Influence of bacterivorous nematodes on the decomposition of cordgrass

The influence of bacterivorous nematodes (Diplolaimelloides meyli, Diplolaimelloides oschei, Diplolaimella dievengatensis, Panagrolaimus paetzoldi) on the decomposition of a macrophyte (Spartina anglica) in an aquatic environment was investigated by using laboratory microcosm experiments. Several earlier studies have shown enhancement of the decomposition process in the presence of nematodes, but nematode species-specific effects were never tested. In this study four bacterivorous nematode species were applied separately to microcosms to investigate such species-specific influences.No stimulation of the decomposition process nor of the microbial community was observed in the presence of the nematodes, both were highest in the absence of nematodes. However, clear differences were found between nematode treatments. P. paetzoldi reached much higher numbers than the other species, causing a decrease in microbial activity, probably due to (over)grazing. Remarkably this low microbial activity did not result in a slow-down of the decomposition process compared to the other nematode treatments, raising the question whether P. paetzoldi might be able to directly assimilate detrital compounds. Other nematode species reached much lower densities, but nevertheless an influence on the decomposition process was observed. However, this experiment does not support the view that bacterivorous nematodes enhance decomposition rate.The experimental results show that in nematode communities the use of functional groups is inadequate for biodiversity studies. The four nematode species used in this study belong to the same functional group, but are clearly not functionally redundant since they all have a different influence on the cordgrass decomposition. This suggests that the relationship between nematode species diversity and ecosystem functioning may be idiosyncratic.     

On being the right size: increased body size is associated with reduced telomere length under natural conditions

Evolution of body size is likely to involve trade-offs between body size, growth rate and longevity. Within species, larger body size is associated with faster growth and ageing, and reduced longevity, but the cellular processes driving these relationships are poorly understood. One mechanism that might play a key role in determining optimal body size is the relationship between body size and telomere dynamics. However, we know little about how telomere length is affected when selection for larger size is imposed in natural populations. We report here on the relationship between structural body size and telomere length in wild house sparrows at the beginning and end of a selection regime for larger parent size that was imposed for 4 years in an isolated population of house sparrows. A negative relationship between fledgling size and telomere length was present at the start of the selection; this was extended when fledgling size increased under the selection regime, demonstrating a persistent covariance between structural size and telomere length. Changes in telomere dynamics, either as a correlated trait or a consequence of larger size, could reduce potential longevity and the consequent trade-offs could thereby play an important role in the evolution of optimal body size.     

Are irrigation and grazing effects transferred,accumulated, or counteracted during plant recruitment?

How do effects from perturbations such as irrigation and grazing that have an impact at one stage of the recruitment process (e.g., seedling) affect performance at later stages (e.g., adult)? Such effects may be transferred to later stages without any further change (transferred effects), reinforced by a similar effect so that their importance increases (accumulative effect), or counteracted at later stages by an opposite effect (counteractive effect). We analysed the predominance of transferred, accumulative, and counteractive effects depending on (1) organization level (community, functional group, and species levels), (2) life cycle stage (seeds, seedlings, and adults), (3) grass/forb functional group (forbs versus grasses), and (4) seed mass (small-seeded species, medium-seeded species, and large-seeded species). The study was conducted in Alcalá de Henares, central Spain. During one annual cycle, we counted the number of readily germinable seeds (3,909 seeds: 2,156 forbs and 1,753 grasses), emerged seedlings (2,126 seedlings: 1,238 forbs and 888 grasses), and surviving seedlings up to reproductive adult status (917 adults: 217 forbs and 700 grasses) of all species (74 species) in a factorial field experiment under three different simulated rainfall and three seasonal sheep grazing regimes in a natural Mediterranean annual plant community composed of forbs (dicotyledonous herbs) and grasses (monocotyledonous herbs). Our main results were: (1) the proportion of transferred and counteractive effects was similar between the three studied organization levels (community, functional group, and species levels); (2) we detected many more counteractive effects in the seedling stage than in the adult stage; (3) we did not find more counteractive effects in forbs versus grasses, but transferred effects were more frequent in grasses; and (4) we found more counteractive effects with decreasing seed mass and more transferred effects with increasing seed mass. Our main conclusions were that the prevalence of counteractive effects reduces the sensitivity of the whole recruitment process and enhances the relative importance of the final stage (adults). The prevalence of transferred effects makes the recruitment process more predictable and more dependent on the early stages (seeds and seedlings).     

