Electrostatic control and chloride regulation of the fast gating of ClC-0 chloride channels

The opening and closing of chloride (Cl-) channels in the ClC family are thought to tightly couple to ion permeation through the channel pore. In the prototype channel of the family, the ClC-0 channel from the Torpedo electric organ, the opening-closing of the pore in the millisecond time range known as "fast gating" is regulated by both external and internal Cl- ions. Although the external Cl- effect on the fast-gate opening has been extensively studied at a quantitative level, the internal Cl- regulation remains to be characterized. In this study, we examine the internal Cl- effects and the electrostatic controls of the fast-gating mechanism. While having little effect on the opening rate, raising [Cl-]i reduces the closing rate (or increases the open time) of the fast gate, with an apparent affinity of >1 M, a value very different from the one observed in the external Cl- regulation on the opening rate. Mutating charged residues in the pore also changes the fast-gating properties-the effects are more prominent on the closing rate than on the opening rate, a phenomenon similar to the effect of [Cl-]i on the fast gating. Thus, the alteration of fast-gate closing by charge mutations may come from a combination of two effects: a direct electrostatic interaction between the manipulated charge and the negatively charged glutamate gate and a repulsive force on the gate mediated by the permeant ion. Likewise, the regulations of internal Cl- on the fast gating may also be due to the competition of Cl- with the glutamate gate as well as the overall more negative potential brought to the pore by the binding of Cl-. In contrast, the opening rate of the fast gate is only minimally affected by manipulations of [Cl-]i and charges in the inner pore region. The very different nature of external and internal Cl- regulations on the fast gating thus may suggest that the opening and the closing of the fast gate are not microscopically reversible processes, but form a nonequilibrium cycle in the ClC-0 fast-gating mechanism.     

Studies on the macroscopic protonation constants of some alpha-amino acids in ethanol-water mixtures

Both to demonstrate whether the predominant species are dipolar ion or the neutral form and to predict the change of dipolar form to neutral form ratio in ethanol-water mixtures, the macroscopic protonation constants of eight alpha-amino acid (glycine, L-alanine, L-valine, L-leucine, L-phenylalanine, L-serine, L-methionine, and L-isoleucine) were determined potentiometrically in 20-80% (v/v) ethanol-water mixtures at 25 degrees C with an ionic strength of 0.10 M. The calculation of the constants was carried out using a PKAS computer program. The effect of solvent composition on the protonation constants and the dipolar ionic to neutral form ratio of these acids in the mixed solvents are discussed. One can conclude that the dipolar form of amino acids, HA(+/-), dominates in ethanol-water mixtures.     

污水污泥土地投放重金属的环境效应研究进展

本文综述了污水污泥土地投放中重金属的环境效应研究方面的进展,重点就污水污泥土地投放中对植物生长的影响、对土壤微生物、土壤酶及昆虫生长的影响、重金属向地下水中的迁移情况、重金属在土壤中的生物活性变化及其影响因素、污水污泥土地投放后重金属的长期变化及土壤修复剂对重金属毒性的控制等方面的研究进展进行综述。     

Time‐Varying Latent Effect Model for Longitudinal Data with Informative Observation Times

Summary In analysis of longitudinal data, it is not uncommon that observation times of repeated measurements are subject‐specific and correlated with underlying longitudinal outcomes. Taking account of the dependence between observation times and longitudinal outcomes is critical under these situations to assure the validity of statistical inference. In this article, we propose a flexible joint model for longitudinal data analysis in the presence of informative observation times. In particular, the new procedure considers the shared random‐effect model and assumes a time‐varying coefficient for the latent variable, allowing a flexible way of modeling longitudinal outcomes while adjusting their association with observation times. Estimating equations are developed for parameter estimation. We show that the resulting estimators are consistent and asymptotically normal, with variance–covariance matrix that has a closed form and can be consistently estimated by the usual plug‐in method. One additional advantage of the procedure is that it provides a unified framework to test whether the effect of the latent variable is zero, constant, or time‐varying. Simulation studies show that the proposed approach is appropriate for practical use. An application to a bladder cancer data is also given to illustrate the methodology.     

