Maximum-likelihood models for mapping genetic markers showing segregation distortion. 2. F2 populations

In F₂ populations, gametic and zygotic selection may affect the analysis of linkage in different ways. Therefore, specific likelihood equations have to be developed for each case, including dominant and codominant markers. The asymptotic bias of the classical estimates are derived for each case, in order to compare them with the standard errors of the suggested estimates. We discuss the utility and the efficiency of a previous model developed for dominant markers. We show that dominant markers provide very poor information in the case of segregation distortion and, therefore, should be used with circumspection. On the other hand, the estimation of recombination fractions between codominant markers is less affected by selection than is that for dominant markers. We also discuss the analysis of linkage between dominant and codominant markers.     

The distribution of Gossypium hirsutum chromatin in G. barbadense germ plasm: molecular analysis of introgressive plant breeding

Cotton is unusual among major crop plants in that two cross-fertile species are widely cultivated for a common economic product, fiber. Both historical evidence and classical genetic studies suggest that many improved forms of Gossypium barbadense (Sea Island, Egyptian, and Pima cottons) may include chromatin derived from G. hirsutum. Using 106 restriction fragment length polymorphism (RFLP) loci well distributed across the cotton genome, we revealed the amount and genomic distribution of G. hirsutum chromatin in 54 G. barbadense collections from around the world. The average G. barbadense collection was comprised of 8.9% alleles apparently derived from G. hirsutum. Pima cultivars (7.3 %) had fewer G. hirsutum alleles than Sea Island (9.0%) or Egyptian (9.6%) cultivars. G. hirsutum alleles were not randomly distributed, as 57.5% of the total introgression observed was accounted for by five specific chromosomal regions that span less than 10% of the genome. The average length of an introgressed chromosome segment was 12.9 cM. Overlap of introgressed chromatin in different breeding programs hints that retention of these G. hirsutum chromosomal segments may impart a selective advantage to G. barbadense genotypes. Although cluster analysis generally grouped germ plasm from common classes and/or breeding programs together, no 2 genotypes were identical — thus differences in the length and repertoire of introgressed chromosome segments also permit DNA fingerprinting of G. barbadense cultivars.     

Analysis of the genetic effects for several traits in oil palm (Elaeis guineensis Jacq.) populations. I. Population means

An oil palm experiment was set up in the Ivory Coast to compare the effects of crossing and selfing within two origins, Deli and La Mé, on the mean and the variability of Deli x Mé between-origin hybrids. The originality of the experiment lay in the crossing plan, which provided access to genetic parameters related to additivity, dominance and different components of epistasis. This first part covers the analysis of the components of the mean. The parents used were obtained from four palms, two from each origin. Those of La Mé origin were half-sibs. The common parent came from a wild stand in the Ivory Coast. Those of Deli origin were from two different populations bred in Southeast Asia for several generations from a narrow genetic base. These four parents gave rise to nine Deli x La Mé hybrid populations with double-cousintype links. The additive component is more important within the Deli origin than within the La Mé origin. This may be explained by the large genetic divergence between the two Deli parent palms. On the other hand, the additive^* additive epistasis is more substantial within the La Mé origin, probably because of inbreeding. The discussion concentrates on how this information should be used when choosing parents to be crossed and tested and to produce improved populations. The crossing plan proposed can be of general use and is suitable for other species in a reciprocal recurrent selection programme.     

