 introns were located in the N-terminal target peptide regions. Phylogenetic analysis of the evolutionary position of C. reinhardtii in Chlorophyta was carried out and the existence of the cox2 and cox3 genes in the mitochondrial genome was superimposed in the tree. This analysis clearly shows that these cox genes were relocated during the evolution of Chlorophyceae. It is apparent that long before the estimated period of relocation of these mitochondrial genes, the cytosol had lost the splicing ability for group II introns. Therefore, at least eight introns located in the mature protein coding region cannot be the direct descendant of group II introns. Here, we conclude that the presence of these introns is due to the invasion of spliceosomal introns, which occurred during the evolution of Chlorophyceae. This finding provides concrete evidence supporting the ``intron-late' model, which rests largely on the mobility of spliceosomal introns. Received: 22 August 2000 / Accepted: 28 February 2001     

介形纲丽足目和速足目及相关类群18S rDNA分子系统发育的研究

文中分析现生介形类 (Ostracoda) 4目 2 1科 2 9属的 18SrDNA部分序列 ,采用最大似然法 (ML)、邻接法 (NJ)和最大简约法 (MP) ,尝试构建介形类的分子系统树 ;结合介形类的形态特征和化石记录 ,主要对速足目(Podocopida)、丽足目 (Myodocopida)及其超科级分类阶元的系统发生关系进行探讨。 3种分析方法均支持形态学上Podocopida ,Myodocopida和海萤超科 (Cypridinacea)的界定 ;但对Podocopida目土菱介超科 (Bairdiacea)的系统地位提出质疑 ,该类群可能不是单系发生的自然类群。上述分析显示 ,Podocopida,Myodocopida,Platycopida和Halo cypridina组成一个单系群 ;介形类在目、超科、科和属的水平上可能发生过多次辐射分化     

青海格尔木市乌丽晚二叠世乌丽群下部的腕足化石群及Waagenites的地理分布

记述的腕足动物化石标本采自青海格尔木市乌丽附近的开心岭煤矿（妈乌丽煤矿）乌丽群的下部,经研究认为,该化石群的腕足动物属种组合及生物相特征,可与华南苏皖南部、川东华蓥山的龙潭组,黔西的宣威组下部,以及藏东昌都一带的妥坝组等腕足化石群对比,属于华南晚二叠世早期（吴家坪期）海陆交互相含煤岩系的产的常见类群。讨论和纠正了英方关于该化石群的部分属种鉴定名称、时代结论,以及中国学者过去引证乌丽群化石资料与地层名称方面的错误,并就二叠纪质作用和地质历史的强烈影响,探讨了Waagenites与Tethyo-chonetes的地质地理分布。     

Favositidae (Tabulata) from Emsian to Middle Devonian limestones of the Tamworth Group (N.S.W., Australia)

Several different species and species groups of the familiy Favositidae from the Emsian and Middle Devonian limestones of the Tamworth Group (N.S.W., Australia) are described. The Emsian Sulcor Limestone Member yieldedFavosites sp. aff.F. basalticus (Goldfuss, 1826),Favosites sp. aff.F. salebrosus Etheridge, 1899,Favosites stellaris Chernyshev, 1937,Squameofavosites nitidus (Chapman, 1914),Sq. bryani (Jones, 1937),Pachyfavosites rariporosus Dubatolov, 1963, andP. tumulosus Yanet, 1965. The Middle Devonian Moore Creek Limestone Member yieldedFavosites ex gr.goldfussi D’Orbigny, 1850, exclusively. In the Emsian limestones occur favositids in a wide array of different facies, with most being found in stratified biostromes and in bedded nodular limestones. In the Middle Devonian most favositids are found in nodular and lumpy limestones which occur at the base and at the top of some successions      

重组乙肝疫苗纯度高效液相层析(HPLC)测定方法的改进

为建立重组汉逊酵母乙肝疫苗HPLC检定方法,应用TSK－G5000PW检测系统测定汉逊酵母重组乙肝疫苗表面抗原的纯度,对不同样品处理液的配比浓度和处理时间分别进行了探讨,作者选用DTT／Tween-80作为样品处理效果优于DTT＋Tween-20,1:50Tween-80与0.1mol/L等量混合为样品处理液的适宜浓度。样品处理液与等量样品混匀时间介于35s-2min时,HPLC分离效果好,结果稳定。该处理液及处理时间对CHO细胞及Merck酿酒酵母重组乙肝疫苗表面抗原的HPLC纯度测定无影响。结果表明：现有的HPLC检测系统用0.1mol/L DTT与1：50 Tween-80等量混合处理后能有效地检测不同类型重组乙肝疫苗表面抗原的纯度。