Isolation and characterization of eight microsatellite loci for the vulnerable Hainan Eld’s deer (<Emphasis Type="Italic">Cervus eldi hainanus</Emphasis>) in China

We report on the isolation and characterization of eight microsatellite markers in the Hainan Eld’s deer (Cervus eldi hainanus) from genomic DNA-enriched libraries. Thirty-three microsatellites were screened from the libraries, and 8 of the screened microsatellites were polymorphic. The number of observed alleles for each locus in 47 individuals ranged from 2 to 9, and the expected and observed heterozygosity was 0.141–0.792 and 0.128–0.957, respectively. Three loci (CEH-2, CEH-6 and CEH-8) of eight deviated from Hardy-Weinberg expectation and no significant linkage association was found among all these loci. These microsatellite markers provide useful tool for population genetic studies of the Eld’s deer.     

Age-specific feeding cessation in male red deer during rut

Tactics for resource-use involve both using stored reserves (capital breeding) and feeding while reproducing (income breeding). In polygynous ungulates, males often use an income breeding strategy when young and shift to a capital breeding tactic at prime age. Little is known regarding why prime-aged males stop or largely reduce eating during rut but still remain inactive for as much time as before rut. A detailed exploration of how rumen content correlates with age and date may shed light on the ultimate causes of why some males stop eating. We provide quantitative empirical data on rumen content from red deer Cervus elaphus during the rutting season in Norway. In male red deer, rumen content declined with age, up to around 6 years of age. Above this age, rumen content was low and stable. A time-of-year effect on rumen content was best described with a second-order polynomial term, as rumen fill was lowest during mid-October when the mass loss of males and the ovulation rate of females both peak. We present two new hypotheses related to why males reduce eating ( physical rest and parasite hypotheses). Two related patterns need to be explained and better documented: (1) why are resting times stable before, after and during rut, and (2) why do non-prime-aged males eat more between rutting activities?     

Phylogeography and founder effect of the endangered Corsican red deer (<Emphasis Type="Italic">Cervus elaphus corsicanus</Emphasis>)

Red deer (n = 149) from eight geographical locations, including the endangered endemic populations from the Tyrrhenian islands (Sardinia and Corsica), were analysed at eight polymorphic microsatellite loci. Two questions were addressed: (1) Is there a founder effect in the Corsican population, which was reintroduced to the island using Sardinian deer after the species’ extinction on Corsica? (2) What is the origin of the Tyrrhenian or Corsican red deer (Cervus elaphus corsicanus)? Our results showed signs of a founder effect for the red deer on Corsica in that these deer showed differentiation from the Sardinian population as measured by F_ST values, assignment tests (with and without a priori definition of populations) and individual-based dendrograms. Genetic variability, however, did not differ significantly between the two populations. With respect to the phylogeography of C. e. corsicanus we found that both deer from North-Africa and Mesola on the Italian mainland were genetically close to the Corsican red deer, but phylogenetic trees based on genetic distances were only poorly supported statistically. Among all populations studied the Mesola red deer showed the lowest distance values from Corsican red deer and yielded allele frequencies that were more similar to those of C. e. corsicanus than were those of North-African red deer. These results are in line with recent palaeontological and archaeozoological findings which suggest that the Corsican red deer is derived from small Italian red deer introduced from the mainland to Sardinia and Corsica during the Late Neolithic and just before the beginning of Classical Antiquity, respectively. They also suggest a possible recent introduction of Tyrrhenian red deer to North-Africa (rather than the other way around), thus accounting for the close genetic relationship (especially based on mitochondrial DNA) that has repeatedly been found between C. e. corsicanus and C. e. barbarus.     

Landscape features affect gene flow of Scottish Highland red deer (Cervus elaphus)

Landscape features have been shown to strongly influence dispersal and, consequently, the genetic population structure of organisms. Studies quantifying the effect of landscape features on gene flow of large mammals with high dispersal capabilities are rare and have mainly been focused at large geographical scales. In this study, we assessed the influence of several natural and human-made landscape features on red deer gene flow in the Scottish Highlands by analysing 695 individuals for 21 microsatellite markers. Despite the relatively small scale of the study area (115 × 87 km), significant population structure was found using F -statistics ( F _ST = 0.019) and the program structure , with major differentiation found between populations sampled on either side of the main geographical barrier (the Great Glen). To assess the effect of landscape features on red deer population structure, the ArcMap GIS was used to create cost-distance matrices for moving between populations, using a range of cost values for each of the landscape features under consideration. Landscape features were shown to significantly affect red deer gene flow as they explained a greater proportion of the genetic variation than the geographical distance between populations. Sea lochs were found to be the most important red deer gene flow barriers in our study area, followed by mountain slopes, roads and forests. Inland lochs and rivers were identified as landscape features that might facilitate gene flow of red deer. Additionally, we explored the effect of choosing arbitrary cell cost values to construct least cost-distance matrices and described a method for improving the selection of cell cost values for a particular landscape feature.     

