Misidentifications in citizen science bias the phenological estimates of two hard-to-identify Elaenia flycatchers

Citizen science initiatives contain a large volume of observations that can be useful to address ecological questions for a wide array of organisms. However, one limitation of citizen science data is the potential for species misidentification. Although recent studies have shown that citizen science data are relatively accurate for many taxa, the effect of misidentification errors in hard-to-identify species remains poorly explored. If misidentification events occur at large scales, ecological estimates can be compromised. Here, we show that misidentifications contained in citizen science databases biased phenological estimates in a pair of migratory and partially overlapping Neotropical flycatchers: the Chilean Elaenia Elaenia chilensis and the Small-billed Elaenia Elaenia parvirostris. We reviewed and re-classified 4399 photos of these species from Argentina, Chile and Uruguay. We found that overall identification accuracy was high (c. 90%) for both species when they were allopatric, but dramatically low for Small-billed Elaenia during autumn migration (from 28.6% to 84.6%) because migrating individuals of Chilean Elaenia were systematically reported as Small-billed. The phenological estimates for both Elaenias were biased due to the large number of misidentifications concentrated towards the autumn migration period. These errors caused a 1-week advancement in the estimated arrival, and a 2-week delay in the estimated departure for Small-billed Elaenia. For Chilean Elaenia, errors caused a 1-week delay for the estimated spring peak passage and underestimation of the magnitude of the autumn passage. Our results highlight the importance of performing critical assessments of records when using citizen science databases to describe ecological patterns in species that are hard to identify. The large volume of information provided by citizen science initiatives is useful to describe spatio-temporal patterns in birds, particularly in those of poorly known regions. However, to further enhance the usefulness of such databases, it is imperative actively to post-process and contrast patterns derived from documented (and undocumented) records, with a special focus on misidentifications. This will only be possible through a thorough review of the documented data, together with an intimate understanding of the natural history of the study species.     

Phylogeography of Plectostylus Beck, 1837 (Gastropoda: Stylommatophora: Orthalicoidea): Origin and isolation of the Fray Jorge forest relicts in northern Chile

Among the questions surrounding the biogeographical history of the Chilean biota, none has gathered more interest than the origin of the Fray Jorge (FJ) forest relict and its biota. Inserted in a semi‐desert area, this forest enclave exists due to the existence of a very particular microclimate in this region. The age of the disjunction and the historical relationship between the FJ biota with the remaining components of South America are explained by two distinct, competing hypotheses: the first suggests that it would have become isolated during the climatic changes of the Paleogene/Neogene, while the second suggests that the isolation is a product of Quaternary glaciations. To discriminate between these competing hypotheses, we used DNA sequence phylogeny methods and molecular genetic dating to the study of a genus of land snails (Plectostylus) that occurs in the FJ relict and throughout Chile. The phylogeny shows a clear distinction between forest and arid clades, and each of these clades is formed by many geographically circumscribed populations. The FJ fragment snails form a clade that is sister to all other forest clades. The separation between the Fray Jorge clade and the other forest clades dates back to the Paleogene/Neogene. Our data suggest that the FJ forest is a relict from the forests that occupied that landscape during the Paleogene/Neogene and retreated due to the aridification of the region. We also observe that the current taxonomy of the Plectostylus genus must be re‐evaluated.     

Mass loss and nutrient release from decomposing evergreen and deciduous Nothofagus litters from the Chilean Andes

Abstract Leaf litter decomposition experiments were conducted on two deciduous (Nothofagus obliqua (roble)) and Nothofagus pumilio (lenga)) and one evergreen (Nothofagus dombeyi) Nothofagus (Nothofagaceae) species from a single Chilean forest in order to understand how congeneric trees with differing leaf lifespans impact the soil in which they grow. Single‐species litter samples were decomposed in a mixed hardwood forest in Ohio and in a deciduous‐evergreen Nothofagus forest in Chile. In the Ohio forest, the two deciduous species’ litters decomposed at k ≈ 1.00 per year and the evergreen at k ≈ 0.75 per year. In Chile k ranged from k ≈ 0.06 (N. obliqua) to k ≈ 0.23 (N. pumilio) per year. In both experiments, N and P were released faster from the deciduous litters than from evergreen litter. In Ohio, evergreen litter immobilized more N and P for a longer time period than did deciduous litter. As N. dombeyi stands tend to have lower available soil N and P in this particular mixed Nothofagus forest, the increased time of N and P immobilization by N. dombeyi litter suggests a feedback role of the tree itself in perpetuating low N and P soil conditions.     

