The metastasis-promoting protein S100A4 regulates mammary branching morphogenesis

High levels of the S100 calcium binding protein S100A4 also called fibroblast specific protein 1 (FSP1) have been established as an inducer of metastasis and indicator of poor prognosis in breast cancer. The mechanism by which S100A4 leads to increased cancer aggressiveness has yet to be established; moreover, the function of this protein in normal mammary gland biology has not been investigated. To address the role of S100A4 in normal mammary gland, its spatial and temporal expression patterns and possible function in branching morphogenesis were investigated. We show that the protein is expressed mainly in cells of the stromal compartment of adult humans, and during active ductal development, in pregnancy and in involution of mouse mammary gland. In 3D culture models, topical addition of S100A4 induced a significant increase in the TGFα mediated branching phenotype and a concomitant increase in expression of a previously identified branching morphogen, metalloproteinase-3 (MMP-3). These events were found to be dependent on MEK activation. Downregulation of S100A4 using shRNA significantly reduced TGFα induced branching and altered E-cadherin localization. These findings provide evidence that S100A4 is developmentally regulated and that it plays a functional role in mammary gland development, in concert with TGFα by activating MMP-3, and increasing invasion into the fat pad during branching. We suggest that S100A4-mediated effects during branching morphogenesis provide a plausible mechanism for how it may function in breast cancer progression.     

PI3K/mTOR signaling regulates prostatic branching morphogenesis

Prostatic branching morphogenesis is an intricate event requiring precise temporal and spatial integration of numerous hormonal and growth factor-regulated inputs, yet relatively little is known about the downstream signaling pathways that orchestrate this process. In this study, we use a novel mesenchyme-free embryonic prostate culture system, newly available mTOR inhibitors and a conditional PTEN loss-of-function model to investigate the role of the interconnected PI3K and mTOR signaling pathways in prostatic organogenesis. We demonstrate that PI3K levels and PI3K/mTOR activity are robustly induced by androgen during murine prostatic development and that PI3K/mTOR signaling is necessary for prostatic epithelial bud invasion of surrounding mesenchyme. To elucidate the cellular mechanism by which PI3K/mTOR signaling regulates prostatic branching, we show that PI3K/mTOR inhibition does not significantly alter epithelial proliferation or apoptosis, but rather decreases the efficiency and speed with which the developing prostatic epithelial cells migrate. Using mTOR kinase inhibitors to tease out the independent effects of mTOR signaling downstream of PI3K, we find that simultaneous inhibition of mTORC1 and mTORC2 activity attenuates prostatic branching and is sufficient to phenocopy combined PI3K/mTOR inhibition. Surprisingly, however, mTORC1 inhibition alone has the reverse effect, increasing the number and length of prostatic branches. Finally, simultaneous activation of PI3K and downstream mTORC1/C2 via epithelial PTEN loss-of-function also results in decreased budding reversible by mTORC1 inhibition, suggesting that the effect of mTORC1 on branching is not primarily mediated by negative feedback on PI3K/mTORC2 signaling. Taken together, our data point to an important role for PI3K/mTOR signaling in prostatic epithelial invasion and migration and implicates the balance of PI3K and downstream mTORC1/C2 activity as a critical regulator of prostatic epithelial morphogenesis.     

Growth factor-dependent branching of the ureteric bud is modulated by selective 6-O sulfation of heparan sulfate

Heparan sulfate proteoglycans (HSPGs) are found in the basement membrane and at the cell-surface where they modulate the binding and activity of a variety of growth factors and other molecules. Most of the functions of HSPGs are mediated by the variable sulfated glycosaminoglycan (GAG) chains attached to a core protein. Sulfation of the GAG chain is key as evidenced by the renal agenesis phenotype in mice deficient in the HS biosynthetic enzyme, heparan sulfate 2-O sulfotransferase (Hs2st; an enzyme which catalyzes the 2-O-sulfation of uronic acids in heparan sulfate). We have recently demonstrated that this phenotype is likely due to a defect in induction of the metanephric mesenchyme (MM), which along with the ureteric bud (UB), is responsible for the mutually inductive interactions in the developing kidney (Shah et al., 2010). Here, we sought to elucidate the role of variable HS sulfation in UB branching morphogenesis, particularly the role of 6-O sulfation. Endogenous HS was localized along the length of the UB suggesting a role in limiting growth factors and other molecules to specific regions of the UB. Treatment of cultures of whole embryonic kidney with variably desulfated heparin compounds indicated a requirement of 6O-sulfation in the growth and branching of the UB. In support of this notion, branching morphogenesis of the isolated UB was found to be more sensitive to the HS 6-O sulfation modification when compared to the 2-O sulfation modification. In addition, a variety of known UB branching morphogens (i.e., pleiotrophin, heregulin, FGF1 and GDNF) were found to have a higher affinity for 6-O sulfated heparin providing additional support for the notion that this HS modification is important for robust UB branching morphogenesis. Taken together with earlier studies, these findings suggest a general mechanism for spatio-temporal HS regulation of growth factor activity along the branching UB and in the developing MM and support the view that specific growth factor-HSPG interactions establish morphogen gradients and function as developmental switches during the stages of epithelial organogenesis (Shah et al., 2004).     

