广西十万大山地区的鱼类区系及其动物地理学分析

于1998年和1999年对广西西南部十万大山地区的鱼类区系统了调查,十万大山是我国大陆最南端的山脉,该地区共有野生鱼类102种,由于南北坡河流分属不同水系,两地的鱼类组成有很大差异,北坡各支流均汇入明江（珠江水系的一个支脉）,其鱼类组成具有明显的珠江水系特点,在中国动物地理区划上属华南区珠江亚区,南坡各水系多独流入海,鱼类组成与珠江和海南岛诸水系均有较大共性,反映出地史上这些水系之间曾有广泛的交流和联系,但与海南岛亚区的鱼类区系成分更为接近,动物地理区划应归属海南岛亚区。     

Responses of radial growth to temperature in Larix gmelinii of the Da Hinggan Ling under climate warming

Aims The Da Hinggan Ling is amongst the areas in China susceptible to climate warming. The objective of this study is to determine the responses of radial growth to temperature variations in Larix gmelinii growing in different parts of the Da Hinggan Ling in the process of climate warming, by using dendrochronological techniques. Methods We collected tree-ring samples from the southern, the middle and the northern parts of the main Da Hinggan Ling, developed site-specific ring-width chronologies, and synthesized tree-ring indices of the southern, the middle and the northern parts of the study area according to the first principal component loading factors for each chronology. The relationships between radial growth in L. gmelinii and temperature variations were determined with correlation analysis, and the differences in the responses of radial growth to temperature variations among various parts were analyzed and compared with principle component analysis. Important findings There were notable discrepancies in the effects of temperature variations on radial growth in L. gmelinii between the southern and the northern parts of the study area (the middle part > the northern part > the southern part). In the southern part, the mean monthly temperature between the previous November and April of the current year had a significant relationship with tree-ring indices (p < 0.05). In the middle part, the mean monthly temperature during March and October of the current year had a significant relationship with tree-ring indices (p < 0.05), and so did the mean monthly temperature during June and August of the previous year (p < 0.05). The mean monthly temperature during April and May of the current year had a highly significant relationship with tree-ring indices in the northern part (p < 0.01). This study suggests that the warmer and drier regional climate condition caused by elevated temperature has resulted in that soil moisture becomes the main factor limiting the radial growth, and the relationship between tree growth and temperature variations signified with aggravated soil drought under climate warming. The productivity in L. gmelinii as reflected by basal area increment experienced a shift response from cold stress to water stress. In addition, the radial growth in L. gmelinii in the Da Hinggan Ling will likely to show a declining trend in the southern and the middle parts, and an increasing trend in the northern part, in response to rapid warming in the coming decades.     

Upper Cretaceous rudist biostratigraphy of the Bey Da?lar? Carbonate Platform, Western Taurides, SW Turkey

The Upper Cretaceous (Middle Cenomanian-Coniacian) successions of the Bey Da?lar? Carbonate Platform (Western Taurides, SW Turkey) are represented by rudist-bearing shallow-water limestones. Four rudist lithosomes are distinguished for the first time from the Eastern, Northern and Southern Areas of the Bey Da?lar? Autochthon. The oldest rudist assemblages dominated by caprinids are observed in the Eastern (Katran Da?) Area (caprinid lithosomes) and suggest a Middle-Late Cenomanian age. The uppermost part of the platform carbonates in the Northern Area is characterized by an association of hippuritid and radiolitid rudist bivalves dominated by Vaccinites praegiganteus (Toucas) (hippuritid lithosomes). The rudist fauna indicates the Late Turonian age, which is confirmed by the previously obtained ⁸⁷Sr/⁸⁶Sr values of well-preserved low-Mg calcite of Vaccinites praegiganteus (Toucas) shells. The rudist associations of the Southern (Susuzda?) Area are represented by two rudist formations. The lower lithosomes are mainly made up of hippuritids and radiolitids (hippuritid-radiolitid lithosomes). The stratigraphical distributions of the species of the assemblage indicate a Santonian-Early Campanian age. The rudist associations of the upper lithosomes are dominated by species of Joufia and Gorjanovicia (Joufia-Gorjanovicia lithosomes), which suggest a Late Campanian-Maastrichtian age. Identification of the rudist lithosomes yields information on the palaeobiogeographic distribution of the rudist species in the eastern Mediterranean region and also on the biostratigraphic frame of the Upper Cretaceous successions of the Bey Da?lar? Carbonate Platform.     

