Receptor binding and pH stability — How influenza A virus hemagglutinin affects host-specific virus infection

Influenza A virus strains adopt different host specificities mainly depending on their hemagglutinin (HA) protein. Via HA, the virus binds sialic acid receptors of the host cell and, upon endocytic uptake, HA triggers fusion between the viral envelope bilayer and the endosomal membrane by a low pH-induced conformational change leading to the release of the viral genome into the host cell cytoplasm. Both functions are crucial for viral infection enabling the genesis of new progeny virus.     

The identification of dysfunctional crosstalk of pathways in Parkinson disease

Parkinson disease (PD) is the second most common neurodegenerative disorder after Alzheimer's disease, affecting 1–2% of the population over the age of 65. Both genetic and environmental factors trigger risks of and protection from PD. However, the molecular mechanism of PD is far from being clear. In this study, we downloaded the gene expression profile of PD from Gene Expression Omnibus and identified differentially expressed genes (DEGs) and dysfunctional pathways in PD patients compared with controls. To further understand how these pathways act together to account for the initiation of PD, we constructed a pathway crosstalk network by calculating the Jaccard index among pathways. A total of 873 DEGs and 16 dysfunctional pathways between PD patients and controls were identified. Through constructing a network of pathways, the relationships among PD pathways were visually presented by their interactions. Our results demonstrate the existence of crosstalk between different pathways in PD pathogenesis. These results not only may explain the causes of PD, but could also open the door to new therapeutic approaches for this disease.     

深海沉积物微生物元基因组文库来源的新的酯酶基因的克隆、表达及酶学性质

【目的】从深海沉积物微生物元基因组文库中克隆新的酯酶基因,并进行酶学性质研究。【方法】利用含有三丁酸甘油酯的酯酶选择性筛选培养基,从深海沉积物微生物元基因组文库中筛选得到酯酶阳性Fosmid克隆。对筛选得到的fosmid FL10进行部分酶切构建亚克隆文库,筛选得到酯酶阳性亚克隆pFLS10。PCR扩增目的片段后与pET28a连接构建酯酶基因原核表达质粒,转化大肠杆菌(Escherichia coli)BL21。纯化表达产物并对其进行活性测定及酶学性质研究。【结果】序列分析显示该pFLS10亚克隆质粒含有一段924bp的ORF(Open Reading Frame),与一海洋元基因组文库中筛选出的酯酶ADA70030序列一致性为71%。该酶为一新的低温酯酶,对C4底物(对硝基苯丁酸酯)水解能力最强。该酶最适作用温度为20℃,最适作用pH为7.5,20℃时较为稳定,pH8-10的范围内有良好的pH稳定性,K+、Mg2+对该酶具有一定的激活作用,Mn2+等对其具有不同程度的抑制作用。【结论】应用元基因组技术筛选到了新的酯酶基因fls10并进行了克隆表达,该酶在低温及碱性条件下较为稳定且活力较高,对于工业化生产具有一定的应用潜力。关键词:深海沉积物;元基因组文库;低温酯酶;酶学特征     

Esterification of ferulic acid with polyols using a ferulic acid esterase from Aspergillus niger

Commercially available enzyme preparations were screened for enzymes that have a high ability to catalyze direct ester-synthesis of ferulic acid with glycerol. Only a preparation, Pectinase PL “Amano” produced by Aspergillus niger, feruloylated glycerol under the experimental conditions. The enzyme responsible for the esterification was purified and characterized. This enzyme, called FAE-PL, was found to be quite similar to an A. niger ferulic acid esterase (FAE-III) in terms of molecular mass, pH and temperature optima, substrate specificity on synthetic substrates, and the N-terminal amino acid sequence. FAE-PL highly catalyzed direct esterification of ferulic acid and sinapinic acid with glycerol. FAE-PL could feruloylate monomeric sugars including arabinose, fructose, galactose, glucose, and xylose. We determined the suitable conditions for direct esterification of ferulic acid with glycerol to be as follows: 1% ferulic acid in the presence of 85% glycerol and 5% dimethyl sulfoxide at pH 4.0 and 50 °C. Under these conditions, 81% of ferulic acid could be converted to 1-glyceryl ferulate, which was identified by ¹H-NMR. The ability of 1-glyceryl ferulate to scavenge 1,1-diphenyl-2-picrylhydrazyl (DPPH) radicals was higher than that of the anti-oxidant butyl hydroxytoluene.     