Growth, senescence and water use efficiency of spring oilseed rape (Brassica napus L. cv. Mozart) grown in a factorial combination of nitrogen supply and elevated CO2

Atmospheric CO₂ enrichment is expected to affect the resource use efficiency of C3 plants with respect to water, nutrients and light in an interactive manner. The responses of oilseed rape (OSR) to elevated CO₂ have not much been addressed. Since the crop has low nitrogen use efficiency, the interactive effects of CO₂ enrichment and nitrogen supply deserve particular attention.Spring OSR was grown in climate chambers simulating the seasonal increments of day length and temperature in South-Western Germany. Three levels of N fertilisation representing 75, 150 and 225 kg ha⁻¹ and two CO₂ concentrations (380 and 550 μmol mol⁻¹) were used to investigate changes in source-sink relationships, plant development and senescence, water use efficiency of the dry matter production (WUE_prod.), allocation patterns to different fractions, growth, yield and seed oil contents. Seven harvests were performed between 72 and 142 days after sowing (DAS).Overall, plant performance in the chambers was comparable to the development under field conditions. While CO₂ responses were small in the plants receiving lowest N-levels, several significant N × CO₂ interactions were observed in the other treatments. Increasing the N availability resulted in longer flowering windows, which were furthermore extended at elevated CO₂ concentrations. Nevertheless, significantly less biomass was allocated to reproductive structures under elevated CO₂, while the vegetative C-storing organs continued to grow. At the final harvest shoot mass of the CO₂ exposed plants had increased by 9, 8 and 15% in the low, medium and high N treatments. Root growth was increased even more by 17, 43 and 33%, respectively and WUE_prod. increased by 23, 42 and 35%. At the same time, seed oil contents were significantly reduced by CO₂ enrichment in the treatments with ample N supply.Obviously, under high N-supply, the CO₂ fertilisation induced exaggerated growth of vegetative tissues at the expense of reproductive structures. The interruption of source-sink relationships stimulated the formation of side shoots and flowers (branching out). While direct effects of elevated CO₂ on flowering can be excluded, we assume that the increased growth under high N and CO₂ supply created nutrient imbalances which hence affected flowering and seed set.Nevertheless, the final seed macronutrient concentrations were slightly increased by elevated CO₂, indicating that remobilisation of nutrients from the sources (leaves) to the sinks (seeds) remained effective. These findings were supported by the lower nitrogen concentrations in senescing leaves and probably increased N remobilisation to other plant parts under elevated concentrations of CO₂. All the same, CO₂ enrichment caused a decline in seed oil contents, which may translate into a reduced crop quality.     

A stochastic model of brain cell differentiation in tissue culture

 The timing of cell differentiation can be controlled both by cell-intrinsic mechanisms and by cell-extrinsic signals. Oligodendrocyte type-2 astrocyte progenitor cells are known to be the precursor cells that give rise to oligodendrocytes. When stimulated to divide by purifed cortical astrocytes or by platelet-derived growth factor, these progenitor cells generate oligodendrocytes in vitro with a timing like that observed in vivo. The most widely accepted model of this process assumes a cell-intrinsic biological clock that resides in the progenitor cell. The intrinsic clock model originally proposed in 1986 remains as the dominant theoretical concept for the analysis of timed differentiation in this cell lineage. However, the results of a recent experimental study (Ibarrola et al., Developmental Biology, vol. 180, 1–21, 1996) are most consistent with the hypothesis that the propensity of a clone of dividing O-2A progenitor cells initially to generate at least one oligodendrocyte may be regulated by cell-intrinsic mechanisms, but that environmental signals regulate the extent of further oligodendrocyte generation. We propose a stochastic model of cell differentiation in culture to accommodate the most recent experimental findings. Our model is an age-dependent branching stochastic process with two types of cells. The model makes it possible to derive analytical expressions for the expected number of progenitor cells and of oligodendrocytes as functions of time. The model parameters were estimated by fitting these functions through data on the average (sample mean) number of both types of cells per colony at different time intervals from start of experiment. Using this method we provide a biologically meaningful interpretation of the observed pattern of oligodendrocyte generation in vitro and its modification in the presence of thyroid hormone. Received: 18 April 1997 / Revised version: 30 November 1997     

