A new tool for monoclonal antibody analysis: Application of IdeS proteolysis in IgG domain-specific characterization

Monoclonal antibody (mAb) products are extraordinarily heterogeneous due to the presence of a variety of enzymatic and chemical modifications, such as deamidation, isomerization, oxidation, glycosylation, glycation, and terminal cyclization. The modifications in different domains of the antibody molecule can result in different biological consequences. Therefore, characterization and routine monitoring of domain-specific modifications are essential to ensure the quality of the therapeutic antibody products. For this purpose, a rapid and informative methodology was developed to examine the heterogeneity of individual domains in mAb products. A recently discovered endopeptidase, IdeS, cleaves heavy chains below the hinge region, producing F(ab')₂ and Fc fragments. Following reduction of disulfide bonds, three antibody domains (LC, Fd, and Fc/2) can be released for further characterization. Subsequent analyses by liquid chromatography/mass spectrometry, capillary isoelectric focusing, and glycan mapping enable domain-specific profiling of oxidation, charge heterogeneity, and glycoform distribution. When coupled with reversed phase chromatography, the unique chromatographic profile of each molecule offers a simple strategy for an identity test, which is an important formal test for biopharmaceutical quality control purposes. This methodology is demonstrated for a number of IgGs of different subclasses (IgG1, IgG2, IgG4), as well as an Fc fusion protein. The presented technique provides a convenient platform approach for scientific and formal therapeutic mAb product characterization. It can also be applied in regulated drug substance batch release and stability testing of antibody and Fc fusion protein products, in particular for identity and routine monitoring of domain-specific modifications.     

Evaluation of a novel methacrylate‐based protein a resin for the purification of immunoglobulins and Fc‐fusion proteins

Protein A affinity chromatography is a central part of most commercial monoclonal antibody and Fc‐fusion protein purification processes. In the last couple years an increasing number of new Protein A technologies have emerged. One of these new Protein A technologies consists of a novel, alkaline‐tolerant, Protein A ligand coupled to a macroporous polymethacrylate base matrix that has been optimized for immunoglobulin (Ig) G capture. The resin is interesting from a technology perspective because the particle size and pore distribution of the base beads are reported to have been optimized for high IgG binding and fast mass transfer, while the Protein A ligand has been engineered for enhanced alkaline tolerance. This resin was subjected to a number of technical studies including evaluating dynamic and static binding capacities, alkaline stability, Protein A leachate propensity, impurity clearance, and pressure–flow behavior. The results demonstrated similar static binding capacities as those achieved with industry standard agarose Protein A resins, but marginally lower dynamic binding capacities. Removal of impurities from the process stream, particularly host cell proteins, was molecule dependent, but in most instances matched the performance of the agarose resins. This resin was stable in 0.1 M NaOH for at least 100 h with little loss in binding capacity, with Protein A ligand leakage levels comparable to values for the agarose resins. Pressure–flow experiments in lab‐scale chromatography columns demonstrated minimal resin compression at typical manufacturing flow rates. Prediction of resin compression in manufacturing scale columns did not suggest any pressure limitations upon scale up. © 2014 American Institute of Chemical Engineers Biotechnol. Prog., 30:1125–1136, 2014     

Impact of single-chain Fv antibody fragment affinity on nanoparticle targeting of epidermal growth factor receptor-expressing tumor cells

To determine the importance of single-chain Fv (scFv) affinity on binding, uptake, and cytotoxicity of tumor-targeting nanoparticles, the affinity of the epidermal growth factor receptor (EGFR) scFv antibody C10 was increased using molecular evolution and yeast display. A library containing scFv mutants was created by error-prone PCR, displayed on the surface of yeast, and higher affinity clones selected by fluorescence activated cell sorting. Ten mutant scFv were identified that had a 3-18-fold improvement in affinity (KD=15-88 nM) for EGFR-expressing A431 tumor cells compared to C10 scFv (KD=264 nM). By combining mutations, higher affinity scFv were generated with KD ranging from 0.9 nM to 10 nM. The highest affinity scFv had a 280-fold higher affinity compared to that of the parental C10 scFv. Immunoliposome nanoparticles (ILs) were prepared using EGFR scFv with a 280-fold range of affinities, and their binding and uptake into EGFR-expressing tumor cells was quantified. At scFv densities greater than 148 scFv/IL, there was no effect of scFv affinity on IL binding and uptake into tumor cells, or on cytotoxicity. At lower scFv densities, there was less uptake and binding for ILs constructed from the very low affinity C10 scFv. The results show the importance of antibody fragment density on nanoparticle uptake, and suggest that engineering ultrahigh affinity scFv may be unnecessary for optimal nanoparticle targeting.     

