Notes on the use of wood refugia by Physella heterostropha (say) in a thermally disturbed swamp

Physella heterostropha size distributions and densities were measured in Pen Branch delta, a thermally altered swamp of the Savannah River, South Carolina. During cessation of thermal input, measurements were taken in a highly impacted area and more natural area. Of the three substrates sampled, logs, small woody material and benthos, snail density was highest on small pieces of submerged wood and < 20% of the snails on logs were out of the water. Following resumption of thermal input, snail density was four times higher on logs than previously measured. Snails responded to elevated water temperatures by congregating in a narrow band slightly above the water. Snail size did not appear to affect their response. However, the thermal history of the snails influenced their behaviour and survival rates. Logs may be a potential refuge for snails when water temperature are greater greater than 38°C. However, our results indicate that long-term survival in this manner may be impossible.     

Reconstruction of climate change during the Holocene in western and central Europe based on pollen records of indicator species

On the basis of distribution maps showing the first pollen occurrences in the Holocene of the well-known climate indicators Hedera, Ilex and Viscum as well as data for Corylus, a series of maps have been prepared that show summer and winter isotherms at various time intervals during the Holocene. From these maps climate curves for Amsterdam, the Netherlands have been set out. These were compared with curves for the Eemian at the same site. In both of these warm periods there is evidence for increased seasonality in the early phases which were relatively continental. Changes in insolation could account for such differences. Summer optima occurred earlier than winter optima. Changes in land-sea distribution are important, especially with regard to the patterns in winter climate. During the latter half of the Eemian, the climate was distinctly more oceanic than in the Holocene. Early in the Holocene, an influx of warm ocean water resulted in higher winter temperatures in the Gulf of Biscay, the Irish Sea, and areas east of Skagerrak-Kattegat. Temperature decline after the climatic optimum was greatest in the north, i.e. at 60°N, where a depression in the order of 2°C in summer and 2–3°C in winter occurred. Temperature decline was less farther south, i.e. at ca. 50°N, where a distinct west-east gradient in temperature change can be observed.     

Secondary structural changes of large and small fragments of bovine serum albumin in thermal denaturation and in sodium dodecyl sulfate denaturation

The helicities in various fragments of bovine serum albumin (BSA) were examined in the thermal denaturation and in sodium docecyl sulfate (SDS) denaturation. The thermal denaturation was examined in a temperature range between 2 and 65°C. The helicity decreased with a rise of temperature and it recovered to some degree upon cooling temperature. A rather high reversibility was observed in the BSA fragments, which were located in the N-terminal of the parent protein and then contained the first large loop with no disulfide bridge. The high reversibility was available also for the helicity in the first large loop of the fragment, disulfide bridges of which were reduced. The fragments, which were smaller than one domain, became unstable in the SDS denaturation. The helicities of such fragments decreased in lower SDS concentrations compared with those of the intact BSA and the large fragments, which contained one or more domains. A resistance to the SDS denaturation appeared in the helices of every large loop even after the fragmentation. On the other hand, helicities of the fragments decreased to 20–25% upon the reduction of disulfide bridges. However, the helicities of these fragments increased to 35–40% in the SDS denaturation.     

Upper thermal limits predict herpetofaunal responses to forest edge and cover

Amphibians and reptiles are sensitive to changes in the thermal environment, which varies considerably in human-modified landscapes. Although it is known that thermal traits of species influence their distribution in modified landscapes, how herpetofauna respond specifically to shifts in ambient temperature along forest edges remains unclear. This may be because most studies focus on local-scale metrics of edge exposure, which only account for a single edge or habitat patch. We predicted that accounting for the combined effect of multiple habitat edges in a landscape would best explain herpetofaunal response to thermally mediated edge effects. We (1) surveyed herpetofauna at two lowland, fragmented forest sites in central Colombia, (2) measured the critical thermal maximum (CT_max) of the species sampled, (3) measured their edge exposure at both local and landscape scales, and (4) created a thermal profile of the landscape itself. We found that species with low CT_max occurred both further from forest edges and in areas of denser vegetation, but were unaffected by the landscape-scale configuration of habitat edges. Variation in the thermal landscape was driven primarily by changes in vegetation density. Our results suggest that amphibians and reptiles with low CT_max are limited by both canopy gaps and proximity to edge, making them especially vulnerable to human modification of tropical forest. Abstract in Spanish is available with online material.     

