Occurrence of diamine oxidase in the apoplast of pea epicotyls

Most of the diamine oxidase (EC 1.4.3.6) present in pea (Pisum sativum L. cv. Rondo) epicotyls is found in the fluid obtained by centrifuging pea epicotyl sections previously infiltrated under vacuum with a buffer solution. No detectable amount of the cytoplasmic enzyme glucose-6-phosphate dehydrogenase is present in this fluid, showing that there is very little contamination by cell contents. Polyacrylamide-gel electrophoresis and specific-activity data indicate that diamine oxidase is the most plentiful protein in the extracellular solution obtained from pea epicotyl sections and that an active process is involved in the selective transfer of the enzyme outside the cell. The possible involvement of diamine oxidase in the supply of H₂O₂ to peroxidase-catalyzed reactions occurring inside the cell wall is discussed.Abbreviations DAO diamine oxidase - Glc6P glucose-6-phosphate     

Complex organization of a cryptic satellite DNA in the genome of the marine invertebrate Rapana thomasiana Grosse (Gastropoda)

Isopicnic centrifugation in Cs₂SO₄-Ag⁺ gradients at pH 7.0 reveals that the genome of the marine snail Rapana thomasiana Grosse (Gastropoda) contains an AT-rich satellite fraction comprising 5% of the DNA. Restriction enzyme analysis shows that the satellite DNA is composed of a number of related subsets arranged in tandem arrays. They have evolved from the segmental amplification of an 1460 bp long monomer unit with a complex inner organization. Most probably, the present basic repeat originates from an ancestral 400–500 bp long sequence in which some insertions and/or deletions have occurred.     

Second virial coefficient of alpha-crystallin

Light scattering studies were performed on bovine alpha-crystallin measuring the scattering intensities as a function of scattering angle, concentration, and temperature. The data yielded the molecular weight, radius of gyration, and second virial coefficient of alpha-crystallin at different temperatures. The second virial coefficient increased with increasing temperature. Both the enthalpy and entropy of solution of alpha-crystallin are positive. The Flory theta temperature was found to be 271 K.     

Use of restrained molecular dynamics in water to determine three-dimensional protein structure: prediction of the three-dimensional structure of Ecballium elaterium trypsin inhibitor II

Refinement of distance geometry (DG) structures of EETI-II (Heitz et al.: Biochemistry 28:2392-2398, 1989), a member of the squash family trypsin inhibitor, have been carried out by restrained molecular dynamics (RMD) in water. The resulting models show better side chain apolar/polar surface ratio and estimated solvation free energy than structures refined "in vacuo." The consistent lower values of residual NMR constraint violations, apolar/polar surface ratio, and solvation free energy for one of these refined structures allowed prediction of the 3D folding and disulfide connectivity of EETI-II. Except for the few first residues for which no NMR constraints were available, this computer model fully agreed with X-ray structures of CMTI-I (Bode et al.: FEBS Lett. 242:285-292, 1989) and EETI-II complexed with trypsin that appeared after the RMD simulation was completed. Restrained molecular dynamics in water is thus proved to be highly valuable for refinement of DG structures. Also, the successful use of apolar/polar surface ratio and of solvation free energy reinforce the analysis of Novotny et al. (Proteins 4:19-30, 1988) and shows that these criteria are useful indicators of correct versus misfolded models.     

Influence of salt stress on primary metabolism of Zea mays L. seedlings of model genotypes

Short-term studies for comparing some primary metabolic and growth-responses to salt stress in seedlings of two maize genotypes differing in drought resistance were carried out under controlled conditions. Both genotypes revealed high yielding ability in favourable environments. Treatments: Control (Hoagland-Arnon No 1 solution) and salt stress (Hoagland-Arnon solution plus NaCl, _s = –0.84MPa). It was found that in both genotypes the activity of the principal metabolic pathway supplying reduced nitrogen (¹⁵N) for the synthesis of amino acids and proteins as well as the assimulatory number (¹⁴CO₂—assimilation relation rate per chlorophyll unit) were decreased under the effect of the stress. These effects were more marked in the resistant genotype. In this genotype the stress induced metabolic activity decline was accompanied by a corresonding reduction of the relative growth rate. Conversely, continuing growth, resulting probably from accumulation of solutes, was observed in the susceptible genotype.On the basis of these and other observations it is assumed that the resistant genotype manifests short-term energy saving stress reactions.     