CD3ε和PMA对fas基因转录调控作用的研究

研究了ＣＤ３ε和ＰＭＡ对细胞凋亡基因ｆａｓ的转录调控作用．根据已知的人ｆａｓ基因５＇上游序列设计引物,用ＰＣＲ法从人胸腺细胞基因组ＤＮＡ中扩增出ｆａｓ５＇上游长为４４６ｂｐ的启动子片段．将此片段定向克隆到以虫荧光素酶为报告基因的真核细胞表达载体ｐＸＰ２中．经限制性内切酶酶切鉴定及序列测定分析表明此重组表达质粒ＤＮＡ的结构和序列正确．用此质粒（ｐＸＰ２－ｆａｓｕｐ）瞬时转染人ＪｕｒｋａｔＴ淋巴细胞,分析报告基因的表达水平．结果表明ｆａｓ基因上游－５０６到－６０的区域有弱启动子活性,约是阴性对照的１．５倍．抗ＣＤ３ε抗体和ＰＭＡ处理均可增强ｆａｓ启动子的活性,促进报告基因的表达,其虫荧光素酶活性分别是未经处理的ｐＸＰ２－ｆａｓｕｐ转染细胞的１．７倍和３．３倍,但二者没有协同作用．ＰＫＣ的抑制剂ｓｔａｕｒｏｓｐｏｒｉｎｅ和ＰＴＫ的抑制剂ｈｅｒｂｉｍｙｃｉｎＡ可抑制ＰＭＡ诱导的ｆａｓ基因转录,使虫荧光素酶基因的表达降至未用ＰＭＡ处理的水平．但ＰＴＫ的另一种抑制剂ｇｅｎｉｓｔｅｉｎ可与ＰＭＡ发挥协同作用,上调ｆａｓ基因的转录,使虫荧光素酶活性增加到５倍．这些结果为阐明ＣＤ３ε及ＰＭＡ介导Ｔ淋巴细胞激活和凋亡的分子机制     

人可溶性肿瘤坏死因子受体Ⅱ与IgG Fc融合蛋白在乳酸克鲁维酵母菌中的表达及产物分析

目的:在乳酸克鲁维酵母中表达人可溶性肿瘤坏死因子受体Ⅱ(sTNFRⅡ)与IgG Fc的融合蛋白。方法:首先获得sTNFRⅡ-IgGFc融合基因片段,然后构建至乳酸克鲁维酵母表达载体pKLAC1中,获得sTNFRⅡ-IgGFc的表达载体,并将其电转化乳酸克鲁维酵母(Δura3),通过ELISA方法筛选高表达sTNFRⅡ-IgGFc融合蛋白的重组乳酸克鲁维酵母菌株,采用还原和非还原SDS-PAGE分析融合蛋白是否形成二聚体结构,Western印迹验证sTNFRⅡ-IgGFc融合蛋白在乳酸克鲁维酵母(Δura3)中的表达。结果:构建了sTNFRⅡ-IgGFc表达载体pKLAC1-sTNFRⅡ-IgGFc,获得了表达sTNFRⅡ-IgGFc的乳酸克鲁维酵母菌株,SDS-PAGE和Western印迹表明该融合蛋白能自发形成类似于抗体的二聚体结构。结论:实现了sTNFRⅡ-IgGFc融合蛋白在乳酸克鲁维酵母(Δura3)中的表达。     

