光合细菌菌落计数培养基的研究

利用正交设计试验法研究了碳源、酵母膏、微量元素、磷酸盐、铁盐、琼脂等6个因子对光合细菌培养计数的影响,确定了各因素的最佳配比:NaHCO31.0g,CH3COONa3.0g,酵母膏2.0g,微量元素0mL/L,K2HPO40.5g,Fe-EDTA0.005g,琼脂8g。该组合加上NH4Cl1.0g,MgCl2·6H2O0.2g,NaCl5.0g,dH2O1000mL,即得出光合细菌菌落计数培养基,称之为R培养基。该培养基对光合细菌的检测具有准确、快速、简便等优点。     

光合细菌固定化及对养殖水净化的研究

采用海藻酸钠进行光合细菌固定化实验,比较了固定化菌和悬浮态菌的生长和生理特性,观察其在载体中的分布,并对其净化养殖水的能力进行初步研究。结果表明,固定化大大提高了光合细菌的生长速率;粒径为3.5mm,菌初始密度为0.12mg干菌泥/L为最佳固定化条件;在生长初期,菌在载体内的分布不均匀,后期趋于一致。在固定化菌净化养殖水的研究中发现,固定化光合细菌对养殖水的净化能力大大优于悬浮态菌。     

乳糖对产木聚糖酶基因工程菌1020的诱导作用及碳氮源优化

研究了国产及进口LB培养基对产嗜热性木聚糖酶基因工程菌1020生长及产酶的影响,并以国产原料为基准,优化了培养基。结果表明,国产的酵母膏及蛋白胨和进口原料相比,缺少某些成分,单纯增加用量不能弥补这种差别;乳糖可以代替昂贵的IPTG起到有效的诱导作用;10g·L-1的乳糖可兼起能源及诱导剂的双重效果,菌的生物量和产酶量达到最佳;发酵8h后补加5g·L-1乳糖,生物量及酶活皆有提高。复合氮源优于单一的无机或有机氮源。优化后的酶活从进口LB培养基的270U～290U提高到1700U～1800U。     

发光酶基因lux AB标记硅酸盐细菌NBT菌株的研究

外源基因标记技术为研究土壤引入细菌的生态行为提供了有效的检测手段,通过选择不同的碳源和降低碳氮比筛选获得0．25％麦芽糖作为碳源的菌体制备培养基,对硅酸盐细菌BT菌株进行紫外诱变和抗生素抗性驯化获得—株抗利福平200μg·ml^-1的NBT-R200菌株,含发光酶基因luxAB的质粒pTR102：：luxAB在辅助质粒pRK2013的帮助下转入该菌株中,从而赋予NBT菌株以发光活性和利福平、卡那霉素、四环素三种抗生素抗性．以对数生长期的菌体制备受体细胞,发现对数生长前期的细胞转移频率最高,可达6．70×10^-5,杂交比例以1：1：1适宜．标记菌株RL85的释钾能力没有丧失且有提高,发光特性稳定,连续转接20次后仍具有发光活性和3种抗生素抗性,适用于根际微生态学研究。     

NMR and homology modeling studies of copper(II)-halocyanin from Natronobacterium pharaonis bacteria

Halocyanin from the haloalkaliphilic archaean Natronobacterium pharaonis is a peripheral membrane type 1 blue copper protein with a single polypeptide chain of 163 amino acid residues. Halocyanin participates as putative electron carrier protein associated to an electron acceptor role for a terminal oxidase and has the lowest redox potential value reported to date for a BCP. NMR studies and homology modeling calculations were performed to evaluate the electronic properties of Cu(II)-halocyanin from Natronobacterium pharaonis. The copper coordination site properties of Cu(II)-halocyanin are discussed. The ¹H NMR spectra, isotropic chemical shifts and relaxation times for halocyanin are compared with those of other BCPs such as azurin, amicyanin, plastocyanin and stellacyanin. The wild-type Cu(II)-halocyanin presents almost the same ¹H NMR spectra in comparison with Cu(II)-plastocyanin as expected from a similar coordination symmetry. However, minor differences were found. In order to get some insight on these differences, a computational model for Cu(II)-halocyanin from N. pharaonis was built. Model is based on sequential homology of halocyanin with two different families of proteins: plastocyanins and pseudoazurins. Homology modeling was performed using two different structural templates and copper ion was added for further refinement of the coordination site. Proposed structure was in good agreement with NMR experimental information and is the first three-dimensional model reported to date of an halocyanin. Small differences were found in the copper coordination site with respect to other BCP with known structure. This work is also an interesting example of expertise-driven homology modeling across different protein families.     

