On organism: environment buffers and their ecological significance

We consider, from a physical perspective, the case where the interface between an organism and its environment becomes large enough that it acts as a buffer regulating their matter and energy exchanges. We illustrate the physiological and evolutionary role of buffers through the example of lungfish estivation. Then we ponder the relevance of buffers of this kind to the quest for a general definition of concepts like niche construction, the extended phenotype, and related ones, whose meaning is conveyed at present mostly through particular examples. Finally, we comment on the potential significance of buffers to organism—environment codetermination in the sense originally suggested by Lewontin.     

Epidemiology and disease-control under gene-for-gene plant-pathogen interaction

An introduction of disease-resistant variety of a crop plant often leads to the development of a virulent race in pathogen species that restores the pathogenicity to the resistant crop. This often makes disease control of crop plants extremely difficult. In this paper, we theoretically explore the optimal 'multiline' control, which makes use of several different resistant varieties, that minimizes the expected degree of crop damages caused by epidemic outbreaks of the pathogen. We examine both single-locus and two-locus gene-for-gene (GFG) systems for the compatibility relationship between host genotypes and pathogen genotypes, in which host haplotype has either susceptible or resistant allele in each resistance locus, and the pathogen haplotype has either avirulent or virulent allele in the corresponding virulence locus. We then study the optimal planting strategy of host resistant genotypes based on standard epidemiological dynamics with pathogen spore stages. The most striking result of our single-locus GFG model is that there exists an intermediate optimum mixing ratio for the susceptible and resistant crops that maximizes the final yield, in spite of the fact that the susceptible crop has no use to fight against either avirulent or virulent race of the pathogen. The intermediate mixture is optimum except when the initial pathogen spore population in the season consists exclusively of the virulent race. The optimal proportion of resistant crops is approximately 1/R(0), where R(0) is the basic reproductive ratio of pathogen--the rest (the vast majority if R(0) is large) of crops should be the susceptible genotype. By mixing susceptible and resistant crops, we can force the pathogen races to compete with each other for their available hosts. This competition between avirulent and virulent races prevents the fatal outbreak of the virulent race (the super-race) that can infect all the host genotypes. In the two-locus GFG control, there again exists the optimal mixing ratio for the fraction of universally susceptible genotype and the total fraction of various resistant genotypes, with the ratio close to 1/R(0).     

锥虫系统发育的研究进展

锥虫(trypanosome)是最早在鱼类血液中发现、随后在几乎所有的脊椎动物血液里都有发现的原生动物寄生虫。它主要通过水蛭和吸血昆虫传播,使宿主受到不同程度的危害。为了较全面地了解锥虫系统发育的研究进展,本文综述了国内外有关锥虫系统发育研究的四个方面的内容锥虫的起源(介绍了锥虫起源于脊椎动物和起源于无脊椎动物的两种不同观点);锥虫的系统发育方式(单系发育);锥虫的进化是否与寄主存在协同性及进化史上分歧时间的差异性;目前研究中存在的问题。     

非传粉小蜂的食性及其对榕树-传粉小蜂系统稳定性的影响

榕树与其传粉小蜂形成了高度专一的互惠共生系统。非传粉小蜂则是该系统的资源掠夺者,但它与该系统共存的机制仍不清楚。于2003年12月-2004年4月在西双版纳以聚果榕（Ficus racemosa L．）为材料,研究了寄生在聚果榕榕果内的5种非传粉小蜂的食性及相互关系,以探讨非传粉小蜂与榕树-传粉小蜂系统共存的机制。结果表明：寄生在聚果榕榕果内的5种非传粉小蜂中,仅Platyneura testacea Motschulsky和Platyneura,mayri Rasplus能刺激子房发育成瘿花,是造瘿者;Apocrypta sp．,Apocrypta westwoodi Grandi和Platyneura agraensis Joseph不能刺激子房发育成瘿花,是拟寄生者。传粉小蜂的拟寄生者和造瘿者对传粉小蜂有负的影响。但在蚂蚁和造瘿者的拟寄生蜂作用下,这种负面影响并不显著,而且它们对榕树繁殖没有显著影响。对小蜂自然种群的分析表明,传粉小蜂处于优势地位。说明在自然情况下传粉小蜂的拟寄生者和造瘿者的种群维持在一个较低水平,对榕树一传粉小蜂系统稳定性影响较小,故能与之长期共存。     

榕树-榕小蜂的物种共形成

榕树-榕小蜂的互惠共生是植物与其传粉者间相互作用的最极端的特例,几乎每一种榕树均由榕小蜂科的一种特定昆虫传粉,而它们的小蜂也只能在此特定榕树种的花内养育它们的幼虫,构成了高度的种专一性(一对一原则).因此榕树及其传粉昆虫间的相互作用被看作是专性互惠共生的最极端特例,也引起人们对它们共趋异及物种形成的诸多推测.对目前榕树一榕小蜂的物种共形成的研究进行了回顾与阐述,希望能对全面认识这对完美的共生伙伴及物种共形成机制提供一些启示.     

