Distribution, endemism and threat status of freshwater fishes in the Western Ghats of India

Aim To study (1) the large-scale distribution patterns of freshwater fishes in the Western Ghats of India; (2) the endemism and uniqueness of the fishes in various zones; and (3) the threat status of fishes by categorizing them under low risk (LR), vulnerable (VU), endangered (EN) and critically endangered (CR). Location The Western Ghats of India. Methods The scientific literature describing the freshwater fishes of the Western Ghats was reviewed. Data describing the lists of the species were extracted and complied. The species accumulation curve was plotted using Michaelis–Menten-like equation. The Western Ghats was divided into six zones and similarity of the species was calculated using Jacquard's index. Results Literature to date records 288 species belonging to 12 orders, 41 families and 109 genera, of which 118 species are endemic and 51 are unique. However, the species accumulation curve shows that there might be 345 species in this region, indicating that 16% species have not been recorded to date. An analysis of the distribution pattern of fishes in the Western Ghats suggests that the southern region is more diverse than the northern and central regions. The southern region shows high endemism and high uniqueness while the northern region shows high endemism but less uniqueness. The similarity index between the zones indicates that as the distance between the zones increases similarity decreases. The status of 105 of 288 species was not known due to data deficiency but among the remaining 183 species, 58 species were categorized as LR, 41 as VU, 54 as EN, 24 as CR while the remaining six species were introduced. Conclusions The distribution patterns of fishes in the Western Ghats are discussed in accordance with the geography of Western Ghats, its climatic conditions and ‘Satpura Hypothesis’. The threat status of fishes found in Western Ghats suggests that at least 41% of fish fauna is threatened by either being VU, EN or CR. Implication of potent conservation measures is necessary to conserve the fish fauna of Western Ghats.     

Evolutionary dynamics of ecological niche in three Rhinogobio fishes from the upper Yangtze River inferred from morphological traits

In the past decades, it has been debated whether ecological niche should be conserved among closely related species (phylogenetic niche conservatism, PNC) or largely divergent (traditional ecological niche theory and ecological speciation) and whether niche specialist and generalist might remain in equilibrium or niche generalist could not appear. In this study, we employed morphological traits to describe ecological niche and test whether different niche dimensions exhibit disparate evolutionary patterns. We conducted our analysis on three Rhinogobio fish species (R. typus, R. cylindricus, and R. ventralis) from the upper Yangtze River, China. Among the 32 measured morphological traits except body length, PCA extracted the first four principal components with their loading scores >1.000. To find the PNC among species, Mantel tests were conducted with the Euclidean distances calculated from the four principal components (representing different niche dimensions) against the pairwise distances calculated from mitochondrial cytochrome b sequence variations. The results showed that the second and the third niche dimension, both related to swimming ability and behavior, exhibited phylogenetic conservatism. Further comparison on niche breadth among these three species revealed that the fourth dimension of R. typus showed the greatest width, indicating that this dimension exhibited niche generalism. In conclusion, our results suggested that different niche dimensions could show different evolutionary dynamic patterns: they may exhibit PNC or not, and some dimensions may evolve generalism.     

The neglected tool in the Bayesian ecologist's shed: a case study testing informative priors' effect on model accuracy

Despite benefits for precision, ecologists rarely use informative priors. One reason that ecologists may prefer vague priors is the perception that informative priors reduce accuracy. To date, no ecological study has empirically evaluated data‐derived informative priors' effects on precision and accuracy. To determine the impacts of priors, we evaluated mortality models for tree species using data from a forest dynamics plot in Thailand. Half the models used vague priors, and the remaining half had informative priors. We found precision was greater when using informative priors, but effects on accuracy were more variable. In some cases, prior information improved accuracy, while in others, it was reduced. On average, models with informative priors were no more or less accurate than models without. Our analyses provide a detailed case study on the simultaneous effect of prior information on precision and accuracy and demonstrate that when priors are specified appropriately, they lead to greater precision without systematically reducing model accuracy.     

WIDESPREAD HOST‐DEPENDENT HYBRID UNFITNESS IN THE PEA APHID SPECIES COMPLEX

Linking adaptive divergence to hybrid unfitness is necessary to understand the ecological factors contributing to reproductive isolation and speciation. To date, this link has been demonstrated in few model systems, most of which encompass ecotypes that occupy relatively early stages in the speciation process. Here we extend these studies by assessing how host‐plant adaptation conditions hybrid fitness in the pea aphid, Acyrthosiphon pisum. We made crosses between and within five pea aphid biotypes adapted to different host plants and representing various stages of divergence within the complex. Performance of F1 hybrids and nonhybrids was assessed on a “universal” host that is favorable to all pea aphid biotypes in laboratory conditions. Although hybrids performed equally well as nonhybrids on the universal host, their performance was much lower than nonhybrids on the natural hosts of their parental populations. Hence, hybrids, rather than being intrinsically deficient, are maladapted to their parents’ hosts. Interestingly, the impact of this maladaptation was stronger in certain hybrids from crosses involving the most divergent biotype, suggesting that host‐dependent postzygotic isolation has continued to evolve late in divergence. Even though host‐independent deficiencies are not excluded, hybrid maladaptation to parental hosts supports the hypothesis of ecological speciation in this complex.     