Fallen leaves and unpalatable plants as alternative foods for sika deer under food limitation

Feeding behavior and rumen contents of sika deer (Cervus nippon Temminck) under food limitation were studied on Nakanoshima Island, Hokkaido. During the phase of population growth, the deer subsisted on tree bark and twigs, deciduous leaves and dwarf bamboos (Sasa spp.) in the winter. After a crash in population, the deer began feeding on the fallen leaves of deciduous trees and continued to do so throughout the year. They also ate unpalatable plants Cephalotaxus harringtonia var. nana Rehd., Senecio cannabifolius Less. and Cynanchum caudatum Maxim. as winter foods, which used to remain untouched by deer, and had accordingly expanded their distributions, following a decrease in the amount of dwarf bamboos available. These facts suggest that sika deer drastically shift their foods and exploit alternative foods under conditions of food limitation.     

Effects of deer,mice and dwarf bamboo on the emergence,survival and growth of <Emphasis Type="Italic">Abies homolepis</Emphasis> (Piceaceae) seedlings

In the subalpine mixed forest of Mt. Ôdaigahara, mid-western Japan, the understory is dominated by dwarf bamboo (Sasa nipponica), which is the major forage of overly populous sika deer (Cervus nippon). In the present study, we monitored the survival and growth of Abies homolepis seedlings over 5years to determine how they responded to the experimental removal of dwarf bamboo and to the exclusion of sika deer and mice (Apodemus argenteus and A.speciosus). Deer and dwarf bamboo reduced the survival of seedlings but had different effects on growth. The stems of seedlings were shorter in the presence of deer, indicating that taller seedlings were apt to be browsed by deer, whereas the diameters of seedlings were smaller in the presence of dwarf bamboo, mainly owing to its shading effect. The presence of mice decreased the number of seedlings germinating in a particular site, but had no effect on seedling survival after germination. There was no significant indirect effect whereby the survival of seedlings was predicted to be facilitated by the decreased biomass of bamboo because of grazing by deer. We supposed that this might be because the direct negative effect of deer was so large as to conceal the positive indirect effect.     

Pedicle and antler fusion and double-head formation in a sika stag (<Emphasis Type="Italic">Cervus nippon</Emphasis>)

A case of pedicle and antler abnormality in a 12–14 year old sika stag shot in January 2003 in Schleswig-Holstein (Germany) is presented. The abnormality combines fusion of pedicles and antler bases with subsequent double-head formation. Double-heads result from growth of new antler bone without casting of the previous hard antlers. In consequence, two consecutively formed antlers are present in an individual. The stags skull showed a plate-like osseous structure whose broad and slightly elevated central portion was identified as the fused pedicles. The peripheral parts of this osseous plate constituted the second antler growth of the (former) double-head. A cast pair of antlers, which were fused at their bases, had been found in a neighbouring hunting district in the summer of 2002. The close fit between the casting surface of the fused antlers and the surface of the pedicle/antler structure on the stags skull indicated that the antlers had been grown by this stag and were belatedly cast from his fused pedicles. The fused antlers thus constituted the first antler growth of the double-head. We suppose that the broad connection between the fused antlers and the fused pedicles prevented antler casting at the normal time and thereby caused the double-head condition. The presentation of this antler abnormality is taken as an occasion to discuss the significance of pedicles for the normal casting and regeneration of antlers.     

Population density and group composition of Japanese sika deer (<Emphasis Type="Italic">Cervus nippon yakushimae</Emphasis>) in an evergreen broad-leaved forest in Yakushima,southern Japan

The population density of Japanese sika deer (Cervus nippon yakushimae Kuroda and Okada) in an evergreen broad-leaved forest in Yakushima, southern Japan, was surveyed over 4years from 1998 to 2001. Two approximately 50ha study sites, Hanyama and Kawahara, were established with a total of 4km of census trails at each site. The estimated densities of sika deer at the two sites were 43–70 deerkm^–2 at Hanyama and 63–78 deerkm^–2 at Kawahara, although these values might be underestimates. The adult sex ratio (number of adult males:number of adult females) ranged from 0.6 to 1.0 at Hanyama, and from 0.4 to 0.9 at Kawahara. Mean group size was 1.9 deer (male group, 1.5 deer; female group, 1.6 deer; mixed group, 3.6 deer). The population density of sika deer was relatively high compared to other sites in Japan, with the exception of very small (<10km²) islands. Possible explanations for this naturally high density of sika deer in an evergreen broad-leaved forest in Yakushima are discussed.     

A hierarchical Bayesian approach for handling missing classification data

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