An effect of 16S rRNA intercistronic variability on coevolutionary analysis in symbiotic bacteria: molecular phylogeny of Arsenophonus triatominarum

The genes of ribosomal RNA are the most popular and frequently used markers for bacterial phylogeny and reconstruction of insect-symbiont coevolution. In primary symbionts, such as Buchnera and Wigglesworthia, genome economization leads to the establishment of a single copy of these sequences. In phylogenetic studies, they provide sufficient information and yield phylogenetic trees congruent with host evolution. In contrast, other symbiotic lineages (e.g., the genus Arsenophonus) carry a higher number of rRNA copies in their genomes, which may have serious consequences for phylogenetic inference. In this study, we show that in Arsenophonus triatominarum the degree of heterogeneity can affect reconstruction of phylogenetic relationships and mask possible coevolution between the symbiont and its host. Phylogenetic arrangement of individual rRNA copies was used, together with a calculation of their divergence time, to demonstrate that the incongruent 16S rDNA trees and low nucleotide diversity in the secondary symbiont could be reconciled with the coevolutionary scenario.     

Evolution of postmating isolation: comparison of three models based on possible genetic mechanisms

In this study, we simulated the process of the evolution of postmating isolation using three models in which postmating isolation is caused by (1) genetic divergence through collaborative coevolution, (2) genetic divergence through antagonistic coevolution resulting from sexual conflict, and (3) genetic divergence through combinational incompatibility. The collaborative coevolution model and the combinational incompatibility model showed a similar decreasing pattern of hybrid compatibility over generations depending on population size and mutation rates. The antagonistic coevolution model showed that reproductive isolation can evolve rapidly depending on the intensity of selection. In the combinational incompatibility model, the increasing number of loci that interact and result in incompatibility would have both promoting and inhibiting effects on the formation of hybrid incompatibility in the earlier stage of isolation. Mutation rates for genes causing incompatibility significantly affect the number of generations required for postmating isolation, which indicates that models assuming high mutation rates (e.g., μ = 10⁻⁴) might predict much faster evolution for reproductive isolation than those observed in real populations. Received: January 29, 2001 / Accepted: July 4, 2001     

Geographically structured genetic variation in the Medicago lupulina–Ensifer mutualism

Gene flow between genetically differentiated populations can maintain variation in species interactions, especially when population structure is congruent between interacting species. However, large‐scale empirical comparisons of the population structure of interacting species are rare, particularly in positive interspecific interactions (mutualisms). One agriculturally and ecologically important mutualism is the partnership between legume plants and rhizobia. Through characterizing and comparing the population genomic structure of the legume Medicago lupulina and two rhizobial species (Ensifer medicae and E. meliloti), we explored the spatial scale of population differentiation between interacting partners in their introduced range in North America. We found high proportions of E. meliloti in southeastern populations and high proportions of E. medicae in northwestern populations. Medicago lupulina and the Ensifer genus showed similar patterns of spatial genetic structure (isolation by distance). However, we detected no evidence of isolation by distance or population structure within either species of bacteria. Genome‐wide nucleotide diversity within each of the two Ensifer species was low, suggesting limited introduction of strains, founder events, or severe bottlenecks. Our results suggest that there is potential for geographically structured coevolution between M. lupulina and the Ensifer genus, but not between M. lupulina and either Ensifer species.     

Detecting ancient codispersals and host shifts by double dating of host and parasite phylogenies: Application in proctophyllodid feather mites associated with passerine birds

Inferring cophylogeographic events requires matching the timing of these events on both host and symbiont (e.g., parasites) phylogenies because divergences of hosts and their symbionts may not temporally coincide, and host switches may occur. We investigate a large radiation of birds (Passeriformes) and their permanent symbionts, the proctophyllodid feather mites (117 species from 116 bird species; six genes, 11,468 nt aligned) using two time‐calibration strategies for mites: fossils only and host phylogeography only. Out of 10 putative cophylogeographic events 4 agree in timing for both symbiont and host events being synchronous co‐origins or codispersals; three were based on host shifts, but agree in timing being very close to the origin of modern hosts; two disagree; and one large basal mite split was seemingly independent from host phylogeography. Among these events was an ancient (21–25.3 Mya), synchronous codispersal from the Old World leading to the origin and diversifications of New World emberizoid passerids and their mites, the thraupis + quadratus species groups of Proctophyllodes. Our framework offers a more robust detection of host and symbiont cophylogeographic events (as compared to host‐symbiont reconciliation analysis and using host phylogeography for time‐calibration) and provides independent data for testing alternative hypotheses on timing of host diversification and dispersal.     

Parasite transmission among relatives halts Red Queen dynamics

The theory that coevolving hosts and parasites create a fluctuating selective environment for one another (i.e., produce Red Queen dynamics) has deep roots in evolutionary biology; yet empirical evidence for Red Queen dynamics remains scarce. Fluctuating coevolutionary dynamics underpin the Red Queen hypothesis for the evolution of sex, as well as hypotheses explaining the persistence of genetic variation under sexual selection, local parasite adaptation, the evolution of mutation rate, and the evolution of nonrandom mating. Coevolutionary models that exhibit Red Queen dynamics typically assume that hosts and parasites encounter one another randomly. However, if related individuals aggregate into family groups or are clustered spatially, related hosts will be more likely to encounter parasites transmitted by genetically similar individuals. Using a model that incorporates familial parasite transmission, we show that a slight degree of familial parasite transmission is sufficient to halt coevolutionary fluctuations. Our results predict that evidence for Red Queen dynamics, and its evolutionary consequences, are most likely to be found in biological systems in which hosts and parasites mix mainly at random, and are less likely to be found in systems with familial aggregation. This presents a challenge to the Red Queen hypothesis and other hypotheses that depend on coevolutionary cycling.