Indirect effects on fitness between individuals that have never met via an extended phenotype

Interactions between organisms are ubiquitous and have important consequences for phenotypes and fitness. Individuals can even influence those they never meet, if they have extended phenotypes that alter the environments others experience. North American red squirrels (Tamiasciurus hudsonicus) guard food hoards, an extended phenotype that typically outlives the individual and is usually subsequently acquired by non‐relatives. Hoarding by previous owners can, therefore, influence subsequent owners. We found that red squirrels breed earlier and had higher lifetime fitness if the previous hoard owner was a male. This was driven by hoarding behaviour, as males and mid‐aged squirrels had the largest hoards, and these effects persisted across owners, such that if the previous owner was male or died in mid‐age, subsequent occupants had larger hoards. Individuals can, therefore, influence each other's resource‐dependent traits and fitness without ever meeting, such that the past can influence contemporary population dynamics through extended phenotypes.     

On organism: environment buffers and their ecological significance

We consider, from a physical perspective, the case where the interface between an organism and its environment becomes large enough that it acts as a buffer regulating their matter and energy exchanges. We illustrate the physiological and evolutionary role of buffers through the example of lungfish estivation. Then we ponder the relevance of buffers of this kind to the quest for a general definition of concepts like niche construction, the extended phenotype, and related ones, whose meaning is conveyed at present mostly through particular examples. Finally, we comment on the potential significance of buffers to organism—environment codetermination in the sense originally suggested by Lewontin.     

Conformational stability and three-dimensional model of the δ-opioid pharmacophore for the extended antiparallel dimer structure of Met-enkephalin in water

The conformational stability of the extended antiparallel dimer structure of Met-enkephalin in water was analyzed by examining the hydration structure of enkephalin using molecular dynamics simulations. The result shows that, despite of the hydrophicility of the terminal atoms in the pentapeptide, the main contributor for the stability of the dimer in water is the four intermolecular hydrogen bonds between the Gly² and Phe⁴ groups. The three-dimensional model of the δ-opioid pharmacophore for this dimer structure was also established. Such a model was demonstrated to match the δ-opioid pharmacophore query derived from the non-peptides SIOM, TAN-67, and OMI perfectly. This result thus strongly supports the assumption that the dimer structure of Met-enkephalin is a possible δ-receptor binding conformation. Figure Schematic model of the extended antiparallel dimer structure of Met-enkephalin     

Benefits of family reunions: social support in secondary greylag goose families

Social interactions are among the most potent stressors. However, social allies may diminish stress, increase success in agonistic encounters and ease access to resources. We studied the role of social support as a major mechanism for individual stress management in families of free-ranging greylag geese (Anser anser). Greylag geese are long-term monogamous, live in a female-bonded social system, and fledged offspring stay with their parents until the next breeding season (‘primary families’). Should parents then fail to fledge young, subadults might rejoin them in summer after molt is completed (‘secondary families’). We have previously shown that primary greylag goose families reap benefits from active social support in agonistic encounters, and also excrete lower levels of immuno-reactive corticosterone metabolites (CORT, ‘passive social support’). Here we investigated how far active and passive social support continues in secondary goose families. Although we found that active support in agonistic encounters was almost absent in secondary families, subadult male geese won an increased number of agonistic encounters due to the mere presence of their secondary family. Particularly adult and subadult females benefited from passive social support through decreased CORT, whereas males did not. Decrease in the hormonal stress response during challenging situations, induced by social allies, may help the females' long-term energy management, thereby improving the odds for successful future reproduction. We discuss whether joining a secondary family may be an alternative tactic for young geese towards optimizing their start into a complex social life.     

微信平台健康教育在肺心病患者延续护理中的应用

目的：探讨微信平台健康教育在慢性肺源性心脏病（肺心病）患者延续护理中的效果,为临床护理工作提供依据。方法：将90名肺心病患者按出院顺序分成观察组和对照组,各45 例,对照组进行定期随访,观察组利用微信平台进行健康教育,6 个月后评价两组患者的遵医行为,并采用慢性肺源性心脏病患者生命质量测定量表（QLICD-CPHD）于患者出院时及6 个月后进行生活质量评价。结果：观察组患者具有很好的遵医行为,对照组遵医行为较差,两组比较有显著差异（P<0.01）。两组患者干预前生活质量比较无显著差异（P＞0.05）;观察组在干预前后,生活质量各模块无明显改变（P＞0.05）,对照组生活质量各模块明显降低,与观察组比较,差异有统计学意义（P<0.05）。结论：微信教育在一定程度上能够地提高患者的遵医行为,弥补传统健康教育的不足,提升了健康教育的效果,值得临床借鉴。     

