Multi-scale analysis of responses of stream macrobenthos to forestry activities and environmental context

1. Forestry activities can greatly modify the structure and function of invertebrate communities in streams, but the ability to detect effects of forestry may depend on the spatial scale considered, the choice of response metric and the environmental context. In this study, a multi‐scale, multi‐metric approach was used to compare the usefulness of proximate and larger‐scale measurements of forestry activity for understanding the impacts of forestry on stream macrobenthos. 2. Site‐specific responses of macrobenthic communities to forestry activities measured at four spatial scales (sub‐basin and 8‐, 2‐ and 0.5‐km radii upstream of study sites) were examined for 90 riffle sites distributed among 22 tributary streams (Strahler order 1–5) of the Cascapedia River basin, Quebec, Canada. 3. Multiple regression models and canonical correspondence analysis were used to relate six biological metrics (taxonomic richness, numerical density, biomass density, normalised biomass spectrum, individual body mass and community structure) to variables quantifying logging 1–19 years prior to the study and road density. Environmental predictors (variables quantifying local habitat or landscape features) were included in all analyses to statistically account for environmental context and increase the likelihood of detecting potentially subtle forestry impacts. 4. Forestry activities measured at the larger (sub‐basin and 8 km) scales were linked to decline in taxonomic richness, increase in numerical and biomass densities and shift in size structure of benthic macroinvertebrates, indicating that analyses encompassing larger areas, up to the full basin, may allow for more sensitive detection of effects than those of more limited span. 5. These responses primarily reflected marked increases in the abundance of chironomids and decline in the number of trichopteran taxa with increasing areal coverage of recent (≤2–4 years) cuts, suggesting that larger, longer‐lived and possibly more specialised taxa were more vulnerable to forestry impacts than smaller, multivoltine, generalist invertebrates. After partialling out the influence of other variables, rapid decline in richness occurred even when <1% of the basin had been clear cut in the year prior to the study. 6. Effects of forestry were detected after statistically accounting for natural environmental variability, which may have otherwise concealed those effects. The combined use of multiple biological metrics, partialling out of environmental effects and measurement of impacts at multiple spatial scales may be a broadly applicable approach for enhancing sensitivity and facilitating interpretation in studies of anthropogenic effects on macroinvertebrate communities.     

UV‐B INDUCTION OF UV‐B PROTECTION IN ULVA PERTUSA (CHLOROPHYTA)1

The green macroalga Ulva pertusa Kjellman produced UV‐B absorbing compounds with a prominent absorption maximum at 294 nm in response only to UV‐B, and the amounts induced were proportional to the UV‐B doses. Under a 12:12‐h light:dark regime, the production of UV‐absorbing compounds occurred only during the exposure periods with little turnover in the dark. There was significant reduction in growth in parallel with the production of UV‐B absorbing compounds. The polychromatic action spectrum for the induction of UV‐B absorbing compounds in U. pertusa exhibits a major peak at 292 nm with a smaller peak at 311.5 nm. No significant induction was detected above 354.5 nm, and radiation below 285 nm caused significant reduction in the levels of UV‐B absorbing compounds. After UV‐B irradiation at 1.0 W·m^?2 for 9 h, the optimal photosynthetic quantum yield of the samples with UV‐B absorbing compounds slightly increased relative to the initial value, whereas that of thalli lacking the compounds declined to 30%–34% of the initial followed by subsequent recovery in dim light of up to 84%–85% of the initial value. There was a positive and significant relationship between the amount of UV‐B absorbing compounds with antioxidant activity as determined by the α,α‐diphenyl‐β‐picrylhydrazyl scavenging assay. In addition to mat‐forming characteristics and light‐driven photorepair, the existence and antioxidant capacity of UV‐B absorbing compounds may confer U. pertusa a greater selective advantage over other macroalgae, thereby enabling them to thrive in the presence of intense UV‐B radiation.     

基于可见光波段包络线去除的湿地植物叶片叶绿素估算

研究采用芦苇和香蒲叶片光谱及实测叶绿素含量数据,选取波段谱带范围为可见光波段400—760nm(为了避免近红外波段受叶片水分含量的影响,降低构建模型的稳定性),利用相关分析与逐步回归分析的统计学分析方法,建立叶面尺度下不同包络线去除衍生转换光谱:BD(band depth)、CRDR(continuum-removed derivative reflectance)、BDR(band depth ratio)、NBDI(normalized band depth index)与叶绿素含量估算模型。通过对入选波段的统计表明在550—750nm,特别是700—750nm(红边)波段范围内产生了较多的有效波段,是今后进行生物参量反演的重点波段范围。舍一交叉验证结果表明芦苇、香蒲和混合样本绿素含量估测的最佳模型分别为BD、CRDR和NBDI模型,其交叉验证决定系数依次为0.87、0.83和0.81,交叉验证均方根误差RMSE依次为0.16、0.15和0.33。并在此基础上利用独立样本非参数检验和多因子方差分析,探讨相关因素对于叶绿素含量估算模型精度的影响。结果表明物种差异、数据类型差异对于叶绿素回归模型的影响较大,而光谱类型差异及光谱数据与数据类型交互作用对于回归模型精度的影响较小。     

