Deterioration of medieval painting in the chapel of the Holy Nail, Siena (Italy) partially treated with Paraloid B72

Painted surfaces in the Chapel of the Holy Nail in the medieval ex-hospital of Siena show five areas of oxidation and blackening. Most were treated with Paraloid B72 acrylic resin 40 years ago. To study deterioration of the painted surfaces by scanning microscopy with X-ray dispersion microanalysis, fragments obtained from the five areas were analyzed directly and after hydration. Hydrated fragments treated with Paraloid showed a compact, shiny, impermeable surface. The acrylic resin forms a layer that inhibits interaction of the painting with the environment, including transpiration and gaseous exchange. Element composition of paint layers of different colours revealed gold, iron (oxides in ochre) and lead (oxide) tempered with lime and/or gypsum. A few microbial cells were found on all fragments. To study biological deterioration in the five areas, fragments were hydrated and incubated in minimal culture medium without added carbon source to select bacteria capable of using carbon sources in the medieval fresco. Analysis did not reveal any spores or hyphae, and excluded physical and mechanical damage. Bacteria of the genus Bacillus were isolated only from untreated samples. Paraloid resin forms an inert film over the mural, preventing access to microbes able to use nutrient sources in the painted layer. The screening of 16S rRNA libraries from enrichment cultures showed wide phylogenetic diversity. Forty-four percent of the clones retrieved from the clone library were affiliated with the order Firmicutes, confirming the prevalence of aerobic spore-formers among the colonizing microflora. Firmicutes therefore presumably produced extracellular material which made water available to other bacteria which may have converted thiosulphate in the medieval tempera to sulphur globules. Sulphur is a known oxidant of metallic pigments, in this case aluminium, which may explain the blackening of the untreated sample.     

Divergent responses of Atlantic cod to ocean acidification and food limitation

In order to understand the effect of global change on marine fishes, it is imperative to quantify the effects on fundamental parameters such as survival and growth. Larval survival and recruitment of the Atlantic cod (Gadus morhua) were found to be heavily impaired by end‐of‐century levels of ocean acidification. Here, we analysed larval growth among 35–36 days old surviving larvae, along with organ development and ossification of the skeleton. We combined CO₂ treatments (ambient: 503 µatm, elevated: 1,179 µatm) with food availability in order to evaluate the effect of energy limitation in addition to the ocean acidification stressor. As expected, larval size (as a proxy for growth) and skeletogenesis were positively affected by high food availability. We found significant interactions between acidification and food availability. Larvae fed ad libitum showed little difference in growth and skeletogenesis due to the CO₂ treatment. Larvae under energy limitation were significantly larger and had further developed skeletal structures in the elevated CO₂ treatment compared to the ambient CO₂ treatment. However, the elevated CO₂ group revealed impairments in critically important organs, such as the liver, and had comparatively smaller functional gills indicating a mismatch between size and function. It is therefore likely that individual larvae that had survived acidification treatments will suffer from impairments later during ontogeny. Our study highlights important allocation trade‐off between growth and organ development, which is critically important to interpret acidification effects on early life stages of fish.     

Classification and nomenclature of endogenous retroviral sequences (ERVs): Problems and recommendations

The genomes of many species are crowded with repetitive mobile sequences. In the case of endogenous retroviruses (ERVs) there is, for various reasons, considerable confusion regarding names assigned to families/groups of ERVs as well as individual ERV loci. Human ERVs have been studied in greater detail, and naming of HERVs in the scientific literature is somewhat confusing not just to the outsider. Without guidelines, confusion for ERVs in other species will also probably increase if those ERVs are studied in greater detail. Based on previous experience, this review highlights some of the problems when naming and classifying ERVs, and provides some guidance for detecting and characterizing ERV sequences. Because of the close relationship between ERVs and exogenous retroviruses (XRVs) it is reasonable to reconcile their classification with that of XRVs. We here argue that classification should be based on a combination of similarity, structural features, (inferred) function, and previous nomenclature. Because the RepBase system is widely employed in genome annotation, RepBase designations should be considered in further taxonomic efforts. To lay a foundation for a phylogenetically based taxonomy, further analyses of ERVs in many hosts are needed. A dedicated, permanent, international consortium would best be suited to integrate and communicate our current and future knowledge on repetitive, mobile elements in general to the scientific community.     