An assessment of macrophyte community metrics in the determination of the ecological condition and total phosphorus concentration of Mediterranean ponds

The macrophyte vegetation of 51 ponds situated in the Duero river basin on the Northern Iberian Plateau was studied with the aim of selecting metrics that responded clearly to perturbation and that should be included in a multimetric index for assessing the ecological condition (expression of the quality of the structure and functioning of aquatic ecosystems associated with surface waters) of Mediterranean ponds. Furthermore, the specific response of metrics to the total phosphorus (TP) concentration was also investigated because of agricultural activities, which usually increase the concentration of nutrients in aquatic systems, are one of the principal types of impairment affecting ponds in the Duero basin.A total of 19 metrics representing several aspects of the structure of macrophyte communities (cover, richness, diversity) were selected as potential metrics.The strong overlap which was observed for macrophyte metrics between classes of ecological conditions (bad, poor, moderate, good, best available) and TP concentrations (>600, 600-300, 300-100, 100-50, <50 μg L⁻¹ TP) constitutes a major problem in defining and separating these classes. For this reason, Mann-Whitney U-test and discrimination efficiency were carried out to determine which of the measures best discriminated between slightly impaired sites (ponds in good or best available condition) and perturbed ponds (ponds in moderate, poor or bad condition). Most of the metrics showed significant differences (p < 0.05) between slightly impaired and perturbed ponds. However, only total cover and hydrophyte richness, which had the highest discrimination efficiency (>78%), showed no inter-quartile overlap (25th-75th percentile) between the two ecological classes. For these reasons, both total cover and hydrophyte richness were selected for the implementation of a multimetric index able to discriminate between slightly impaired and degraded Mediterranean flatland ponds.Currently, eutrophication is considered the main pressure on lakes. However, macrophyte metrics were far less sensitive to TP concentration than to ecological condition changes. This shows that other pressures are also of considerable importance. Thus, the definition of the ecological condition of lakes using macrophytes should not be based only on responses to eutrophication pressure, as has been done in some European countries.     

Grazing with Galloway cattle for floodplain restoration in the Syr Valley, Luxembourg

Three years after a river restoration scheme in the Syr Valley (Luxembourg) we investigated habitat development and habitat use of Galloway cattle deployed in a low-intensity grazing system on a permanent floodplain pasture. Habitats were delimited with a mobile GPS/GIS mapping system and their spatial development was assessed over three consecutive years. During these three years, the patches of the six habitats decreased to 40% of mean initial size, and a rapid net area expansion of wetland habitats (large sedge swamps: +100%, marsh and tall forb grasslands: +43%) was observed. The behavioural patterns and grazing preferences of the cattle were observed directly during the vegetation period in June, August and November. These observations were complemented by a transect analysis of cattle impact indicators in June and November. The cattle grazed the different habitats very selectively, as they preferred the mesophilic, and ruderal grasslands 1.6, and 5.6 times more than expected respectively. During the growing season, the grazing niche breadth declined (3.92 in June to 2.68 in November), and less preferred forage habitats like large sedge swamps were grazed primarily in the autumn. We used bite and step rates to investigate grazing intensity by habitat type. During summer, grazing intensity correlated with forage quality in the different habitat patches, whereas in autumn it was obviously influenced by the effort required to access the desired forage plants in a given habitat. The impact indicators revealed a matter transfer from riparian areas to the valley edge. Here, we give a first insight into habitat development and habitat use of Galloway cattle in a recently restored floodplain area and derive recommendations for the adaptive management of future projects.     

Paleoenvironment of Ankilitelo Cave (late Holocene, southwestern Madagascar): implications for the extinction of giant lemurs

Following human arrival, Madagascar suffered well-documented megafaunal extinctions and widespread deforestation. Although humans are widely considered to be the primary cause of the extinctions, the relative contributions of climate change and human activities to this ecological transformation remain uncertain. Reconstructing the habitats of the giant lemurs of Madagascar can provide key information for understanding the evolutionary mechanisms involved in their extinction. In this study, I present a faunal analysis of the subfossil assemblage from Ankilitelo Cave, southwestern Madagascar. This assemblage documents the latest known occurrence of five species of extinct giant lemur, in association with abundant well-preserved small mammal remains. I compared the small mammal fauna at Ankilitelo with 27 extant Malagasy mammal communities spanning the range of Madagascar's habitat types. Similarities in species composition between modern communities and Ankilitelo were assessed using cluster analysis. Ecological similarities were examined by assigning each species to dietary, locomotor, activity pattern, and body size categories. Multiple discriminant analysis was then used to classify Ankilitelo relative to modern habitat types in Madagascar, based on the ecological structure of the subfossil fauna. Results indicate that the habitat surrounding Ankilitelo during the late Holocene was similar to the succulent woodlands of modern southwestern Madagascar. This suggests that approximately 500 yr BP, these semi-arid habitats supported a subfossil lemur community that included the highly-suspensory Palaeopropithecus, and deliberate slow-climber Megaladapis, as well as Archaeolemur, Pachylemur, and Daubentonia robusta. In such environments, these giant lemurs would likely have been highly vulnerable to increasing human pressure in southwestern Madagascar.