Looking for the needle in a downsized haystack: Whole‐exome sequencing unravels genomic signals of climatic adaptation in Douglas‐fir (Pseudotsuga menziesii)

1. Conifers often occur along steep gradients of diverse climates throughout their natural ranges, which is expected to result in spatially varying selection to local climate conditions. However, signals of climatic adaptation can often be confounded, because unraveled clines covary with signals caused by neutral evolutionary processes such as gene flow and genetic drift. Consequently, our understanding of how selection and gene flow have shaped phenotypic and genotypic differentiation in trees is still limited.
2. A 40‐year‐old common garden experiment comprising 16 Douglas‐fir (Pseudotsuga menziesii) provenances from a north‐to‐south gradient of approx. 1,000 km was analyzed, and genomic information was obtained from exome capture, which resulted in an initial genomic dataset of >90,000 single nucleotide polymorphisms. We used a restrictive and conservative filtering approach, which permitted us to include only SNPs and individuals in environmental association analysis (EAA) that were free of potentially confounding effects (LD, relatedness among trees, heterozygosity deficiency, and deviations from Hardy–Weinberg proportions). We used four conceptually different genome scan methods based on F_ST outlier detection and gene–environment association in order to disentangle truly adaptive SNPs from neutral SNPs.
3. We found that a relatively small proportion of the exome showed a truly adaptive signal (0.01%–0.17%) when population substructuring and multiple testing was accounted for. Nevertheless, the unraveled SNP candidates showed significant relationships with climate at provenance origins, which strongly suggests that they have featured adaptation in Douglas‐fir along a climatic gradient. Two SNPs were independently found by three of the employed algorithms, and one of them is in close proximity to an annotated gene involved in circadian clock control and photoperiodism as was similarly found in Populus balsamifera.

Synthesis. We conclude that despite neutral evolutionary processes, phenotypic and genomic signals of adaptation to climate are responsible for differentiation, which in particular explain disparity between the well‐known coastal and interior varieties of Douglas‐fir.     

Simulating trends in crop yield and soil carbon in a long-term experiment—effects of rising CO2, N deposition and improved cultivation

Measurements of crop yield and soil carbon in the Bad Lauchstädt long-term fertiliser experiment were analysed with the FASSET model. The model satisfactorily predicted yield and soil carbon development in four treatments: no fertiliser, mineral fertiliser, farmyard manure and farmyard manure plus mineral fertiliser. However, there was a residual between the observed and simulated yield, which was correlated with year. This could be attributed to an increase in observed yields during the last six decades. Scenario analysis showed that the most probable explanation for this yield increase was the use of new crop varieties and/or pesticides, while the increase in atmospheric CO₂ and changes in local N deposition were of lesser importance. The rise in CO₂ thus only explained 9–37% of the yield increase. The observed and simulated developments in soil carbon were quite different in the four treatments. However, the changes within each treatment for different scenarios were much smaller than the substantial difference between treatments. Thus, it was concluded that the type of nutrient applied was more important than development in CO₂ concentration or N deposition in determining soil carbon.     

Effects of survey methods on burrowing owl behaviors

Monitoring wildlife populations often involves intensive survey efforts to attain reliable estimates of population size. Such efforts can increase disturbance to animals, alter detection, and bias population estimates. Burrowing owls (Athene cunicularia) are declining across western North America, and information on the relative effects of potential survey methods on owl behaviors is needed. We designed a field experiment to compare burrowing owl flight distances, times displaced, and probabilities of being displaced between 4 potential population survey methods (single walking surveyor, single vehicle stop, single vehicle stop with 2 surveyors, and double vehicle stop with 2 surveyors), and an experimental control in the agricultural matrix of Imperial Valley, California. Between 25 April and 1 May 2008, we randomly applied survey methods to 395 adult male owls during daylight hours (0700 hours through 1900 hours). All survey methods increased odds of displacing owls from perches. Survey methods with observers outside the vehicle were 3 times more likely to displace an owl than a single vehicle stop where observers remained inside the vehicle. Owls were displaced farther distances by all survey methods compared to control trials, but distances and time displaced did not differ among survey methods. We recommend that surveys for counting owls during the breeding season in agroecystems like the Imperial Valley where high densities of owls nest primarily along the borders of fields be conducted using single vehicle stops with or without 2 surveyors, depending on conditions for locating owls from roads. © 2011 The Wildlife Society.