黑线姬鼠华北亚种与长江亚种几项生化指标的比较观察

黑线姬鼠(Apodemus agrarius Pallas)在我国分布广泛,是大部分地区的主要农田害鼠,它传播多种疾病,是流行性出血热病毒的主要携带者。国内外学者对我国黑线姬鼠的分类、分布、数量变动、生活习性等进行过一些研究,但对黑线姬鼠许多生化指标的研究尚未见报道。     

乙二胺四醋酸二钠对蝮蛇抗栓酶毒性的影响

对照组小鼠腹腔注射蝮蛇抗栓酶０．１ｕ／１０ｇ,实验组同时再注射０．５％ＥＤＴＡ２Ｎａ溶液０．２５ｍｌ／１０ｇ,结果表明,死亡率各组间无差别（Ｐ＞０．０５）,但对照组动物脏器有出血现象,而实验组则无出血。     

Hunting for moving hosts: Cephalonomia tarsalis, a parasitoid of free-living grain beetles

The parasitic wasp Cephalonomia tarsalis parasitizes larvae of the saw-toothed grain beetle Oryzaephilus surinamensis, which feed on wheat grains. In contrast to most other host–parasitoid systems studied so far, the grain beetles are highly mobile within their habitat, bulk of grains in grain stores. This should increase the wasps’ problem to locate the hosts. To study the host-finding strategy of C. tarsalis females, the reaction of wasps to different grain and host-derived odour sources was tested in a four-chamber-olfactometer. These experiments revealed that wasps were attracted by healthy grains and mechanically damaged grains. In direct comparison, healthy and mechanically damaged grains are equally attractive. Both potential sources of host-derived odours, host faeces and trail-traces of larvae on filter paper were attractive to the wasps. The response to trail-traces vanished 30 min after larvae had been removed from the filter paper. With respect to the specificity of the odours, it turned out that wasps were attracted to odours from the seed–host complexes from O. surinamensis and Oryzaephilus mercator and the non-host complex of larvae of the granary weevil Sitophilus granarius in wheat grains. Odours from the seed–host complex were preferred. From these results, we hypothesize that host habitat location in C. tarsalis is achieved by using grain-derived odours. Within the habitat, wasps search for kairomones from host faeces and host trails. Following these larval trails finally leads wasps to their hosts.     

Tolerance to herbivory in lupin genotypes with different alkaloid concentration: Interspecific differences between Lupinus albus L. and L. angustifolius L.

Lupin genotypes accumulate alkaloids that act as feeding deterrents for several kinds of herbivores. Breeding sweet (low alkaloid) genotypes resulted in a greater dependence on pesticides. Besides the concentration of defensive chemicals, plants possess another way to deal with herbivory, to allocate post-damage resources to growth in order to reach compensation in biomass (tolerance).

These two ways to deal with herbivores were postulated as alternative strategies, as scarce resources allocated to one function (growth or secondary metabolism) would not be available for the other function. Genotypes could differ in the way they respond to herbivory; identifying those genotypes with greater ability to overcome the damage would be useful to decrease the use of pesticides.

The aim of this work was to compare tolerance to herbivory in Lupinus albus and Lupinus angustifolius genotypes with contrasting alkaloid concentration. Tolerance was evaluated by comparing growth and grain yield of field-grown cut and uncut plants. Cutting treatments were performed at flowering by cutting 50% of the upper shoot biomass (including the main apex, stems, flowers and leaves). Differences between species were found in their tolerance to herbivory. While L. angustifolius showed full compensation in growth or grain yield that allowed cut plants to equal controls biomass or yield after damage, simulated herbivory reduced growth and grain yield in L. albus.     

Transacetylation of carbohydrates in organic solvent catalysed by O-acetylpeptidoglycan esterase from Neisseria gonorrhoeae

The potential of the Neisseria gonorrhoeae O-acetylpeptidoglycan esterase (Ape1a) for catalysing transacetylations in organic solvents with a number of carbohydrate acceptors was investigated. The performance of the enzyme was observed to improve as the polarity index of the solvent increased. The best transacetylation conditions were determined to be a 1:6 phosphate buffer/ethyl acetate system, where Ape1a catalysed approximately 28% acetylation of 4-methylumbelliferyl-N-acetylglucosamine using p-nitrophenyl acetate as donor. Further analysis of the acetylated products by reverse phase HPLC and ESI-mass spectrometry confirmed the presence of monoacetylated 4-methylumbelliferyl-N-acetylglucosamine. Under identical reaction conditions, the enzyme also performed transacetylations using ethyl acetate or vinyl acetate as donor. These results demonstrated the feasibility of using the bacterial cell wall enzyme Ape1a to generate hitherto unattainable compounds which may be used as antagonists of peptidoglycan-metabolizing enzymes.     

微生物酯酶研究进展

酯酶自发现以来,逐渐被开发利用于医药、化工、食品等领域,其中动植物来源酯酶工业化应用较少,微生物作为天然的酶资源库,是新型酯酶的主要来源之一。然而,大量新型微生物酯酶由于活性低、稳定性差等原因难以达到工业应用的要求;同时酯酶的筛选、活性评价方法仍存在通用性低、成本高的问题,一定程度上阻碍了新型微生物酯酶挖掘和改造。据此,本文总结了近年来微生物酯酶分类与发现、结构与催化特性、改造和优化以及应用等领域的研究新进展,以期促进酯酶的挖掘和工业化应用。