PLCε1: A potential target of RNA interference therapy for gastric cancer

Phospholipase C epsilon 1 (PLCε1) has been recently identified as a novel potential biomarker for gastric cancer because of its critical role in inflammation and tumorigenesis. Until now, there are no further reports to investigate the feasibility of gene therapy by suppressing PLCε1 expression for gastric cancer. In this study, a small interfering RNA (shRNA) targeting PLCε1 was firstly transfected into gastric cancer cells in order to silence PLCε1 expression. Both mRNA and protein expression of PLCε1 in gastric cancer cells significantly reduced by RT-PCR and Western blotting analysis. Moreover, subsequent results revealed that PLCε1 shRNA depressed the in vitro and in vivo growth of gastric cancer cells by using MTT assay and tumor xenograft experiment. Furthermore, after PLCε1 shRNA transfection, the expression of proinflammatory molecules including tumor necrosis factor-α (TNF-α), cyclooxygenase 2 (COX-2), interleukin (IL)-6 and chemokine (C–X–C motif) ligand (CXCL)-1 were unaffected, but only chemokine (C–C motif) ligand (CCL)-2 expression decreased in the gastric cancer cells. It is implied that PLCε1 may inhibit the growth of gastric cancer cells via CCL-2 protein mediated pathway. These results suggest that PLCε1 might be an alternative molecular target for gastric cancer gene therapy.     

shPLCε通过下调CDC25A抑制T24细胞的瓦伯格效应

目的:探讨shPLCε对膀胱癌T24细胞瓦伯格效应的影响及其相关机制。方法:(1)慢病毒感染T24细胞,葡萄糖测定试剂盒和乳酸测试盒分别检测细胞葡萄糖利用和乳酸生成情况;q-PCR、Western blot分别检测PLCε、CDC25A及瓦伯格效应相关分子的表达。(2)转染sh CDC25A质粒,q-PCR、Western blot检测CDC25A的表达;Western blot检测瓦伯格效应相关分子的表达情况。结果:(1)慢病毒干扰PLCε后,T24细胞利用葡萄糖和生成乳酸的能力降低,同时下调CDC25A、PKM2、GLUT1、LDHA的表达。(2)干扰CDC25A的表达后可抑制PKM2、GLUT1、LDHA的表达。结论:shPLCε通过下调关键分子CDC25A的表达抑制膀胱癌T24细胞的瓦伯格效应,从而为膀胱癌的治疗提供了新思路。     

Exploring the multifaceted roles of heat shock protein B8 (HSPB8) in diseases

HSPB8 is a member of ubiquitous small heat shock protein (sHSP) family, whose expression is induced in response to a wide variety of unfavorable physiological and environmental conditions. Investigation of HSPB8 structure indicated that HSPB8 belongs to the group of so-called intrinsically disordered proteins and possesses a highly flexible structure. Unlike most other sHSPs, HSPB8 tends to form small-molecular-mass oligomers and exhibits substrate-dependent chaperone activity. In cooperation with BAG3, the chaperone activity of HSPB8 was reported to be involved in the delivery of misfolded proteins to the autophagy machinery. Through this way, HSPB8 interferes with pathological processes leading to neurodegenerative diseases. Accordingly, published studies have identified genetic links between mutations of HSPB8 and some kind of neuromuscular diseases, further supporting its important role in neurodegenerative disorders. In addition to their anti-aggregation properties, HSPB8 is indicated to interact with a wide range of client proteins, modulating their maturations and activities, and therefore, regulates a large repertoire of cellular functions, including apoptosis, proliferation, inflammation and etc. As a result, HSPB8 has key roles in cancer biology, autoimmune diseases, cardiac diseases and cerebral vascular diseases.     

One-pot enzymatic glycan remodeling of a therapeutic monoclonal antibody by endoglycosidase S (Endo-S) from Streptococcus pyogenes

A facile, one-pot enzymatic glycan remodeling of antibody rituximab to produce homogeneous high-mannose and hybrid type antibody glycoforms is described. This method was based on the unique substrate specificity of the endoglycosidase S (Endo-S) from Streptococcus pyogenes. While Endo-S efficiently hydrolyzes the bi-antennary complex type IgG Fc N-glycans, we found that Endo-S did not hydrolyze the “ground state” high-mannose or hybrid glycoforms, and only slowly hydrolyzed the highly activated high-mannose or hybrid N-glycan oxazolines. Moreover, we found that wild-type Endo-S could efficiently use high-mannose or hybrid glycan oxazolines for transglycosylation without product hydrolysis. The combination of the remarkable difference in substrate specificity of Endo-S allows the deglycosylation of heterogeneous rituximab and the transglycosylation with glycan oxazoline to take place in one-pot without the need of isolating the deglycosylated intermediate or changing the enzyme to afford the high-mannose type, hybrid type, and some selectively modified truncated form of antibody glycoforms.