Book Reviews

Dissolved organic carbon (DOC) and nitrogen (DON) derived from aquatic and terrestrial vascular plants provide a major energy and nutrient source for freshwater and coastal marine biota. The bioavailability of this material may to a large extent depend on plant species. In this study, we have compared the bioavailability of DOC and DON sampled in two distinct stands of Typha domingensisand Eleocharis mutatain a coastal tropical lake and in the adjacent ocean in the state of Rio de Janeiro, Brazil. Bioavailability of organic matter was assessed by regrowth bioassays using natural bacterial inocula. Nutrients were added to achieve carbon or nitrogen limitation. At all sampling sites, DON comprised over 95% of the total bioavailable nitrogen, suggesting its dominant role as a nitrogen source. The bioavailability of lacustrine DON (22% in the Typhastand and 34% in the Eleocharisstand) exceeded the bioavailability of DOC (8 and 10%, respectively) and exhibited a larger difference between the stands. ³H-leucine incorporation studies showed that lake bacterioplankton had a well balanced supply of C, N and P. Therefore, an accumulation of labile DON due to an excess nitrogen supply is not probable. We propose that a substantial part of the lake DON was newly formed within the macrophyte stands, while DOC was predominantly of terrestrial origin and more diagenetically changed.     

Proteomic analysis of the effects of the immunomodulatory mycotoxin deoxynivalenol

The mycotoxin deoxynivalenol (DON) contaminates cereals worldwide and is a common contaminant in the Western European diet. At high doses, DON induces acute gastrointestinal toxicity; chronic, low‐dose effects in humans are not well described, but immunotoxicity has been reported. In this study, 2‐DE was used to identify proteomic changes in human B (RPMI1788) and T (JurkatE6.1) lymphocyte cell lines after exposure to minimally toxic concentrations (up to 500 ng/mL) for 24 h. Proteins which changed their abundance post treatment, by a greater than 1.4‐fold change reproducible in three separate experiments consisting of 36 gels in total, are ubiquitin carboxyl‐terminal hydrolase isozyme L3, proteasome subunit β type‐4 and α type‐6, inosine‐5′‐monophosphate dehydrogenase 2, GMP synthase, microtubule‐associated protein RP/EB family member 1 (EB1), RNA polymerases I, II, III subunit ABC1, triosephosphate isomerase and transketolase. Flow cytometry was used to validate changes to protein expression, except for EB1. These findings provide insights as to how low‐dose exposure to DON may affect human immune function and may provide mechanism‐based biomarkers for DON exposure.     

Flippases play specific but distinct roles in the development,pathogenicity, and secondary metabolism of Fusarium graminearum

The membrane trafficking system is important for compartmentalization of the biosynthesis pathway and secretion of deoxynivalenol (DON) mycotoxin (a virulence factor) in Fusarium graminearum. Flippases are transmembrane lipid transporters and mediate a number of essential physiological steps of membrane trafficking, including vesicle budding, charging, and protein diffusion within the membrane. However, the roles of flippases in secondary metabolism remain unknown in filamentous fungi. Herein, we identified five flippases (FgDnfA, FgDnfB, FgDnfC1, FgDnfC2, and FgDnfD) in F. graminearum and established their specific and redundant functions in the development and pathogenicity of this phytopathogenic fungus. Our results demonstrate that FgDnfA is critical for normal vegetative growth while the other flippases are dispensable. FgDnfA and FgDnfD were found crucial for the fungal pathogenesis, and a remarkable reduction in DON production was observed in ΔFgDNFA and ΔFgDNFD. Deletion of the FgDNFB gene increased DON production to about 30 times that produced by the wild type. Further analysis showed that FgDnfA and FgDnfD have positive roles in the regulation of trichothecene (TRI) genes (TRI1, TRI4, TRI5, TRI6, TRI12, and TRI101) expression and toxisome reorganization, while FgDnfB acts as a negative regulator of DON synthesis. In addition, FgDnfB and FgDnfD have redundant functions in the regulation of phosphatidylcholine transport, and double deletion of FgDNFB and FgDNFD showed serious defects in fungal development, DON synthesis, and virulence. Collectively, our findings reveal the distinct and specific functions of flippase family members in F. graminearum and principally demonstrate that FgDnfA, FgDnfD, and FgDnfB have specific spatiotemporal roles during toxisome biogenesis.     

Phytoplankton uptake of ammonium, nitrate and urea in the Neuse River Estuary, NC, USA

Uptake rates of ammonium, nitrate and urea were measured during the spring, summer and autumn (2001) in the eutrophic, nitrogen (N) limited Neuse River Estuary (NRE), North Carolina, USA. Ammonium was the dominant form of N taken up during the study, contributing approximately half of the total measured N uptake throughout the estuary. Nitrate uptake declined significantly with distance downstream comprising 33% of the total uptake in the upper estuary but only 11 and 16% in the middle and lower estuary, respectively. Urea uptake contributed least to the total pool in the upper estuary (16%), but increased in importance in the middle and lower estuary, comprising 45 and 37% of the total N taken up, respectively. The importance of regenerated N for fuelling phytoplankton productivity in the mesohaline sections of the NRE is demonstrated. The contribution of urea to the regenerated N pool suggests that internal regeneration of dissolved organic N may support a large proportion of the phytoplankton primary production and biomass accumulation in the middle and lower NRE. These results suggest that N-budgets based on dissolved inorganic N uptake rates alone will seriously under estimate phytoplankton N uptake.     