Site-selective binding of Zn(II) to metallo-β-lactamase L1 from Stenotrophomonas maltophilia

Extended X-ray absorption fine structure studies of the metallo-β-lactamase L1 from Stenotrophomonas maltophilia containing 1 and 2 equiv of Zn(II) and containing 2 equiv of Zn(II) plus hydrolyzed nitrocefin are presented. The data indicate that the first, catalytically dominant metal ion is bound by L1 at the consensus Zn₁ site. The data further suggest that binding of the first metal helps preorganize the ligands for binding of the second metal ion. The di-Zn enzyme displays a well-defined metal–metal interaction at 3.42 Å. Reaction with the β-lactam antibiotic nitrocefin results in a product-bound species, in which the ring-opened lactam rotates in the active site to present the S1 sulfur atom of nitrocefin to one of the metal ions for coordination. The product bridges the two metal ions, with a concomitant lengthening of the Zn–Zn interaction to 3.62 Å.     

An Empirical Comparison of Parametric and Semiparametric Cure Models

Parametric and semiparametric cure models have been proposed for cure proportion estimation in cancer clinical research. In this paper, several parametric and semiparametric models are compared, and their estimation methods are discussed within the framework of the EM algorithm. We show that the semiparametric PH cure model can achieve efficiency levels similar to those of parametric cure models, provided that the failure time distribution is well specified and uncured patients have an increasing hazard rate. Therefore the semiparametric model is a viable alternative to parametric cure models. When the hazard rate of uncured patients is rapidly decreasing, the estimates from the semiparametric cure model tend to have large variations and biases. However, all other models also tend to have large variations and biases in this case.     

Source & Sourceability: Towards a probabilistic framework for dendroprovenance based on hypothesis testing and Bayesian inference

Long-distance procurement of timber was necessary for the construction of Ancestral Pueblo Great Houses in Chaco Canyon, New Mexico. A number of higher-altitude tree sources were available within 30–70 km, though some isolated trees may have been acquired more locally. Highly regional tree ring variations enable matching some construction timbers to their source. Here, a method is developed which 1) develops a rejection criteria for ruling out sources for a tree ring sequence, 2) quantifies the relative spatial representation of a given source sequence, and 3) applies Bayes theorem to calculate posterior probabilities of source attribution. The application of this method in part supports past sourcing work, but indicates that the majority (59–64%) of timbers cannot be ascribed with even low confidence to the most common high-altitude sources. This analysis supports a model of diverse tree acquisition from a number of different sources, though with high uncertainty for a majority of timbers used in the present study.     

Ecosystem implications of genetic variation in water-use of a dominant riparian tree

Genetic variation in dominant species can affect plant and ecosystem functions in natural systems through multiple pathways. Our study focuses on how genetic variation in a dominant riparian tree (Populus fremontii, P. angustifolia and their natural F₁ and backcross hybrids) affects whole-tree water use, and its potential ecosystem implications. Three major patterns were found. First, in a 12-year-old common garden with trees of known genetic makeup, hybrids had elevated daily integrated leaf-specific transpiration (E_tl ; P=0.013) and average canopy conductance (G_c ; P=0.037), with both E_tl and G_c ~30% higher in hybrid cross types than parental types. Second, ¹³C values of leaves from these same trees were significantly more negative in hybrids (P=0.004), and backcross hybrids had significantly more negative values than all other F₁ hybrid and parental types (P <0.001). Third, in the wild, a similar pattern was found in leaf ¹³C values where both hybrid cross types had the lowest values (P <0.001) and backcross hybrids had lower ¹³C values than any other tree type (P <0.001). Our findings have two important implications: (1) the existence of a consistent genetic difference in whole-tree physiology suggests that whole-tree gas and water exchange could be another pathway through which genes could affect ecosystems; and (2) such studies are important because they seek to quantify the genetic variation that exists in basic physiological processes—such knowledge could ultimately place ecosystem studies within a genetic framework.