A Report of the James Watson Lecture at Yale University

In March 2012, Nobel Prize winner James Watson gave a seminar at Yale University entitled “Driven by Ideas.” In his lecture, Watson discussed his personal vision for the future of science, specifically addressing how the scientific community should approach developing anticancer agents. He discussed the use of glycolytic inhibitors as anticancer agents due to the Warburg effect, as well as the benefits of metformin and anti-inflammatory drugs to help prevent cancer. He also compared drugs that target cell proliferation instead of targeting cell growth. Additionally, Watson commented on the mechanisms for how research should be conducted in the laboratory.     

The effects of mono- and divalent salts on the O2-evolution activity and low temperature multiline EPR spectrum of Photosystem II preparations from spinach

The ability of salts to inhibit the O₂-evolution activity of PS II preparations is shown to parallel closely the Hofmeister series, suggesting that inhibition is related to the solubility of the 16, 24 and 33 kDa proteins in these salt solutions. An examination of the effect of salt inactivation on the low temperature multiline EPR signal indicates that the release of either the 16 and 24 kDa proteins, or additionally the 33 kDa protein blocks or greatly reduces the efficiency of the advancement of the water-splitting complex to the S₂-state; under some conditions, this inhibition is reversible.     

Affinity immunosensor for milk progesterone: identification of critical parameters

The effects of several experimental parameters on the performance characteristics of a competitive-type immunochromatographic assay of milk progesterone were studied. Increasing the size of the colloidal gold particles used as a label increased both maximal signal obtained and sensitivity of the assay measured as slope of the progesterone standard curve. The concentration of the antibody used to prepare the detection zone was found to be a critical factor, in that low concentrations of antibody resulted in a poor sensitivity. The compatibilities of various buffer systems with the assay were studied. The assay worked well with buffers having a broad pH range of 4·5–8·5.     

Quantitative evaluation of atmospheric CO2 sink into forest soils from the tropics to the boreal zone during the past three decades

A model of soil carbon cycling in forest ecosystems was applied to predict the soil carbon balance in nine forest ecosystems from the tropics to the boreal zone during the past three decades (1965–95). The parameters of carbon flows and initial conditions of carbon pools were decided based on data obtained in each forest stand. Assumptions for model calculation were: (i) primary production (i.e. litterfall and root turnover rates) increased with increasing CO₂ concentrations in the atmosphere (10% per 40 p.p.m. CO₂); and (ii) temperature increased by 0.6°C per 100 years, but precipitation changed little. The simulation employed a daily time step and used daily air temperature and precipitation observed near each forest stand over an average year during the last decade. The model calculations suggest that the accumulation of total soil carbon increased 8.5–10.4 tC (ton of carbon) ha^–1 in broad-leaved forests from the tropics to the cool-temperate zone during the past three decades, but the amount of soil carbon (3.0–8.4 tC ha^–1) increased much less in needle forests from the subtropical to boreal zones during the same period. There is a linear relationship between the increasing rate of soil carbon stock during the past three decades (1965–95) in forest stands concerned (R_MS, % per 30 years) and annual mean temperature of their soils (T₀,°C), as: R_MS = 0.34T₀ + 4.1. Based on the data of carbon stock in forest soil in each climate zone reported, the global sink of atmospheric CO₂ into forest soil was roughly estimated to be 42 GtC (billion tons of carbon) per 30 years, which was 1.4 GtC year^–1 on average over the past three decades.     

The influence of food plant dispersion on caterpillar searching success

Abstract. 1. Collards (Brassica oleracea L.) grown in clumps were more difficult for unstarved, early instar cabbage white caterpillars (Pieris rapae L.) to find than collards spaced at regular intervals, although total plant densities were identical.
2. Early instar, unstarved larvae are less mobile than later instar larvae (our data) or starved larvae (Jones' 1977 data).
3. Starved larvae and late instar larvae tend to find plants more readily than do unstarved or younger larvae.
4. We contend that larval mobility governs the success of searching caterpillars and their sensitivity to variations in plant dispersion.
5. Our results show that the dispersion of targets can influence searching success even though target density is constant. This means that the degree of clumping in host plants is capable of influencing their availability to herbivores.