Leaf Symptoms on Plum, Coffee and Citrus and the Relationship with the Extent of Xylem Vessels Colonized by Xylella fastidiosa

Leaf petioles of plum, coffee and sweet orange were examined using scanning electron microscopy (SEM). The presence of Xylella fastidiosa in the samples was confirmed by polymerase chain reaction and gel electrophoresis. The number of vessels colonized by X. fastidiosa was determined by SEM in petiole areas that were transversally sectioned under liquid nitrogen. The percentage of colonized vessels in petioles of coffee was higher than in petioles of plum and citrus whether trees were exhibiting mild symptoms (MS) or severe symptoms (SS). The percentage of vessels colonized varied from 10.9 (MS) to 38.0% (SS), 26 (MS) to 51.6% (SS), and 8 (MS) to 11.8% (SS) for plum, coffee and citrus, respectively, and did not vary by position within the petiole. Severity of symptoms consistently reflected higher proportion of colonized vessels in coffee and plum, but not in citrus.     

Decolorization Screening of Synthetic Dyes by Anaerobic Methanogenic Sludge Using a Batch Decolorization Assay

The nonspecific ability of anaerobic sludge bacteria obtained from cattle dung slurry was investigated for 17 different dyes in a batch assay system using sealed serum vials. Experiments using Reactive Violet 5 (RV 5) showed that sludge bacteria could effectively decolorize solutions having dye concentrations up to 1000 mg l⁻¹ with a decolorization efficiency of above 75% during 48 h of incubation. Headspace gas composition of anaerobic batch systems for varying dye concentration revealed that lower concentrations of RV 5 (upto 500 mg l⁻¹) were found to be stimulatory to the methanogenic activity of sludge bacteria. However at higher dye concentrations, the headspace gas composition was found to be similar to batch assay controls without dye, indicating that dye at higher concentrations was inhibitory to methanogenic bacteria of sludge. The optimum inoculum and incubation temperature for maximum decolorization of RV 5 was found to be 9.0 g l⁻¹(in terms of total solids) and 37°C, respectively. Of sixteen other dyes tested, nine (Reactive Black 5, Reactive Blue 31, Reactive Blue 28, Reactive Red HE8B, Reactive Yellow, Reactive Golden Yellow, Mordant Orange, Novatic Olive R S/D & Navilan Yellow GL) were decolorized with more than 88% efficiency; three (Orange II, Navy Blue HER & Novatic Blue BC S/D) were decolorized with about 50–65% efficiency, whereas other three dyes (Procion Orange H2R, Procion Brilliant Blue HGR & Novatic Blue BC S/D) were decolorized with less than 40% efficiency. Though Ranocid Fast Blue was decolorized with about 92.5% efficiency, this was merely due to sorption, whereas the other dyes were decolorized due to biotransformation.     

Identification of Efficient Denitrifying Bacteria from Tannery Wastewaters in Ethiopia and a Study of the Effects of Chromium III and Sulphide on Their Denitrification Rate

In order to identify potential microorganisms with high denitrifying capacity from tannery wastewaters, 1000 pure cultures of bacterial isolates from Modjo Tannery Pilot and Ethio-tannery wastewater treatment plants (WWTP), in Ethiopia, were investigated. Twenty-eight isolates were selected as efficient denitrifiers. These were Gram-negative rods, oxidase and catalase positive denitrifying organisms. The 28 denitrifying strains were further classified according to their biochemical fingerprints into three different phylogenetic groups (BPT1, BPT2 and BPT3) and seven singles. Isolates B79^T, B11, B12, B15, B28 and B38 belonging to the BPT3 cluster were found to be the most efficient denitrifying bacteria. All phenotypic studies, including cellular fatty acid profiles, showed that the 6 BPT3 isolates were closely related to each other. The 16S rRNA partial sequence analysis of type strain B79^T(CCUG 45880) indicated a sequence similarity of 99% to Brachymonas denitrificans JCM9216 (D14320) in the β-subdivision of proteobacteria. Further studies of the effects of chromium III and sulphide on the six Brachymonas denitrificans strains indicated that denitrification by the isolates were inhibited 50% at concentrations of 54 and 96 mg/l, respectively. The efficient isolates characterized in this study are of great value because of their excellent denitrifying properties and relatively high tolerance to the concentrations of toxic compounds (70 mg chromium/l and 160 mg sulphide/l) prevailing in tannery wastewaters.     

不同培养条件下纤维素分解菌对稻草的分解研究

通过不同培养条件 4株纤维素分解菌对稻草的分解试验 ,发现不同纤维素分解菌对稻草纤维素的分解能力有一定的差异 ,部分菌株混合接种培养的分解率明显高于单独培养的分解率 ,混合培养时分解率受接种顺序影响不明显 ,在 1株分解木质素较强菌株 (侧孢霉 )存在情况下 ,培养前期升高培养温度能提高分解率