Construction of IAA-Deficient Mutants of Pseudomonas moraviensis and Their Comparative Effects with Wild Type Strains as Bio-inoculant on Wheat in Saline Sodic Soil

Tryptophan role in microbial biosynthesis of Indole Acetic Acid (IAA) is very distinct. In present study IAA producing bacteria Pseudomonas moraviensis was applied on wheat for improving growth and physiology; in the presence or absence of L-tryptophan in saline sodic field. Aqueous solution of tryptophan was added to the rhizosphere soil at 10?mg L^?1 with irrigated water. The survival efficiency of P. moraviensis measured in the presence of NaCl and mixture of salts. P. moraviensis increased P, NO₃–N and K contents in soil by 18–35% and further 12–15% increase was recorded in the presence of tryptophan. There were 40–80% increases in indole acetic acid (IAA), abscisic acid (ABA) and gibberellic acid (GA) contents of rhizosphere soil, and 40–45% increase in leaves when tryptophan was added with P. moraviensis. In the second phase, IAA deficient mutants of P. moraviensis were constructed and tested for the conversion of tryptophan to IAA. In transposon mutagenesis, 1800 trans-conjugants were generated and tested for tryptophan conversion. Among these, 11 mutants were selected and inoculated into wheat to compare their growth responses to the wild type. P. moraviensis wild type served as PGPR under salinity, but IAA- deficient mutants of P. moraviensis were unable to produce IAA and halted plant growth.     

Azide resistant mutants of Acetobacter diazotrophicus and Azospirillum brasilense increase yield and nitrogen content of cotton

Abstract

Evolution of symbiotic plant-microbe interactions has provided mankind a powerful and environment-friendly means to increase yield of agricultural crops. Here, we report that some azide resistant mutants of two microbial strains can significantly enhance the productivity of cotton varieties, as an attractive and cheap biological substitute of chemical fertilizers, for improved yield of an important cash crop, without any untoward impacts. Sodium azide resistant mutants were isolated from each strain of Azospirillum brasilense and Acetobacter diazotrophicus on different concentrations of sodium azide ranging from 5–60µg/ml. These azide resistant mutants were assessed for their performance on cotton (varieties H-117, HD-123) for various parameters. Inoculation of cottonseeds with mutants obtained better results than inoculation with their respective parental strains. Azide resistant mutants, when used as biofertilizers, showed increased plant height, early flowering, more yield, and high biomass and total nitrogen content. They also increased, in cotton genotypes, the indole acetic acid production and ammonia excretion due to high nitrogenase activity.     

Photosensory Perception and Signal Transduction in Higher Plants — Molecular Genetic Analysis

Light plays a crucial role throughout the life cycle of higher plants modulating various aspects of their growth and development, such as seed germination, leaf differentiation, flowering, and senescence. Plants have thus evolved extremely sensitive mechanisms to continually detect the changing ambient light conditions and transduce the information to the gene expression machinery. The elucidation of this complex information sensing and transduction machinery is fundamental to our understanding of the molecular mechanisms involved in light-regulated plant development. The last decade has witnessed an immense upsurge in information in this regard and the mechanism of photosensory perception and phototransduction is turning out to be quite intricate, involving an array of cellular effectors and biochemical messengers. The analysis of photomorphogenic mutants, predominantly of Arabidopsis, has revealed interesting facts, not only about the intricacies of light signaling circuitry, but also about the multiplicity of the photoreceptors and their specialized or overlapping photosensory functions. In addition, these studies have also highlighted, and in some cases even redefined, the role of conventional plant growth regulators in modulating photomorphogenic development. Employing standard recombinant DNA techniques, substantial information has also become available about the regulatory cis-acting DNA sequences that make a gene amenable to light control and the trans-acting protein factors that can potentially interact with these cis-acting sequences on receiving the signal from the upstream transduction components. The information available to date on these emerging trends in photomorphogenesis research has been summarized and critically evaluated in this review.     

Differential Hypocotyl and Root Development of Arabidopsis Auxin-Insensitive Mutants

Arabidopsis , aux1-7, axr1-3 and axr2-1, grown in a natural sandy soil, without sucrose supplementation. The three mutants showed impaired epidermal cell elongation in the hypocotyls of 15-day-old seedlings, with axr2-1 showing the most marked effects. In addition, the roots of axr2-1 elongated faster and presented a more extended meristematic zone than the other genotypes. Unchanged epidermal cell length in the differentiation zone of axr2-1 relative to the wild-type suggested enhancement of cell proliferation. These alterations may have affected the timing and site of emergence of the root hairs, starting later and further from the root tip than in the other genotypes. Similarly to the wild-type, no root hair growth was initiated in axr2-1 drought-induced short roots, although the epidermis was differentiated into trichoblasts and atrichoblasts. On rehydration of the short roots, hair formation occurred from trichoblasts prior to epidermal cell elongation. Therefore, auxin-insensitivity in the axr2-1 mutant did not result in alterations of the hair-forming process itself. The differential development of axr2-1 seedlings, relative to the other auxin-insensitive mutants, suggested that the AXR2 gene has a complex, regulatory function in multiple hormone signaling. Received 26 July 2000/ Accepted in revised form 28 February 2001     