Biogeochemistry of unpolluted forested watersheds in the Oregon Cascades: temporal patterns of precipitation and stream nitrogen fluxes

We analyzed long-term organic and inorganic nitrogen inputs and outputs in precipitation and streamwater in six watersheds at the H.J. Andrews Experimental Forest in the central Cascade Mountains of Oregon. Total bulk N deposition, averaging 1.6 to 2.0 kg N ha^–1 yr^–1, is low compared to other sites in the United States and little influenced by anthropogenic N sources. Streamwater N export is also low, averaging <1 kg ha^–1 yr^–1. DON is the predominant form of N exported from all watersheds, followed by PON, NH₄-N, and NO₃-N. Total annual stream discharge was a positive predictor of annual DON output in all six watersheds, suggesting that DON export is related to regional precipitation. In contrast, annual discharge was a positive predictor of annual NO₃-N output in one watershed, annual NH₄-N output in three watersheds, and annual PON output in three watersheds. Of the four forms of N, only DON had consistent seasonal concentration patterns in all watersheds. Peak streamwater DON concentrations occurred in November-December after the onset of fall rains but before the peak in the hydrograph, probably due to flushing of products of decomposition that had built up during the dry summer. Multiple biotic controls on the more labile nitrate and ammonium concentrations in streams may obscure temporal DIN flux patterns from the terrestrial environment. Results from this study underscore the value of using several watersheds from a single climatic zone to make inferences about controls on stream N chemistry; analysis of a single watershed may preclude identification of geographically extensive mechanisms controlling N dynamics.     

增温和CO2浓度加倍对川西亚高山针叶林土壤可溶性氮的影响

采用全自动微气候控制的"人工模拟气候实验系统"研究了增温和CO2浓度加倍对川西亚高山针叶林土壤硝态氮(NO_3~--N)、铵态氮(NH_4~+-N)、游离氨基酸(FAA)、可溶性有机氮(DON)和可溶性总氮(TSN)的影响。结果表明:1在种植油松苗木组,增温处理显著降低了土壤NO_3~--N含量,不同处理0—15 cm土层NO_3~--N含量均显著小于15—30 cm层;而在未种树组,增温处理显著增加了土壤NO_3~--N含量,0—15 cm土层NO_3~--N含量显著高于15—30 cm层,这表明增温促进了油松苗对NO_3~--N的吸收。2在种植油松苗木组,增温(ET)、增CO_2(EC)及两者的共同作用(ETC)均显著增加了土壤NH_4~+-N、DON和TSN含量;在未种树组,ET显著增加了土壤NH_4~+-N、FAA、DON和TSN含量,EC和ETC对NH_4~+、FAA、DON和TSN含量具有微弱影响或没有显著影响。不同处理0—15cm层土壤NH_4~+-N、FAA、DON和TSN的含量显著大于15—30 cm层。3种植油松苗木组土壤NO_3~--N、NH_4~+-N、FAA、DON和TSN含量均显著低于未种树组,这是由植物对氮素的吸收消耗造成的。研究结果表明,EC、ETC主要通过植物根系作用促进了NH_4~+-N、DON和TSN含量增加,而ET处理通过影响土壤微生物和植物根系来促进NH_4~+-N、FAA、DON和TSN含量的增加。     

杉木人工林土壤可溶性有机质及其与土壤养分的关系

通过在福建省来舟林场对不同栽植代数杉木人工林土壤可溶性有机碳(DOC)和氮(DON)及土壤养分的研究,其结果表明,随着杉木栽植代数的增加林地土壤DOC和DON含量逐渐下降,在0～10cm土层内第3代杉木林土壤DOC和DON含量分别是第1代杉木林的83.9%和87.1%、第2代杉木林的90.6%和96.9%,在10～20cm土层内第3代杉木林土壤DOC和DON含量分别是第1代杉木林的80.2%和81.5%、第2代杉木林的81.8%和90.0%。在不同林地和土层内土壤DOC含量之间的差异性达到了显著或极显著水平,而DON含量之间的差异性不显著。不同栽植代数杉木林土壤养分的变化趋势与DOM一致,随着杉木连栽,土壤养分含量呈下降趋势。在0～10cm土层内第3代杉木林土壤全氮、全钾、铵态氮和速效钾含量分别是第1代杉木林的83.1%、60.4%、68.1%和44.3%,是第2代杉木林的84.6%、68.5%、74.4%和58.7%;在10～20cm土层内第3代杉木林土壤全氮、全钾、铵态氮和速效钾含量分别是第1代杉木林的74.0%、53.4%、57.6%和54.6%,是第2代杉木林的94.8%、59.5%、74.3%和65.5%。经相关性分析,在各土层内土壤DOC和DON含量与土壤全氮、全钾、铵态氮和速效钾等土壤养分含量存在着不同程度的相关性。     