北京植物园不同功能型植物叶经济谱

通过对北京植物园不同功能型植物的叶片光合参数、叶绿素荧光参数、叶面积、叶干质量以及叶氮含量等性状参数进行测定,分析了不同功能型植物的叶经济谱.结果表明: 生活型中草本植物、生活史中一年生植物、光合型中C4植物靠近叶经济谱中快速投资-收益型物种的一端,而生活型中乔木和灌木、生活史中多年生植物、光合型中C3植物位于缓慢投资-收益型物种的一端,表明不同功能型植物通过叶片性状间的权衡采取不同的环境适应策略,验证了不同功能型植物叶经济谱的存在.不同功能型植物叶片性状具有明显差异,其中不同生活型间的叶片比叶面积(SLA)、叶氮含量(N_mass)、最大净光合速率(A_mass)、光合氮利用效率(PNUE)均表现出草本植物>藤本植物>灌木>乔木;不同生活史间一年生植物的SLA、N_mass、A_mass、PNUE均显著高于多年生植物;不同光合型间植物的A_mass、PNUE、PSⅡ实际光化学效率(Φ_PSⅡ)均表现出C4>C3.N_mass、A_mass、SLA两两之间呈显著正相关,而PSⅡ有效光化学量子产量(F_v′/F_m′)与SLA呈显著负相关;PNUE与SLA呈显著正相关.     

Eco‐morphological differentiation in Lake Magadi tilapia,an extremophile cichlid fish living in hot,alkaline and hypersaline lakes in East Africa

Ecological diversification through divergent selection is thought to be a major force during the process of adaptive radiations. However, the large sizes and complexity of most radiations such as those of the cichlids in the African Great Lakes make it impossible to infer the exact evolutionary history of any population divergence event. The genus Alcolapia, a small cichlid lineage endemic to Lakes Magadi and Natron in East Africa, exhibits phenotypes similar to some of those found in cichlids of the radiations of the African Great Lakes. The simplicity within Alcolapia makes it an excellent model system to investigate ecological diversification and speciation. We used an integrated approach including population genomics based on RAD‐seq data, geometric morphometrics and stable isotope analyses to investigate the eco‐morphological diversification of tilapia in Lake Magadi and its satellite lake Little Magadi. Additionally, we reconstructed the demographic history of the species using coalescent simulations based on the joint site frequency spectrum. The population in Little Magadi has a characteristically upturned mouth—possibly an adaptation to feeding on prey from the water surface. Eco‐morphological differences between populations within Lake Magadi are more subtle, but are consistent with known ecological differences between its lagoons such as high concentrations of nitrogen attributable to extensive guano deposits in Rest of Magadi relative to Fish Springs Lagoon. All populations diverged simultaneously only about 1100 generations ago. Differences in levels of gene flow between populations and the effective population sizes have likely resulted in the inferred heterogeneous patterns of genome‐wide differentiation.     

Can pollen match shoes to a previously visited indoor location?

This paper is part of an investigation dedicated to indoor pollen from a forensic point of view. Previous studies documented the ‘natural’ pollen content of a flat and how it was ‘artificially’ altered by ornamental plants. The present study investigated if this ‘artificial pollen trace’ can be transferred to shoes. Brand new sneakers were worn in the flat and afterwards examined for pollen on their soles. The results showed that the shoes gathered pollen and that some pollen types correlated to those found in the flat. Afterwards, some of these shoes were worn while walking through the city for approximately 1.8 km. On these shoes, flat pollen was also detectable, but in low abundances. This study shows that, from a palynological point of view, shoes are worth a look at when a crime is investigated. Uncommon pollen grains on shoes can point to an indoor location with the corresponding ornamental plants.     

DNA自动测序技术进展

Ｄ Ｎ Ａ 测序是遗传工程的重要技术之一, Ｄ Ｎ Ａ 测序技术的自动化对遗传工程的研究具有重要意义。七十年代末期, Ｓａｎｇｅｒ 和 Ｍａｘａｍ 、 Ｇｉｌｂｅｒｔ分别提出了切实可行的 Ｄ Ｎ Ａ序列测定方法。近二十年来, Ｄ Ｎ Ａ 测序技术发展很快。人们从不同方面对该技术进行了改进,并将许多先进的光学探测方法应用于 Ｄ Ｎ Ａ 测序技术中。目前已出现了许多商品化的 Ｄ Ｎ Ａ 测序仪。     

Isolation and Characterization of Photosystem Ⅱ Reaction Center D1-D2-Cytochrome b-559 Complex from the Chloroplasts of Spinach

Photosystem Ⅱ reaction center D1-D2-cytochrome b-559 pigment-protein complex has been isolated and purified from chloroplasts of spinach and its properties have been studied. The Isotared photosystem II reaction center contains close to six chlorophyll a per two pheophytin a molecules. Analysis of fluorescence decaying by phase modulation fluorometry suggests that the reaction center has three components of fluorescence decaying with lifetimes of 1.5 nS, 6.23 nS, 36.26 nS in terms of fractions to total fluorescence yield as 0.06, 0.67, 0.27 respectively. The ,6.25 nS fluorescence component corresponds to chlorophyll a which is energetically uncoupled from the process of charge separation. The proportion of 1.51 nS component is very low, and its source is unclear. The 36.25 nS fluorescence component is attributed to the recombination of the primary radical pair, and so represents the activity of charge separation.