A soluble acid invertase is directed to the vacuole by a signal anchor mechanism

Enzyme activities in the vacuole have an important impact on the net concentration of sucrose. In sugarcane (Saccharum hybrid), immunolabelling demonstrated that a soluble acid invertase (β-fructofuranosidase; EC 3.2.1.26) is present in the vacuole of storage parenchyma cells during sucrose accumulation. Examination of sequences from sugarcane, barley and rice showed that the N-terminus of the invertase sequence contains a signal anchor and a tyrosine motif, characteristic of single-pass membrane proteins destined for lysosomal compartments. The N-terminal peptide from the barley invertase was shown to be capable of directing the green fluorescent protein to the vacuole in sugarcane cells. The results suggest that soluble acid invertase is sorted to the vacuole in a membrane-bound form.     

Distribution and radical scavenging activity of phenols in Ascophyllum nodosum (Phaeophyceae)

Phlorotannins have been purified and fractionated in the brown alga Ascophyllum nodosum using successively differential extraction, liquid-liquid separation and dialysis. Both the phenol content and the radical scavenging capacity of the resulting fractions were assayed by the Folin-Ciocalteu test and the DPPH method, respectively, whilst purity of the fractions was assessed by ¹H NMR analysis. The purification process resulted in the isolation of six fractions from each crude extract with only minor losses. High levels of phenols, up to 97-99%, were measured in semi-purified fractions containing phlorotannins more than 50 kDa in average molecular size, accounting for more than 95% of the ethyl acetate phenol pool. As a consequence, purity decreased in ethyl acetate fractions together with the molecular size of compounds. The importance of differential extraction based on the polarity of phenols is highlighted by the fact that most of these compounds were found in the ethyl acetate fraction after the first extraction step in 100% methanol, whilst two thirds of phenols extracted by 50% methanol remained in the aqueous phase. The radical scavenging activity of the fractions was correlated with the phenol content and was maximal in complete ethyl acetate fractions and in dialysis concentrates containing molecules more than 50 kDa in size. The specific activity of phenols was found to be maximal for molecules smaller than 2 kDa when isolated from the 100% methanol extract and 1-4 times smaller in the water phase separated from the same extract. The distribution of radical-scavenging potentials in the phenol pool of A. nodosum supports the idea that physiological roles and putative uses of phlorotannins are under the control of a polarity-molecular size complex.     

Plasticity of the TSG-6 HA-binding loop and mobility in the TSG-6-HA complex revealed by NMR and X-ray crystallography

