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1.
Summary Ca2+-activated K+ channels were studied in cultured medullary thick ascending limb (MTAL) cells using the patch-clamp technique in the inside-out configuration. The Ca2+ activation site was modified using N-bromoacetamide (NBA). 1mm NBA in the bath solution, at 2.5 m Ca2+ reduces the open probability,P
o
, of the channel to <0.01, without an effect on single-channel conductance. NBA-modified channels are still Ca2+-sensitive, requiring 25mm Ca2+ to raiseP
o
to 0.2. Both before and after NBA modification channel openings display at least two distributions, indicative of more than one open state. High Ca2+ (1mm) protects the channels from modification. Also presented is a second class of Ca2+-activated K+ channels which are normally present in MTAL cells which open infrequently at 10 m Ca2+ (P
o
=0.01) but have aP
o
of 0.08 at 1mm Ca2+. We can conclude (i) that NBA modifies the channel by shifting Ca2+-sensitivity to very high Ca2+, (ii) that NBA acts on a site involved in Ca2+ gating, and (iii) that a low affinity channel is present in the apical cell membrane with characteristics similar to those of normal channels modified with NBA. 相似文献
2.
Ruchama Hayouka Yael Eisenberg‐Domovich Vesa P. Hytnen Juha A. E. Mtt Henri R. Nordlund Markku S. Kulomaa Meir Wilchek Edward A. Bayer Oded Livnah 《Acta Crystallographica. Section D, Structural Biology》2008,64(3):302-308
The homotetrameric and biotin‐binding properties of avidin and streptavidin have been exploited for a myriad of biotechnological applications and theoretical studies. Among the few differences between the two proteins is the capacity of avidin to hydrolyze biotinyl p‐nitrophenyl ester (BNP), as opposed to streptavidin, which fully protects the same pseudosubstrate from hydrolysis. Combined mutagenesis and X‐ray analysis have been used to attempt to understand this diametric difference in activities. It was found that a charged residue and one of the loops (L3,4) are together responsible for this difference. Recently, the avidin‐related analogue AVR4 was found to have an even more pronounced BNP‐hydrolysis activity than avidin. Again, the combination of charged residue(s) (Asp39 and/or Arg112) and the rigid conformation of the L3,4 loop was suggested to be responsible for the observed hydrolysis reaction. However, replacement of the latter charged residues in AVR4 resulted in only a modest reduction in hydrolytic activity at most, whereas replacement of the L3,4 loop of avidin with the rigid loop of AVR4 caused a dramatic increase in the activity of avidin. These results clearly demonstrate that the main feature responsible for the observed differences in rates of hydrolysis among the avidins is the conformational status of the L3,4 loop, which imposes conformational constraints on the pseudosubstrate, thereby rendering it susceptible to nucleophilic attack by solvent. In this context, the hydrolytic properties of the avidins reflect enzyme catalysis, in that subtleties in substrate binding are the determining features of catalytic efficiency. 相似文献
3.
Spike-timing-dependent synaptic plasticity (STDP) is a simple and effective learning rule for sequence learning. However,
synapses being subject to STDP rules are readily influenced in noisy circumstances because synaptic conductances are modified
by pre- and postsynaptic spikes elicited within a few tens of milliseconds, regardless of whether those spikes convey information
or not. Noisy firing existing everywhere in the brain may induce irrelevant enhancement of synaptic connections through STDP
rules and would result in uncertain memory encoding and obscure memory patterns. We will here show that the LTD windows of
the STDP rules enable robust sequence learning amid background noise in cooperation with a large signal transmission delay
between neurons and a theta rhythm, using a network model of the entorhinal cortex layer II with entorhinal-hippocampal loop
connections. The important element of the present model for robust sequence learning amid background noise is the symmetric
STDP rule having LTD windows on both sides of the LTP window, in addition to the loop connections having a large signal transmission
delay and the theta rhythm pacing activities of stellate cells. Above all, the LTD window in the range of positive spike-timing
is important to prevent influences of noise with the progress of sequence learning. 相似文献
4.
Absorption, linear dichroism and circular dichroism spectra of Rhodopseudomonas capsulata (wild-type-St. Louis strain, mutant Y5 and mutant Ala+) are particularly sensitive to the nature of the light-harvesting bacteriochlorophyll-carotenoid-protein complexes. Evidence for exciton-type interactions is seen near 855 nm in the membranes from the wild-type and from mutant Y5, as well as in an isolated B-800 + 850 light-harvesting complex from mutant Y5. The strong circular dichroism that reflects these interactions is attenuated more than 10-fold in membranes from the Ala+ mutant, which lacks both B-800 + 850 and colored carotenoids and contains only the B-875 light-harvesting complex. These results lead to the conclusion that these two light-harvesting complexes have significantly different chromophore arrangements or local environments. 相似文献
5.