NITROGENOUS NUTRITION OF ALEXANDRIUM CATENELLA (DINOPHYCEAE) IN CULTURES AND IN THAU LAGOON,SOUTHERN FRANCE1

Alexandrium catenella (Whedon et Kofoid) Balech was isolated from Thau lagoon (northern Mediterranean) and its growth and uptake characteristics measured for nitrate, ammonium, and urea. Although affinity constants did not indicate a preference for ammonium over nitrate, there was a strong inhibition of nitrate uptake by ammonium when both nitrogen (N) sources were present. Nitrogen budgets during growth in cultures revealed major imbalances between decreases in dissolved N and increases in particulate N, indicating excretion of dissolved organic N during the early part of the growth phase and uptake during the later part. A quasi‐unialgal bloom in November 2001 (4×10⁶ cells·L^?1) allowed measurements of uptake of nitrate, nitrite, ammonium, and urea; net and gross growth rate of A. catenella; and grazing rates on this organism. The affinity constants indicate that it is not a strong competitor for the N nutrients tested when these are in low concentrations (<10 μgat N·L^?1), compared with other members of the phytoplankton community. Indirect evidence from cultures indicate that dissolved organic N compounds could be important in triggering those blooms. Finally, the strongly unbalanced growth observed in the field indicates that A. catenella exhibits a storage rather than a growth response to a nutrient pulse and is adapted to low frequency events such as the passage of frontal disturbances. The disappearance of A. catenella was due to grazing that balanced growth at the peak of the bloom.     

Solute dynamics in a North Brazilian mangrove: the influence of sediment permeability and freshwater input

Although water in mangrove sediments influences nutrient cycling in both, mangrove forest and estuary, little information exists on seasonal and vertical distribution of dissolved organic and inorganic compounds in the sediment column. We studied the influence of sediment texture and chemistry, permeability (K), tides, and rainfall on dissolved organic carbon (DOC) and nitrogen (DON), dissolved inorganic phosphate (DIP) and salinity in creek and sediment waters of a mangrove in Pará, Brazil. Water samples were taken from boreholes and piezometers in the mangrove forest and from an adjacent tidal creek at neap and spring tides, during the dry and rainy season. Forest sediment was analysed for carbon (C), nitrogen (N), salinity and permeability. Clay, C and N decreased with depth. Sediment permeability (K) was lowest (<0.1 m day⁻¹) in the upper, clay-rich and crab-burrow-free mud layer. In the deeper, fine sand strata, K ranged from 0.7 to 1.8 m day⁻¹. Tidal range in the creek was 3.5 and 5.5 m for neap and spring tides, respectively. Salinity, DOC, DON and DIP in creek water were inversely related to tidal height. Piezometer data revealed significant water level changes in deeper, sandy sediment layer, which followed, time-lagged, the tidal fluctuations. In contrast, tide did not affect the water level in the upper sediment due to low permeability. Compared with creek water, sediment water was enriched in DOC, DON and DIP because of organic matter input and mineralization. In deeper layers, solute concentration was most likely affected by sorption processes (DOC and DIP) and reduction reactions (DIP). During the rainy season, DOC and DON in creek and sediment water were higher than in the dry season. DIP appeared invariant to seasonal changes. In the rainy season, salt flushing from surface sediments resulted in higher salinities at intermediate sediment depths, while in the deeper layers salinity was lower due to exchange with water from the tidal creek.     

小麦抗赤霉病利器——他山之石

赤霉病是我国乃至世界小麦(Triticum aestivum)产区的重要病害, 给农业生产和人畜健康造成重大威胁。分离鉴定优质抗病基因、培育抗病品种, 是控制我国麦区赤霉病的重要手段。最近, 山东农业大学孔令让团队完成了二倍体长穗偃麦草(Thinopyrum elongatum)基因组的组装, 并在此基础上通过精细定位和图位克隆分离得到来自长穗偃麦草的抗赤霉病基因Fhb7。他们发现Fhb7编码1个谷胱甘肽转移酶, 对禾谷镰孢菌(Fusarium graminearum)分泌的包括呕吐毒素等在内的多种毒素具有解毒作用, 是1个广谱持久抗病基因。他们还发现Fhb7很可能最初源于内生真菌, 经过基因水平转移进入到偃麦草基因组中。此外, Fhb7不影响其它农艺性状, 且其抗性不受小麦遗传背景影响。这一系列工作揭示了作物抗病演化中的全新机制, 对小麦抗赤霉病育种以及更好地利用长穗偃麦草的丰富基因资源都具有重要意义。