Optimal strategy of plant antiherbivore defense: Implications for apparency and resource-availability theories

Plants produce chemicals as methods against animal herbivory. Such chemical defenses are classified into two major categories: (i) quantitative defenses with massive production of indigestible substances; and (ii) qualitative defenses with production of poisonous substances. A mathematical model was developed that identified factors that favored the evolution of quantitative defenses. Selecting an annual plant for simplicity, the allocation of photosynthetic production between growth substances and defense substances was considered. If the plant invests more in defense substances, it can protect itself more efficiently from herbivory but with a reduced growth rate. If it invests more in growth substances, the contrary holds. Using Pontoryagin's maximum principle, the following results were obtained: (i) the plant should conduct quantitative defenses when the growth rate (G), reflecting resource-availability, is low and the growth period (T) is long as well; (ii) if the plant invests in quantitative defenses, the optimal proportion of defense substances (χ^*) should be higher asG is smaller, but it is independent ofT; and (iii) the value of χ^* is not monotone for the effectiveness of defense substance (A), but has a maximum at an intermediate value ofA. Predictions of the model partly supported both Feeny's apparency theory, claiming that apparent plants or their parts for herbivores should quantitatively defend themselves, and Coley's resource-availability theory, claiming that plants with rich resources should invest in growth rather than defense.     

The dilemma of negative analysis of variance estimators of intraclass correlation

Summary At least two common practices exist when a negative variance component estimate is obtained, either setting it to zero or not reporting the estimate. The consequences of these practices are investigated in the context of the intraclass correlation estimation in terms of bias, variance and mean squared error (MSE). For the one-way analysis of variance random effects model and its extension to the common correlation model, we compare five estimators: analysis of variance (ANOVA), concentrated ANOVA, truncated ANOVA and two maximum likelihood-like (ML) estimators. For the balanced case, the exact bias and MSE are calculated via numerical integration of the exact sample distributions, while a Monte Carlo simulation study is conducted for the unbalanced case. The results indicate that the ANOVA estimator performs well except for designs with family size n = 2. The two ML estimators are generally poor, and the concentrated and truncated ANOVA estimators have some advantages over the ANOVA in terms of MSE. However, the large biases may make the concentrated and truncated ANOVA estimators objectionable when intraclass correlation () is small. Bias should be a concern when a pooled estimate is obtained from the literature since <0.05 in many genetic studies.     

Rate of acclimation of the tropical salt-marsh fish Cyprinodon dearborni to temperature changes

The acclimation rates of temperature changes in Cyprinodon dearborni, collected from Laguna Los Patos, Cumana, Venezuela, were determined by the critical thermal maximum method. At an increase in temperature (from 24 to 31°C) fish started to gain acclimation level after 3 hours and took 3 days to fully get up to a higher level of resistance to heat death; however, at a decrease in temperature (from 3 t to 24°C) fish began to lose its acclimation level after 12 days and required 39 days to reach a lower level of resistance to thermal death.     

The rotifer fauna of the River Loire (France), at the level of the nuclear power plants

In the heated affluents of nuclear power plants of the river Loire, rotifers are abundant. Cosmopolitan species are numerically dominant, but a tropical fauna is also present, among which the genus Brachionus, representing 20% of the total species, is best represented. From a comparison between water upstream and downstream of the power plants, it further appears that in downstream warmed-up waters, some species show an important development, but not in colder upstream waters.     

Révision systématiquedu genre Steginoporella smitt, 1873 (Bryozoa Cheilostomata)

Systematic revision of the genus Steginoporella: until now about eighty species were described. Only twenty recent species and thirty-four fossil ones are maintained. Several species and subspecies are new.The main interest of this revision is to establish a biostratigraphical scale: the settlement of this scale is based on the known stratigraphical distribution and on an attempt of phylogeny.The second advantage is ecological: all recent species live in marine tropical environment. The Steginoporella are good paleoecological indicators.At last, the establishment of a paleobiogeography, even incomplete and not definitive, allows to understand more easily recent distribution of Steginoporella connected with the great events of earth evolution.