Factors affecting Agrobacterium tumefaciens-mediated transformation in several black poplar clones

Transient expression of the uidA reporter gene was used in preliminary experiments with two oncogenic and two disarmed Agrobacterium tumefaciens strains in order to test the efficiency of T-DNA transfer to N084 x Populus nigra and N107 x P. nigra clones. The oncogenic strain A281 pKIWI105 produced the highest average number of GUS spots per leaf disc. In order to optimize the production of transgenic plantlets from different P. nigra clones (San Giorgio, Jean Pourtet, N084 x P. nigra and N107 x P. nigra, respectively), two A. tumefaciens strains (GV2260 p35S GUS, A281pKIWI105) and bacterial concentrations (7×10⁸; 1.2×0⁹ bacteria ml^-1) were used. Following co-cultivation with A281 pKIWI105, the frequency of leaf discs producing kanamycin-resistant calli was not significantly different between the clones and bacteria concentrations used. Transformed shoots were regenerated from all clones, except for Jean Pourtet. Co-cultivation of leaf discs with GV2260 p35S GUS produced very few calli which died when transferred to selective regeneration medium. In addition, the effects of acetosyringone and leaf wounding were evaluated for the San Giorgio and Jean Pourtet clones, using the same strains. Factors which significantly affected the transformation efficiency of leaf explants were the P. nigra clone, the A. tumefaciens strain, and the presence of acetosyringone. Genetic transformation of calli and regenerated plantlets was confirmed by their ability to grow and root on Woody Plant Medium containing kanamycin, by histochemical -glucuronidase assays, and Southern blot hybridization analyses.Abbreviations BA benzyladenine - GUS -glucuronidase - IBA indolebutyric acid - MS Murashige and Skoog - NAA -naphthaleneacetic acid - nptII neomycin phosphotransferase II gene - uidA -glucuronidase gene - WPM Woody Plant Medium     

云南普通马矮型马蛋白多态性及其品种分化关系

本文运用蛋白电泳技术对来自云南省文山州马关县和麻栗坡县的２１匹普通马和１４匹矮型马进行了分析。共分析遗传座位４４个,其中有１０个座位检测到多态性。根据分子钟假说和相应的公式,推算两者的分歧时间约为１８．５万年。     

Structure,function and evolution of seryl-tRNA synthetases: Implications for the evolution of aminoacyl-tRNA synthetases and the genetic code

Two aspects of the evolution of aminoacyl-tRNA synthetases are discussed. Firstly, using recent crystal structure information on seryl-tRNA synthetase and its substrate complexes, the coevolution of the mode of recognition between seryl-tRNA synthetase and tRNA^ser in different organisms is reviewed. Secondly, using sequence alignments and phylogenetic trees, the early evolution of class 2 Amnoacyl-tRNA synthetases is traced. Arguments are presented to suggest that synthetases are not the oldest of protein enzymes, but survived as RNA enzymes during the early period of the evolution of protein catalysts. In this view, the relatedness of the current synthetases, as evidenced by the division into two classes with their associated subclasses, reflects the replacement of RNA synthetases by protein synthetases. This process would have been triggered by the acquisition of tRNA 3 end charging activity by early proteins capable of activating small molecules (e.g., amino acids) with ATP. If these arguments are correct, the genetic code was essentially frozen before the protein synthetases that we know today came into existence. Correspondence to: S. CusackBased on a presentation made at a workshop-Aminoacyl-tRNA Synthetases and the Evolution of the Genetic Code-held at Berkeley, CA, July 17–20, 1994     