Tumour necrosis factor-stimulated gene-6 (TSG-6) is a glycosaminoglycan-binding protein expressed during inflammatory and inflammation-like processes. Previously NMR structures were calculated for the Link module of TSG-6 (Link_TSG6) in its free state and when bound to an octasaccharide of hyaluronan (HA(8)). Heparin was found to compete for HA binding even though it interacts at a site that is distinct from the HA-binding surface. Here we present crystallography data on the free protein, and (15)N NMR relaxation data for the uncomplexed and HA(8)-bound forms of Link_TSG6. Although the Link module is comparatively rigid overall, the free protein shows a high degree of mobility in the beta4/beta5 loop and at the Cys47-Cys68 disulfide bond, both of which are regions involved in HA binding. When bound to HA(8), this dynamic behaviour is dampened, but not eliminated, suggesting a degree of dynamic matching between the protein and sugar that may decrease the entropic penalty of complex formation. A further highly dynamic residue is Lys54, which is distant from the HA-binding site, but was previously shown to be involved in heparin binding. When HA is bound, Lys54 becomes less mobile, providing evidence for an allosteric effect linking the HA and heparin-binding sites. A mechanism is suggested involving the beta2-strand and alpha2-helix. The crystal structure of free Link_TSG6 contains five molecules in the asymmetric unit that are highly similar to the NMR structure and support the dynamic behaviour seen near the HA-binding site: they show little or no electron density for the beta4/beta5 loop and display multiple conformations for the Cys47-Cys68 disulfide bond. The crystal structures were used in docking calculations with heparin. An extended interface between a Link_TSG6 dimer and heparin 11-mer was identified that is in excellent agreement with previous mutagenesis and calorimetric data, providing the basis for further investigation of this interaction.     

Discovery of a novel Bacillus thuringiensis Cry8D protein and the unique toxicity of the Cry8D-class proteins against scarab beetles

A novel cry gene, cry8Db, highly toxic to scarab beetles such as the Japanese beetle, Popillia japonica Newman, was cloned from an isolate of Bacillus thuringiensis(Bt), BBT2-5. The cry8Db gene has 3525 bp nucleotides and codes for a protein of 1174 amino acid residues. The protein, Cry8Db, has typical Bt characteristics such as the 8-block, conserved sequences and the three-domain 3 D toxin structure as defined with Cry3Aa. When the amino acid sequence of Cry8Db was compared with that of Cry8Da whose gene was cloned and characterized in our laboratory earlier, substantial sequence diversities were found in their Domain III. The cry8Db gene was expressed in an acrystalliferous B. thuringiensis strain, BT51. BT51 expressing cry8Db formed a spherical crystal like the natural crystal of BBT2-5. The Cry8Db protein was assayed along with the other scarab active Cry8Da and Cry8Ca against the Japanese beetle. While Cry8Da and Cry8Db had toxicity against both adults and larvae of the Japanese beetle, Cry8Ca was toxic to only larvae. Cry8Ca showed no toxicity against the adult beetle up to 30 μg per 1 cm² of leaf discs on which the protein was applied. The activation process of Cry8Db by adult and larval gut juice was compared in vitro with the processes of Cry8Da and Cry8Ca. All three proteins, Cry8Db, Cry8Da and Cry8Ca, produced a toxic core of approximately 70 kDa equally indicating that the activation process does not inactivate the adult activity of Cry8Ca. We concluded that the adult activity of Cry8D proteins is encoded in Domain II. Further tests against other beetle species showed a significant difference between Cry8D’s and Cry8Ca but no difference between Cry8Da and Cry8Db. Comparison of 3D structural models of Cry8Ca, Cry8Da and Cry8Db, which were constructed by using Cry3Bb as the structural template, indicated significant structural differences, especially between Cry8Ca and Cry8D proteins, in three major surface-exposed loops of Domain II that may be involved in determining the adult beetle activity.     

Multi-state epidemic processes on complex networks

Infectious diseases are practically represented by models with multiple states and complex transition rules corresponding to, for example, birth, death, infection, recovery, disease progression, and quarantine. In addition, networks underlying infection events are often much more complex than described by meanfield equations or regular lattices. In models with simple transition rules such as the SIS and SIR models, heterogeneous contact rates are known to decrease epidemic thresholds. We analyse steady states of various multi-state disease propagation models with heterogeneous contact rates. In many models, heterogeneity simply decreases epidemic thresholds. However, in models with competing pathogens and mutation, coexistence of different pathogens for small infection rates requires network-independent conditions in addition to heterogeneity in contact rates. Furthermore, models without spontaneous neighbor-independent state transitions, such as cyclically competing species, do not show heterogeneity effects.