Botanical origin and geographic differentiation of bee-pollen produced in high mountains from the Colombian eastern Andes

In the high mountains of the Colombian Eastern Cordillera (~2000–3000 m above sea level), at the Altiplano Cundiboyacense region and surroundings, beekeepers have specialised in pollen production with substantial harvests all year round. Despite this productive advantage, the knowledge about plants used by honeybees as pollen resources is still limited. Hence, the aim of this work was to identify the botanical origin of bee pollen from this region and to examine differences between five distinguished sub-regions: Sabana de Bogotá, Fúquene, Márquez, Tundama and Norte-Gutiérrez. By means of palynological analyses of 86 pollen samples produced between 2008 and 2010, we found a total amount of 126 pollen types, most of them belonging to the families Asteraceae and Fabaceae. Major pollen types correspond to the exotic taxa Hypochaeris radicata, Brassicaceae, Eucalyptus globulus, Trifolium repens, Trifolium pratense and the native taxa Quercus humboldtii and Weinmannia sp. Differences between sample groups from the five sub-regions were mainly associated to variations in pollen abundance and frequency of native plant species. This result highlights the potential for commercialising bee-pollen from the Colombian Eastern Cordillera with geographical origin differentiation, as well as the importance for beekeeping in promoting the conservation of the natural ecosystems from the region.     

Hydrological connectivity drives longitudinal movement of endangered endemic Chilean darter Percilia irwini (Eigenmann, 1927)

Movement is a fundamental aspect of fish ecology, and it therefore represents an important trait to monitor for the management and conservation of fish populations. This is especially true for small benthic fish, as they often inhabit part of the catchment where their movement may be restricted by alterations to river connectivity due to human activity. Still, the movement of these small benthic fish remains poorly understood, partly because of their small size and their cryptic nature. This applies to Percilia irwini, an endangered small darter native to the south-central region of Chile. Its habitat has been affected by the presence of large hydroelectric dams and is currently threatened by the construction of several others. In this study, the authors investigated movement patterns of P. irwini from populations inhabiting different parts of the Biobío catchment, with different levels of connectivity due to natural and/or human-induced features. The authors combined chronological clustering with random forest classification to reconstruct lifelong movements from multi-elemental otolith microchemistry transects. The majority of the movements detected occurred in an undisturbed part of the catchment. These were directional upstream movements occurring between capture sites from the lower and the middle reaches of the river, representing a distance of nearly 30 km, a distance much larger than previously thought. Nonetheless, in the part of the catchment where connectivity was affected by human activity, no such movements were identified. This study shows that connectivity alteration could impede naturally occurring movement and further threaten the resilience of populations of P. irwini. Furthermore, the results presented are used to discuss advantages and disadvantages of microchemistry analysis for studying movement of small benthic fish.     

Partitioning of vocal activity in a Neotropical highland-frog community

Vocal activity was studied in a Colombian highland-frog community, consisting of five frog species belonging to three families with three different reproductive modes, which reproduced simultaneously in the area. We encountered one diurnal and four nocturnal species. Each species had a distinct call structure, and the 24-hour patterns of calling activity differed significantly between all but two species. Interspecific differences in dominant call frequencies corresponded inversely to differences in male snout-vent length. Only one species called in ponds, whereas all other species used terrestrial sites. Among the terrestrial callers there seemed to be interspecific differences in plant use as calling sites. Our results indicate that despite the low number of species, interspecific vocal partitioning is pronounced, and probably important for reliable vocal communication.     

Geomicrobial characterization of gas hydrate-bearing sediments along the mid-Chilean margin

Bacterial diversity in eight sediment cores from the mid-Chilean margin was studied using length heterogeneity (LH)-PCR, and described in relation to in situ geochemical conditions. DNA from the sulfate-methane transition (SMT) of three cores [one containing methane gas; two proximal to a gas hydrate mound (GHM)] was cloned and sequenced. Clones related to uncultured relatives of Desulfosarcina variabilis were found in all clone libraries and dominated one. Desulfosarcina variabilis related clones were similar to phylotypes observed at the SMT in association with anaerobic methane oxidation in the Eel River basin, Cascadia margin and the Gulf of Mexico. The LH-PCR amplicon associated with D. variabilis clones matched the amplicon that dominated most SMT samples, indicating environmental selection for D. variabilis relatives. Clones related to the Verrucomicrobia dominated the library for the methane gas-containing core. Uncultured Treponema relatives dominated the library for the core obtained on the edge of a GHM. Statistical analysis using geochemical data to describe variance in LH-PCR data revealed that stable carbon isotope ratios of dissolved inorganic carbon are the principal structuring factor on SMT communities. These data suggest that D. variabilis relatives are involved in anaerobic oxidation of methane at the SMT in Chilean margin sediments.     

