热风干燥温度对荷叶离褶伞干燥特性及挥发性风味物质的影响

为探究不同热风干燥温度对荷叶离褶伞干燥特性及挥发性风味物质的影响。本研究比较了8种常见干燥动力学模型对荷叶离褶伞干燥过程拟合的适用性,采用GC-IMS技术,对不同干燥温度处理下荷叶离褶伞的挥发性风味物质进行测定。结果表明：荷叶离褶伞热风干燥为典型的降速干燥,Midilli-Kucuk模型可以较好地描述其热风干燥过程（R²>0.99791,RMSE<0.0152,χ²<2.31×10^-4）;温度对荷叶离褶伞风味物质影响显著,在5个干燥温度处理下的荷叶离褶伞中共鉴定到47种挥发性风味物质,包括醛类13种、酮类8种、醇类13种、酯类5种和其他类8种。随着干燥温度升高（55-75℃）,醛类物质相对含量呈下降趋势,而醇类、酮类以及其他物质（乙酸等）略有上升趋势。     

云南特有螺类光肋螺蛳主要生物学特征研究

光肋螺蛳（Margarya mansugi）是仅分布于云南省的特有螺类。受过度捕捞、栖息环境破坏等人为因素影响,光肋螺蛳自然种群急剧萎缩,目前已被世界自然保护联盟列为极危物种。由于光肋螺蛳的研究资料匮乏,其生物学特征尚未被完全掌握,制约了光肋螺蛳保护对策的制定。为此,通过室内人工驯养观察,记述了光肋螺蛳的形态、活动习性、食性、生长和繁殖等主要生物学特征。光肋螺蛳壳质厚且坚硬,呈长圆锥形,褐色,角质厣,螺壳一般有5~6个螺层,体螺层有4条环肋,雌螺体型一般比同龄雄螺大;喜栖息在水体底层,夜晚活动频率明显高于白天;主要以藻类为食,成螺经驯化可摄食人工配合饲料;仔螺、幼螺和成螺的生长速度顺次降低;性成熟时间需要两年以上,卵胎生,终年生产,一般在白天交配,交配时间7~10 h,分批产仔,每次产仔1~2只,观察到的一只雌螺分9批产仔,共产仔螺14只。从受精到仔螺产出需85 d以上。本研究可为光肋螺蛳基础生物学研究积累资料,同时也可为高原湖泊特有螺类的人工驯养繁育提供参考。     

暗黑菌(Atribacteria)的环境分布和功能特征

暗黑菌门包括OP9和JS1两大分支,成员大多为未培养微生物,在自然环境中广泛分布,并且在部分环境如厌氧海洋沉积物、地热环境以及油藏中为优势微生物。基于基因组信息的研究表明,暗黑菌为严格的厌氧微生物,同时具有降解糖类、小分子酸、短链正构烷烃的能力,在地球碳循环过程中可能扮演着重要的角色。然而,由于缺乏相应代表性的纯培养菌株,对于暗黑菌的生理生化功能推测仍有待验证。文章概述了暗黑菌的发现及发展历史,分析了其环境分布和多样性,简述了目前提出的三种代谢方式,提出了未来暗黑菌的研究发展方向。     

A new method for post Genome-Wide Association Study (GWAS) analysis of colorectal cancer in Taiwan

Recently, single nucleotide polymorphisms (SNPs) located in specific loci or genes have been identified associated with susceptibility to colorectal cancer (CRC) in Genome-Wide Association Studies (GWAS). However, in different ethnicities and regions, the genetic variations and the environmental factors can widely vary. Therefore, here we propose a post-GWAS analysis method to investigate the CRC susceptibility SNPs in Taiwan by conducting a replication analysis and bioinformatics analysis. One hundred and forty-four significant SNPs from published GWAS results were collected by a literature survey, and two hundred and eighteen CRC samples and 385 normal samples were collected for post-GWAS analysis. Finally, twenty-six significant SNPs were identified and reported as associated with susceptibility to colorectal cancer, other cancers, obesity, and celiac disease in a previous GWAS study. Functional analysis results of 26 SNPs indicate that most biological processes identified are involved in regulating immune responses and apoptosis. In addition, an efficient prediction model was constructed by applying Jackknife feature selection and ANOVA testing. As compared to another risk prediction model of CRC for European Caucasians population, which performs 0.616 of AUC by using 54 SNPs, the proposed model shows good performance in predicting CRC risk within the Taiwanese population, i.e., 0.724 AUC by using 16 SNPs. We believe that the proposed risk prediction model is highly promising for predicting CRC risk within the Taiwanese population. In addition, the functional analysis results could be helpful to explore the potential associated regulatory mechanisms that may be involved in CRC development.     