小麦提型不育系和杂交种种子生活力遗传改良初探

本试验共选用了4个提型不育系(A系)及其保持系(B系)、4个恢复系(R系)及其川7B/R4份F~1|代材料,用不同遗传背景的B、R系及川7B/R材料与A系杂交,种子成熟时收获干燥考种,度过休眠期后进行发芽试验。结果表明,父本对F~0|种子千粒重存在胚乳直感现象;川3A、川4A与其它B系杂交,其F~0|种子的千粒重、饱满度、发芽率和发芽势均有不同程度的提高;川4A×R和川6A×R的杂种种子千粒重多分别比川4A×川7B/R和川6A×川7B/R的高,但前种组合(A×R)的种子发芽和发芽率远不如后一种组合(A×川7B /R)的种子,且前种组合的穗发芽率也较高。作者认为,利用A系与农艺性状相近、但遗传背景各异的B系杂交,或在R系中输入抗提型细胞质负影响的高种子生活力基因, 是提高A系和杂交种种子生活力的值得注意的途径。 Abstract:The objective of this paper is trying to grope for ways of improving sced viability of A-line and hybrid in wheat with T.timopheevi cytoplasm.Four A lines and their B lines,4 restorers (R line) and 4 crosses of Chuan 7B/R were used.The combinations of A×B,A×R and A×Chuan 7B/R were madc,and 1 000-grain weight (GW),rate of pre-harvest sprouting(RPHS),germinating energy(GE) and germination percentage (GP) of their F0 seeds were investigated.The results showed that the GW,full weight,GE and GP of the seeds of Chuan 3A and 4A×other B lines were higher than those of Chuan 3A×3B and chuan 4A×4B;although the GW of Chuan 4A and 6A×R were heavier than those of Chuan 4A and 6A×Chuan 7B/R,the GE and GP of the latter crosses increased largely and their RPHScs were less.Therefore,it was considered as effective ways for improvement on seed viability,that A lines cross with other B lines having different genetic background but similar agronomic characters and that the gene(s) concerning high seed viability were transferred into restorers.     

不同环境下家蚕产量构成因素的通径分析及育种对策的探讨

利用52个家蚕品种在春秋两个季节的试验资料,对万头茧层量及其构成因素作了通径分析。结果表明:不同环境下,诸因素对万头茧层量的作用不完全相同,主要表现为幼虫生命率和茧层率在不同季节中的作用相对地变化。结合育种实践指出:(1)春用蚕品种的选育应在保证生命率的前提下努力提高茧层率和全茧量,而夏秋用品种的选育应在保证茧层率的前提下努力提高生命率和全茧量。 (2)为提高选择效果,春蚕期育种应以选择茧层率为主,夏秋期育种应以选择生命率为主。     

Stamens are not essential as an attractant for pollinators in females of cryptically dioecious Thalictrum pubescens Pursch. (Ranunculaceae)

 It has been hypothesized that females of some dioecious species maintain stamens that produce sterile pollen as a means of attracting pollinators to promote greater seed set. However, this hypothesis has rarely been tested. This paper examines the role of pollinators in the maintenance of sterile stamens in the cryptically dioecious species, Thalictrum pubescens. Wind was found to contribute to pollination; branches of female T. pubescens enclosed in cheesecloth to exclude insects but not wind were still able to set seed. Therefore, females may not need the stamens for pollination. In 1994, insects were found to discriminate against emasculated female flowers, but this discrimination did not lead to a significant difference in either the amount of pollen received or seed set. In 1995, emasculation was combined with the addition of pollen to determine if emasculated females were pollen limited. No significant effect of pollen addition or emasculation was found. Emasculated branches in the pollen-addition treatment appeared to have slightly lower seed set than non-emasculated branches that received pollen, indicating that the slight reduction in seed set was caused by emasculation rather than pollen limitation. Since stamens do not appear to be maintained as pollinator attractants, other explanations, such as genetic constraints, must be investigated. Received: 4 February 1997 / Revision accepted: 20 May 1997     

An Analysis of the Metabolic Theory of the Origin of the Genetic Code

A computer program was used to test Wong's coevolution theory of the genetic code. The codon correlations between the codons of biosynthetically related amino acids in the universal genetic code and in randomly generated genetic codes were compared. It was determined that many codon correlations are also present within random genetic codes and that among the random codes there are always several which have many more correlations than that found in the universal code. Although the number of correlations depends on the choice of biosynthetically related amino acids, the probability of choosing a random genetic code with the same or greater number of codon correlations as the universal genetic code was found to vary from 0.1% to 34% (with respect to a fairly complete listing of related amino acids). Thus, Wong's theory that the genetic code arose by coevolution with the biosynthetic pathways of amino acids, based on codon correlations between biosynthetically related amino acids, is statistical in nature. Received: 8 August 1996 / Accepted: 26 December 1996