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81.
A lumped model for cell growth and secondary metabolite production in an immobilized live cell bioreactor has been developed. This model is applied here to simulate the performance of an immobilized bioreactor under steady-state conditions and under conditions of periodically varying concentration of a growth-limiting substrate. The results of the simulation study were experimentally verified in the case of the production of the antibiotic candicidin by Streptomyces griseus in an immobilized bioreactor with forced periodic operation. The results of the studies suggest that periodically operated immobilized live cell bioreactors can provide a potent alternative for the production of non-growth-associated biochemicals, as compared to free cell fermentations, pulsed fermentations with process cycle regeneration, and nonregenerated bioreactors. This work has demonstrated that by frequent pulsing of the growth limiting nutrient, stable extended production can be obtained at high specific cellular productivities. 相似文献
82.
Responses to selection on genotypic or phenotypic values in the presence of genes with major effects
E. Sehested I. L. Mao 《TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik》1992,85(4):403-406
Summary Average genotypic responses were compared after selection for genotypic values and for phenotypic values on the basis of single-gene models and multigene models in simulated livestock populations. Single-gene models dealt with single gene control of the genetic differences between animals, while multigene models considered a collection of genes with various magnitudes of effects on a trait. In each case, selection lasted through discrete generations until the fixation of the gene frequencies occurred. Generations to reach fixation were used to compare various models, and the two criteria for selection, for their efficiency in selection. Implications of using these models versus using infinitesimal models for selection in practice are presented. 相似文献
83.
Estimates of marker-associated QTL effects in Monte Carlo backcross generations using multiple regression 总被引:1,自引:0,他引:1
J. Moreno-Gonzalez 《TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik》1992,85(4):423-434
Summary The decision of whether or not to use QTLassociated markers in breeding programs needs further information about the magnitude of the additive and dominance effects that can be estimated. The objectives of this paper are (1) to apply some of the Moreno-Gonzalez (1993) genetic models to backcross simulation data generated by the Monte Carlo method, and (2) to get simulation information about the number of testing progenies and mapping density in relation to the magnitude of gene effect estimates. Results of the Monte Carlo study show that the stepwise regression analysis was able to detect relatively small additive and dominance effects when the QTL are independently segregating. When testing selfed families derived from backcross individuals, dominance effects had a larger error standard deviation and were estimated at a lower frequency. Linked QTL require a higher marker mapping density on the genome and a larger number of progenies to detect small genetic effects. Reduction of the environmental error variance by evaluating selfed backcross families in replicate experiments increased the power of the test. Expressions of the number of progenies for detecting significant additive effects were developed for some genetic situations. The ratio of the within-backcross genetic variance to the square of a gene effect estimate is a function of the number of progenies, the heritability of the trait, the marker map density and the portion of the genetic variance explained by the model. Different values (from 0 to 1) assigned to (relative position of the QTL in the marker segment) did not cause a large shift in the residual mean square of the model. 相似文献
84.
Alan G. Fix 《American journal of physical anthropology》1981,55(4):433-442
Hemoglobin E, an allele generally considered to confer malarial resistance in heterozygotes, is found in high frequencies across a wide area of Southeast Asia. Apparently it originated as a single-point mutation which was spread by gene flow. The rate of diffusion of this adaptive allele is studied using four computer simulation models. It is shown that in small populations deterministic equations for gene flow may overestimate rates of diffusion. Other aspects of population structure, however, such as kin-structuring of migrant groups, increase the rate of advance. Finally, population growth coupled with the spread of the allele leads to much more rapid diffusion. These results suggest that population structure can be an important factor affecting the diffusion of advantageous genes. 相似文献
85.
Spatial patterns of the future elongation of cells exist in the early embroyo. In the newt, such a pattern of changers of cell shape contributes to the formation of the neural plate. Regardless of where neural plate. Regardless of where neural plte cells are transplanted, they change shape as prescribed by tge pattern. Embryonic induction has a role in establishing this pattern. 相似文献
86.
87.
Canran Liu 《植被学杂志》2001,12(3):411-416
Abstract. The behaviour of five statistics (extensions of Pielou's, Clark and Evansapos;, Pollard's, Johnson & Zimmer's, and Eberhardt's statistics, which are denoted as Pi, Ce, Po, Jz and Eb respectively) that involve the distance from a random point to its jth nearest neighbour were examined against several alternative patterns (lattice‐based regular, inhomogeneous random, and Poisson cluster patterns) through Monte Carlo simulation to test their powers to detect patterns. The powers of all the five statistics increase as distance order j increases against inhomogeneous random pattern. They decrease for Pi and Ce and increase for Po, Jz, and Eb against regular and Poisson cluster patterns. Po, Jz, and Eb can reach high powers with the third or higher order distances in most cases. However, Po is recommended because no extra information is needed, it can reach a high power with the second or third distance even though the sample size is not large in most cases, and the test can be performed with an approximate χ2 distribution associated with it. When a regular pattern is expected, Jz is recommended because it is more sensitive to lattice‐based regular pattern than Po and Eb, especially for the first distance. However, simulation tests should be used because the speed of convergence of Jz to normal distribution is very slow. 相似文献
88.
89.
Bornali Chakrabarti Hridoy R Bairagya Deepak Kr Mishra Pradip Kumar Chatterjee Bishnu P Mukhopadhyay 《Bioinformation》2013,9(3):126-133
Human matrix metalloproteinase-8 (hMMP-8) plays a important role in the progression of colorectal cancer, metastasis, multiple
sclerosis and rheumetoid arthritis. Extensive MD-simulation of the PDB and solvated structures of hMMP-8 has revealed the
presence of few conserved water molecules around the catalytic and structural zinc (ZnC and ZnS) ions. The coordination of two
conserved water molecules (W and WS) to ZnS and the H-bonding interaction of WS to S151 have indicated the plausible involvement
of that metal ion in the catalytic process. Beside this the coupling of ZnC and ZnS metal ions (ZnC – WH (W1)…..W2 ….H162 - ZnS)
through two conserved hydrophilic centers (occupied by water molecules) may also provide some rational on the recognition of
two zinc ions which were separated by ~13 Å in their X-ray structures. This unique recognition of both the Zn+2 ions in the enzyme
through conserved water molecules may be implemented/ exploited for the design of antiproteolytic agent using water mimic
drug design protocol. 相似文献
90.
For the purpose of molecular dynamics simulations of large biopolymers we have developed a new method to accelerate the calculation of long-range pair interactions (e.g. Coulomb interaction). The algorithm introduces distance classes to schedule updates of non-bonding interactions and to avoid unnecessary computations of interactions between particles which are far apart. To minimize the error caused by the updating schedule, the Verlet integration scheme has been modified. The results of the method are compared to those of other approximation schemes as well as to results obtained by numerical integration without approximation. For simulation of a protein with 12 637 atoms our approximation scheme yields a reduction of computer time by a factor of seven. The approximation suggested can be implemented on sequential as well as on parallel computers. We describe an implementation on a (Transputer-based) MIMD machine with a systolic ring architecture. 相似文献