Effects of β2–microglobulin mutations on the alpha-1 helical region of H2-Ld

 Beta-2 microglobulin (β₂m)has been shown to have an effect on the structural and functional constraints that facilitate proper class I antigen presentation. To date, no evidence has pinpointed the β₂m-specific amino acids that play an integral role in affecting structure in and around the peptide binding region of class I. To delineate β₂m amino acid positions that affect the alpha-1 helical region, we generated a series of mutant β₂m proteins bearing precise amino acid substitutions. The amino acid positions chosen were based upon previous results which demonstrated that human β₂m association with H2-L^d altered the structure of the alpha-1/alpha-2 super-domain. β₂m mutant proteins were used in β₂m exchange assays with cells expressing H2-L^d. Following exchange, cells were assayed to determine whether mutant β₂m association resulted in structural alteration of class I extracellular domains. The alteration in H2-L^d structure was evidenced by an increase in the binding of an antibody (34-1-2), specific for the alpha-1 helical region of H2-L^d. Results demonstrated that amino acid substitutions in β₂m positions 33 and 53 led to a dramatic increase in the reactivity of the alpha-1 domain-specific antibody 34-1-2. Identifying β₂m amino acid positions that influence the structure of the peptide binding region may allow for a better understanding of cellular immune responses that center upon class I/β₂m expression. Received: 18 December 1997 / Revised: 19 February 1998     

Towards Decoding the Sequence-Based Grammar Governing the Functions of Intrinsically Disordered Protein Regions

A substantial portion of the proteome consists of intrinsically disordered regions (IDRs) that do not fold into well-defined 3D structures yet perform numerous biological functions and are associated with a broad range of diseases. It has been a long-standing enigma how different IDRs successfully execute their specific functions. Further putting a spotlight on IDRs are recent discoveries of functionally relevant biomolecular assemblies, which in some cases form through liquid-liquid phase separation. At the molecular level, the formation of biomolecular assemblies is largely driven by weak, multivalent, but selective IDR-IDR interactions. Emerging experimental and computational studies suggest that the primary amino acid sequences of IDRs encode a variety of their interaction behaviors. In this review, we focus on findings and insights that connect sequence-derived features of IDRs to their conformations, propensities to form biomolecular assemblies, selectivity of interaction partners, functions in the context of physiology and disease, and regulation of function. We also discuss directions of future research to facilitate establishing a comprehensive sequence-function paradigm that will eventually allow prediction of selective interactions and specificity of function mediated by IDRs.     

Gonadal Mosaicism Induced by Chemical Treatment of Sperm in Drosophila melanogaster

Accurate interpretation of forward genetic screens of chromosomes exposed in mature spermatozoa to a mutagenic chemical requires understanding—incomplete to date—of how exposed chromosomes and their replicas proceed through early development stages from the fertilized ovum to establishment of the germline of the treated male’s offspring. We describe a model for early embryonic development and establishment of the germline of Drosophila melanogaster and a model-validating experiment. Our model proposes that, barring repair, DNA strands modified by treatment with alkylating agents are stable and mutagenic. Each replication of an alkylated strand can result in misreplication and a mutant-bearing daughter nucleus. Daughter nuclei thenceforth replicate faithfully and their descendants comprise the embryonic syncytium. Of the 256 nuclei present after the eighth division, several migrate into the polar plasm at the posterior end of the embryo to found the germline. Based upon distribution of descendants of the alkylated strands, the misreplication rate, and the number of nuclei selected as germline progenitors, the frequency of gonadal mosaicism is predictable. Experimentally, we tracked chromosomes 2 and 3 from EMS-treated sperm through a number of generations, to characterize autosomal recessive lethal mutations and infer gonadal genetic content of the sons of treated males. Over 50% of 106 sons bore germlines that were singly, doubly, or triply mosaic for chromosome 2 or chromosome 3. These findings were consistent with our model, assuming a rate of misreplication between 0.65 and 0.80 at each replication of an alkylated strand. Crossing treated males to mismatch-repair-deficient females had no apparent effect on mutation rate.