Reproductive biology of the andromonoecious shrub Trevoa quinquenervia (Rhamnaceae)

Various aspects of the reproductive biology of the andromonoecious shrub Trevoa quinquenervia Gill. & Hook, were studied in a population located in central Chile. Flowering extends from mid August to the end of December. The small, white, entomophilous flowers are incompletely protandrous and last c. 5 days. A weak, pleasant odour along with nectar and pollen attracts 17 diurnal insect species, seven of which are probable pollinators: these include Diptera (Syrphidae and Bombyliidae), Hymenoptera (Apidae and Colletidae) and Coleoptera (Melyridae). Besides perfect flowers T. quinquenervia individuals possess c. 10% staminate flowers, which are lighter, seem to be shorter-lived, and show a smaller gynoecium with abnormal ovules. Reproduction is exclusively sexual and apparently xenogamous, with pollen transfer depending on insect vectors. Although flower morphology and individual flower phenology do not fully prevent self-pollination (and geitonogamy can easily take place) the level of autogamy is low. Therefore, some self-incompatibility mechanism seems operative in this species. Fruit set of open-pollinated flowers is 6.6%, and ripe fruits contain on average 0.66 viable seeds. Predispersal (maternal) reproductive success (percent ovules becoming viable seeds) is 1.45%. For medium to full-sized individuals this corresponds to c. 2600 to 8600 potential offspring per year. Beyond the production of male flowers, four other aspects of the species' reproductive biology seem directed to enhance pollen export, partly implying increased male allocation: (a) a high pollen:ovule ratio, (b) protection of anthers against pollen-robbing by means of the cucullate petals, (c) secondary pollen presentation in a hairy barrier located above the nectary, and (d) a reduction in female allocation achieved by the regular abortion of two out of the three ovules in each ovary, thus producing a mostly one-seeded fruit provided with a thin, energy-poor pericarp. It is proposed that the advantages of enhanced pollen flow for a self-incompatible organism, which is moreover structured in isolated populations, might explain the increased male effort, including the joint evolution of andromonoecy and one-seededness.     

Molecular and cultural characterization of Morchella spp. from disturbed environments of central-southern Chile

In Northwestern Patagonia (Chile), three species of Morchella from undisturbed environments have been identified to date: Morchella tridentina, Morchella andinensis and Morchella aysenina, all belonging to the Elata clade and associated mainly with Nothofagus forests. In this study, the search for Morchella specimens was extended to disturbed environments in Central-Southern Chile, to further explore Morchella species diversity in the country, which is still very limited. The Morchella specimens were identified through multilocus sequences analysis, and the mycelial cultures were characterized, establishing comparisons with specimens from undisturbed environments. To the best of our knowledge, these results reveal for the first time in Chile the presence of the species Morchella eximia and Morchella importuna, and in the case of the last one also the first record in South America. These species were found associated almost exclusively with harvested or burned coniferous plantations. The in vitro mycelial characterization revealed certain inter- and intra-specific patterns of the morphology, such as pigmentation, mycelium type, and development and formation of sclerotia, which varied according to growth media and incubation temperature. The growth rates (mm/day) and mycelial biomass (mg) were significantly influenced by the temperature (p < 0.05), with maximum rates (>10 mm/day) and biomass (approx. 20 mg) between 20 and 24 °C, while a significant growth reduction (70–90%) was observed at 28 °C, mainly in the species from undisturbed environments. Potato-dextrose (PDA) medium stimulated the greatest mycelial density and sclerotia formation in most of the isolates, mainly in M. eximia (UDEC-LAF 236 isolate) which recorded the best mycelial growth performance. Among isolates, UDEC-LAF 236 also showed the best performance in sclerotia production (>350 sclerotia/dish) in 10 days of growth. This study contributes to the knowledge of the diversity of Morchella species in Chile by broadening the species range to those from disturbed environments. It also provides molecular and morphological characterization of the in vitro cultures of different Morchella species. The report on M. eximia and M. importuna, species known as cultivable, adapted to local climatic and edaphic conditions could represent the first step to developing artificial Morchella cultivation methods in Chile.