Aims Resource allocation in plants can be strongly affected by competition. Besides plant–plant interactions, terrestrial plants compete with the soil bacterial community over nutrients. Since the bacterial communities cannot synthesize their own energy sources, they are dependent on external carbon sources. Unlike the effect of overall amounts of carbon (added to the soil) on plant performance, the effect of fine scale temporal variation in soil carbon inputs on the bacterial biomass and its cascading effects on plant growth are largely unknown. We hypothesize that continuous carbon supply (small temporal variance) will result in a relatively constant bacterial biomass that will effectively compete with plants for nutrients. On the other hand, carbon pulses (large temporal variance) are expected to cause oscillations in bacterial biomass, enabling plants temporal escape from competition and possibly enabling increased growth. We thus predicted that continuous carbon supply would increase root allocation at the expense of decreased reproductive output. We also expected this effect to be noticeable only when sufficient nutrients were present in the soil.Methods Wheat plants were grown for 64 days in pots containing either sterilized or inoculated soils, with or without slow-release fertilizer, subjected to one of the following six carbon treatments: daily (1.5mg glucose), every other day (3mg glucose), 4 days (6mg glucose), 8 days (12mg glucose), 16 days (24mg glucose) and no carbon control.Important findings Remarkably, carbon pulses (every 2–16 days) led to increased reproductive allocation at the expense of decreased root allocation in plants growing in inoculated soils. Consistent with our prediction, these effects were noticeable only when sufficient nutrients were present in the soil. Furthermore, soil inoculation in plants subjected to low nutrient availability resulted in decreased total plant biomass. We interpret this to mean that when the amount of available nutrients is low, these nutrients are mainly used by the bacterial community. Our results show that temporal variation in soil carbon inputs may play an important role in aboveground–belowground interactions, affecting plant resource allocation. 相似文献
6.
曝氧后,棕色固氮菌(Azotobacter vinelandii)固氮酶钼铁蛋白的催化活性和圆二色信号都显著降低,而吸收光谱则显著增加。与钼、铁、硫化合物和二硫苏糖醇组成的重组溶液保温后,曝氢蛋白的圆二色信号和吸收光谱几乎完全恢复至天然状态的同时,乙炔还原活性也得到了显著的恢复,表明重组溶液可使曝氧蛋白中的 P-cluster和其它活性部位都得到了不同程度的修复。 相似文献
7.
棕色固氮菌固氮酶FeMo蛋白与过量(5-6个当量)的酸性靛蓝保温30-60分钟后,蛋白中的P-金属原子族全部氧化,然而蛋白中的FeMoCo全都处于还原状态。Na2S2O4使这种部分氧化的FeMo蛋白中的P-ciuster重新不,甲基紫精可加快这种还原,而亚甲蓝等氧化剂则使这种蛋白中的FeMoCo受到氧化,对这种部分氧化的FeMo蛋白分别进行CD还原滴定和测定氧化过程中的EPR/ABS的变化已经得到p-Cluster和FeMoCo的氧化还原当量数目。 相似文献
8.
由SDS及梯度胶电泳测得油桐尺蠖核型多角体病毒(BsNPV)多角体蛋白天然状态及亚基分子量分别为363kD与31.5kD,从而推断此蛋白为十二聚体,亚基间无二硫键作用.BsNPV多角体蛋白的远紫外圆二色谱显示,它的二级结构含有31.7%的α螺旋,23.8%的β折叠及44.5%的无规卷曲,与二级结构预测结果相符.通过荧光光谱实验推知,BsNPV多角体蛋白的表面疏水性弱,其色氨酸残基位于蛋白疏水核内部. 相似文献
9.
Alexander M. Andrianov Yuri V. Kornoushenko Ivan V. Anishchenko Vladimir F. Eremin Alexander V. Tuzikov 《Journal of biomolecular structure & dynamics》2013,31(7):665-683
The V3 loop on gp120 from human immunodeficiency virus type 1 (HIV-1) is a focus of many research groups involved in anti-AIDS drug development because this region of the protein is a principal target for neutralizing antibodies and a major determinant for cell tropism and syncytium formation. In this study, the nucleotide sequences of the env gene region coding the V3 loop were determined by DNA sequencing methods for four novel HIV-1 strains that circulate in the countries of Eastern Europe, such as Russia, Belarus, Ukraine, etc. Based on the empirical data obtained, the 3D structures of the V3 loops associated with these viral modifications were generated by computer modeling and then compared to discover similarities in the spatial arrangement of this functionally important site of gp120. Despite the HIV-1 genetic variety, several regions of the V3 loop that contain residues critical for cell tropism were shown to be structurally invariant, which may explain its exceptional role in a co-receptor usage. These data together with those on the biological activity of the V3 individual residues clearly show that these conserved structural motifs of gp120 represent potential HIV-1 weak points most suitable for therapeutic intervention. 相似文献
10.
Porcine S100A12 is a member of the S100 proteins, family of small acidic calcium-binding proteins characterized by the presence of two EF-hand motifs. These proteins are involved in many cellular events such as the regulation of protein phosphorylation, enzymatic activity, protein-protein interaction, Ca2+ homeostasis, inflammatory processes and intermediate filament polymerization. In addition, members of this family bind Zn2+ or Ca2+ with cooperative effect on binding. In this study, the gene sequence encoding porcine S100A12 was obtained by the synthetic gene approach using E. coli codon bias. Additionally, we report a thermodynamic study of the recombinant S100A12 using circular dichroism, fluorescence and isothermal titration calorimetry. The results of urea and temperature induced unfolding and refolding processes indicated a reversible two-state process. Also, the ANS fluorescence studies showed that in presence of divalent ions the protein exposes hydrophobic sites which could facilitate the interaction with other proteins and trigger the physiological responses. 相似文献