Discriminating causes from consequences of persistent parrotfish corallivory

A detailed understanding of the dual role of parrotfish as both key herbivores and potentially important corallivores is essential to the study of coral health and reef trophodynamics. Some Caribbean parrotfish regularly consume live coral, and discriminate both among coral species and among colonies within a particular species. While they prefer Montastraea spp. corals, which are dominant Caribbean reef builders, causes of selective and persistent grazing of certain colonies remain unknown. We manipulated coral exposure to parrotfish grazing through a long-term cage exclusion experiment in Belize, comparing initially grazed vs. intact (non-grazed) Montastraea spp. colonies. We measured nutrition-related characteristics (C:N ratio, %C, and %N) as well as defensive characteristics (nematocyst density and skeletal hardness) to determine if any of these variables accurately predicted parrotfish grazing. There were substantial reductions in coral nutritional quality (C:N) associated with parrotfish grazing, although these changes appear to be a consequence rather than a cause of parrotfish selectivity. Likewise, nematocyst densities were suppressed in grazed corals, also likely a result of chronic grazing stress. We found no intraspecific differences in skeletal hardness related to grazing. These results provide further demonstration of the physiological consequences of grazing, but the cause of preferential grazing by parrotfishes on certain Montastraea spp. colonies still requires further investigation.     

Zn、Cd及其复合对小麦幼苗吸收Ca、Fe、Mn的影响

研究了溶液培养条件下Cd、Zn及其复合对小麦幼苗吸收Ca、Fe、Mn的影响.结果表明,小麦幼苗对Zn、Cd的吸收随溶液中Cd²⁺、Zn²⁺浓度的升高而增加,Cd、Zn同时存在时与其单独作用时幼苗对它们的吸收不同,Zn影响幼苗对Cd的吸收,Cd对Zn的吸收起抑制作用.Ca、Mn的吸收随溶液中Cd²⁺、Zn²⁺浓度升高而呈下降趋势,在Cd单独处理组和Zn单独处理组中Fe的吸收随Cd²⁺、Zn²⁺浓度升高而增加,但在Zn+Cd处理组中,Fe的吸收则呈下降趋势,其效应方式还与作物具体部位有关.     

The Content Levels of Chemical Elements of Plants in the Castanozems Typical Steppe Zone of Nei Monggol

The contents of N, P, K, Ca, S, Fe, Al, Si, Na, of 122 plant species in the XiLin River valley in Nei Monggol were studied. These results have shown as follows: 1. The contents of N, P. K, Ca, S, Fe, Al, Si, Na of 122 plants belong to three levels: N, K, Ca are 101-100(%) P, S, Si, Na are 100-10-1(%); Fe, A1 are 10-1-10-2(%). 2. The contents of chemical elements of 122 plants were divided into three levels (high, middle and low content). The range of the content and the number of plants in each level were obtained.     

Association between the XRCC3 T241M polymorphism and risk of cancer: Evidence from 157 case–control studies

The T241M polymorphism in the X-ray cross-complementing group 3 (XRCC3) had been implicated in cancer susceptibility. The previous published data on the association between XRCC3 T241M polymorphism and cancer risk remained controversial. Hence, we performed a meta-analysis to investigate the association between cancer susceptibility and XRCC3 T241M (61,861 cases and 84,584 controls from 157 studies) polymorphism in different inheritance models. We used odds ratios with 95% confidence intervals to assess the strength of the association. Overall, significantly increased cancer risk was observed in any genetic model (dominant model: odds ration [OR] = 1.07, 95% confidence interval [CI] = 1.00–1.13; recessive model: OR = 1.15, 95% CI = 1.08–1.23; additive model: OR = 1.17, 95% CI = 1.08–1.28) when all eligible studies were pooled into the meta-analysis. In further stratified and sensitivity analyses, the elevated risk remained for subgroups of bladder cancer and breast cancer, especially in Caucasians. In addition, significantly decreased lung cancer risk was also observed. In summary, this meta-analysis suggests the participation of XRCC3 T241M in the susceptibility for bladder cancer and breast cancer, especially in Caucasians, and XRCC3 T241M polymorphism is associated with decreased lung cancer risk. Moreover, our work also points out the importance of new studies for T241M association in some cancer types, such as gastric cancer, colorectal cancer, and melanoma skin cancer, where at least some of the covariates responsible for heterogeneity could be controlled, to obtain a more conclusive understanding about the function of the XRCC3 polymorphism in cancer development.     

喀喇昆仑、昆仑山地区植物元素含量的区域分异和数量分析

对喀喇昆仑、昆仑山地区87种植物21个元素含量及区域分异的研究表明,Ca、Cr、Cd、Fe、V含量比高等植物含量偏高,Ph、P的含量偏低。同种植物在不同地点元素含量有差异。盐柴荒漠植物中Na、K、Mg、P含量较高;高山草甸、冰缘植被植物Ba、Ca、Fe、V、Ti含量较高。各植被类型植物元素含量Na/K差异最大,Ca/Mg较小,Fe/Al差异最小。其变异系数分别为153.5、20.5和15.9.%