Global bifurcations in the FitzHugh-Nagumo equations for nerve wave propagation

The FitzHugh-Nagumo equations for action potential propagation along nerve axons and the corresponding ordinary differential equations for travelling waves are solved numerically. Above a critical value, a constant bias current can drive a wave-front solution. At the critical value, a global bifurcation occurs. As a result, the wave front switches into a pulse.Based on a thesis by one of the authors (H. F.).     

Effect of harvest intensity and ground flora establishment on inorganic-N leaching from a Sitka spruce plantation in north Wales,UK

Inorganic-N concentrations in soil solution of whole tree harvest (WTH) and conventional fell (CF) plots were monitored for two years before felling and four years after felling. Concentrations in the mineral soil after felling were higher than in standing forest for up to 14 months in both felling treatments. In the WTH plots inorganic-N concentrations then dropped steadily until four years after felling they approached zero. In contrast, inorganic-N concentrations of the CF plots remained comparatively large. Inorganic-N was dominated by nitrate throughout the period of the study, and especially in the mineral horizons.Felling debris was not a source of inorganic-N, unless indirectly through release and mineralisation of soluble organic-N. Vegetation cover, biomass and N content were substantially greater in the WTH plots two to three years after felling, compared with the CF. Vegetation cover and brash cover (slash cover in N. America) were negatively correlated. There was also a negative correlation between inorganic-N concentration in soil water samplers and the vegetation cover within the collection area of, or a 1 m square surrounding, these samplers.Two factors are probably responsible for the reduction in inorganic-N concentrations after felling in the WTH — the rapid re-establishment of vegetation and the lack of a N source in felling debris. In the CF plots, brash prevents re-establishment of vegetation over wide areas for at least four years. However, brash is not directly a source of inorganic-N at this stage.     

On the mechanical characterization of compact bone structure using the homogenization theory

In a previous paper (Crolet et al., 1993, J. Biomechanics 26, 677–687), a modelling of the mechanical behavior of compact bone was presented, in which the homogenization theory was the basic tool of computation. In this simulation, approximations were used for the modelling of the lamellae and the osteons: the lamella and the osteon were divided into cylindrical sectors, each sector being approximated as a parallelepiped having a periodic structure (fibrous composite for the lamella, superimposition of plates for the osteon). The present study deals with a new model without these approximations. First, it can be proved that the homogenized elasticity tensor for a lamella, which has a non-periodic structure, is obtained at each geometrical point as a homogenized tensor of a periodic problem. Similarly, for the osteonal structure, the components of the homogenized tensor are determined at each point as the result of a periodic homogenization.

The software OSTEON, which is the computational method associated with this model, allows one to obtain a better understanding of the effects of many bony parameters. The obtained results are in accordance with experimental data.     

Shoot Sr concentrations in relation to shoot Ca concentrations and to soil properties

This work was aimed to investigate whether shoot Sr concentrations of plant species are related to respective Ca concentrations and to soil properties and to compare the Sr-Ca observed ratios (OR), defined as the quotient of the ratios Sr/Ca in shoots and in the soil solution or in the extractable form, among species and soils. Ten pasture plant species were grown in pots (1-L volume) filled with eight soils differing in the various physicochemical characteristics. Each pot received 50 mg Sr except those of the soil with the highest cation exchange capacity (C.E.C.) that received 100 mg Sr per pot. For each soil, shoot Sr concentrations of species were linearly and positively related with the respective Ca concentrations. C.E.C, organic matter content and Ca in the soil solution or in the extractable form were the only soil properties that were related, all negatively, with shoot Sr concentrations. The ratio of extractable Sr and Ca was positively and linearly related with the ratio of Sr and Ca. in the soil solution. OR was affected by both species and soils. Most of OR values of all species in all soils ranged between 0.8 and 1.5, except for the grass Agrostis capillaris which had the highest values for most of soils. This indicates that Agrostis capillaris compared to other species, takes up proportionally more Sr than Ca.     

Chaos in three species food chains

We study the dynamics of a three species food chain using bifurcation theory to demonstrate the existence of chaotic dynamics in the neighborhood of the equilibrium where the top species in the food chain is absent. The goal of our study is to demonstrate the presence of chaos in a class of ecological models, rather than just in a specific model. This work extends earlier numerical studies of a particular system by Hastings and Powell (1991) by showing that chaos occurs in a class of ecological models. The mathematical techniques we use are based on work by Guckenheimer and Holmes (1983) on co-dimension two bifurcations. However, restrictions on the equations we study imposed by ecological assumptions require a new and somewhat different analysis.