Markov invariants and the isotropy subgroup of a quartet tree

The purpose of this article is to show how the isotropy subgroup of leaf permutations on binary trees can be used to systematically identify tree-informative invariants relevant to models of phylogenetic evolution. In the quartet case, we give an explicit construction of the full set of representations and describe their properties. We apply these results directly to Markov invariants, thereby extending previous theoretical results by systematically identifying linear combinations that vanish for a given quartet. We also note that the theory is fully generalizable to arbitrary trees and is equally applicable to the related case of phylogenetic invariants. All results follow from elementary consideration of the representation theory of finite groups.     

Mitochondrial DNA evolution in primates: Transition rate has been extremely low in the lemur

Summary Based on mitochondrial DNA (mt-DNA) sequence data from a wide range of primate species, branching order in the evolution of primates was inferred by the maximum likelihood method of Felsenstein without assuming rate constancy among lineages. Bootstrap probabilities for being the maximum likelihood tree topology among alternatives were estimated without performing a maximum likelihood estimation for each resampled data set. Variation in the evolutionary rate among lineages was examined for the maximum likelihood tree by a method developed by Kishino and Hasegawa. From these analyses it appears that the transition rate of mtDNA evolution in the lemur has been extremely low, only about 1/10 that in other primate lines, whereas the transversion rate does not differ significantly from that of other primates. Furthermore, the transition rate in catarrhines, except the gibbon, is higher than those in the tarsier and in platyrrhines, and the transition rate in the gibbon is lower than those in other catarrhines. Branching dates in primate evolution were estimated by a molecular clock analysis of mtDNA, taking into account the rate of variation among different lines, and the results were compared with those estimated from nuclear DNA. Under the most likely model, where the evolutionary rate of mtDNA has been unifrom within a great apes/human calde, human/chimpanzee clustering is preferred to the alternative branching orders among human, chimpanzee, and gorilla.     

Nuclear behavior during branch formation in a centrifugedAdiantum protonema and the nuclear polarity

A new branch was induced on the side wall of fern protonema by cell centrifugation and subsequent polarized red light irradiation after the induction of cell division under white light. Nuclear behavior during the branch formation was analyzed. Immediately after cell division, the two daughter nuclei moved away from the division site in both red and dark conditions. Under continuous irradiation with polarized red light, cell swelling occurred as an early step of branching near the cell dividing wall, even though the nucleus was localized far from the branching site at the beginning of the swelling. After a new branch started to grow, the nucleus returned to the branching site and moved into the new branch from its basipetal end. When a protonema incubated in the dark was centrifuged again acropetally or basipetally just before the irradiation of polarized red light, the rate of apical growth or branch formation was increased, respectively. Moreover, growth of a branched protonema was altered from its former apex or from the branch again by dislocating the nucleus acropetally or basipetally by centrifugation, respectively. These facts suggest that the nucleus has no polarity physiologically, i.e. head and tail, namely either end of the spindle-shaped nucleus can be the nuclear front in a tip-growing protonema.     

Compensatory branching and changes in nitrogen content in the aquatic weed Salvinia molesta in response to disbudding

Summary Secondary side branching in Salvinia molesta plants grown in nutrient solution was dependent on the availability of nitrogen. The compensatory response of S. molesta to damage by complete manual disbudding was the production of extensive secondary side branching at nitrogen levels below those required for this type of branching in undamaged plants. After 28 days damaged plants had the same number of ramets as undamaged plants but the dry weight was considerably reduced.After 7 days there was no change in dry weight with partial or complete disbudding. However completely disbudded plants had no new ramets and plants with all terminal buds removed had numbers of ramets significantly reduced. The concentration of nitrogen in the tissue of new growth was higher in damaged than undamaged plants. The results are discussed in relation to the biological control of S. molesta by the bud-eating weevil, Cyrtobagous salviniae.     

On a Continuous Branching Process and Birth-Death and Immigration Models for Testing the Efficacy of Some Control Programmes for AIDS

The present communication is an attempt to describe the mode of propagation of AIDS epidemic and its control programme using a branching process as well as a birth-death and immigration model. A comparison of the project of AIDS control programme on the basis of its propagation by a continuous branching process model with that of a linear birth and death process with immigration shows a remarkable contrast. Branching process model shows that it is possible to control the propagation of the disease by suitably increasing the detection rate and lowering the infection rate. However, the propagation of AIDS models by birth and death Process with or without immigration shows that it is increasingly difficult to control the invasion of AIDS merely by controlling the birth, death and immigration parameters.