Host genetic risk factors for community-acquired pneumonia

This study was conducted to establish the contribution of genetic host factors in the susceptibility to community acquired pneumonia (CAP) in the Russian population. Patients with CAP (n = 334), volunteers without a previous history of CAP, constantly exposed to infectious agents, control A group (n = 141) and a second control group B consisted of healthy persons (n = 314) were included in the study. All subjects were genotyped for 13 polymorphic variants in the genes of xenobiotics detoxification CYP1A1 (rs2606345, rs4646903, and rs1048943), GSTM1 (Ins/del), GSTT1 (Ins/del), ABCB1 rs1045642); immune and inflammation response IL-6 (rs1800795), TNF-a (rs1800629), MBL2 (rs7096206), CCR5 (rs333), NOS3 (rs1799983), angiotensin-converting enzyme ACE (rs4340), and occlusive vascular disease/hyperhomocysteinemia MTHFR (rs1801133). Seven polymorphic variants in genes CYP1A1, GSTM1, ABCB1, NOS3, IL6, CCR5 and ACE were associated with CAP. For two genes CYP1A1 and GSTM1 associations remained significant after correction for multiple comparisons. Multiple analysis by the number of all risk genotypes showed a highly significant association with CAP (P = 2.4 × 10^− 7, OR = 3.03, 95% CI 1.98–4.64) with the threshold for three risk genotypes. Using the ROC-analysis, the AUC value for multi-locus model was estimated as 68.38.     

Compensatory nature of Chargaff’s second parity rule

The second parity rule of Chargaff (A≈T and G≈C within one strand) holds all over the living world with minor exceptions. It is maintained with higher accuracy for long sequences. The question addressed in the article is how different sequence types, with different biases from the parity, contribute to the general effect. It appears that the sequence segments with biases of opposite sign are intermingled, so that with sufficient sequence lengths the parity is established. The parity rule seems to be a cumulative result of a number of independent processes in the genome evolution, with the parity as their intrinsic property. Symmetrical appearance of simple repeats and of Alu sequences in the human DNA strands, and other contributions to the Chargaff parity II rule are discussed.     

The Algicidal Characteristics of One Algae-Lysing FDT5 Bacterium on Microcystis aeruginosa

One strain of algicidal bacterium which can inhibit Harmful algal blooms (HABs), FDT5, was isolated from activated sludge and found to have good algicidal effects on Microcystis aeruginosa. It was revealed that: The FDT5 was a Gram-negative bacterium and identified as Ochrobactrum sp.; The greater the initial bacterial cell density, the faster the degradation of chlorophyll a.; The algicidal efficiency was evaluated at the most favorable conditions which were a temperature of 30–35°C, a pH of 7.6 and complete darkness; The FDT5 strain lysed Microcystis aeruginosa not directly but by secreting metabolites which could withstand high temperatures and pressure.     

First Report of Black Leaf Spot Caused by Alternaria alternata on Ramie in China

In 2012 and 2013, black leaf spot disease was observed on ramie plants in Hunan and Hubei Provinces, China. In the field, the symptoms of this disease included dark green to black big spots on leaves, often resulting in upwardly curled leaf margins. The pathogen isolates were identified as Alternaria alternata (Fr.) Keissler on the basis of morphology and sequence similarity of 99–100% to the published data for internal transcribed spacer (ITS), and glyceraldehyde‐3‐phosphate dehydrogenase (gdp). To our knowledge, this is the first report of Alternaria leaf spot of ramie in China.     

贵州喀斯特区C4植物物种组成与水分生态型划分

该研究通过查阅文献、核对贵州大学林学院标本库及现场群落调查与标本采集,并运用碳同位素比值法研究典型C_4植物水分利用特性,探索C_4植物在喀斯特植被恢复中的地位,进而揭示贵州喀斯特地区C_4植物资源的基本特征。结果表明:贵州喀斯特区共有C_4植物141种,隶属于74属15科,分别占全国科属种的62.50%、46.25%、24.48%,以禾本科(Gramineae)和莎草科(Cyperaceae)为主;区内C_4植物种均为一年生或多年生草本,多年生植物种略多于一年生植物种;水分生态型整体偏旱生,旱生和中生植物分别占总数的24.82%和31.21%;喀斯特区C_4植物具有高水分利用效率,但不同水分生态型间差异不显著;贵州喀斯特区C_4植物资源具有资源丰富、利用途径广泛、能长期利用、竞争力强、能大面积分布、偏旱生且水分利用幅度广的基本特征,适合喀斯特区生境,自然状态下多为恢复早期物种,有利于喀斯特区生态恢复。在贵州喀斯特恶劣生态环境下C_4植物有较好的生态适应性,并表现出较高的药用、食用、饲用、景观应用等价值,对其开发利用对贵州经济、社会发展及生态恢复有重要意义。