Using species traits to assess human impacts on near shore benthic ecosystems in the Canadian Arctic

Human activities have the potential to alter the diversity and composition of biological communities in natural environments, which can cause changes in ecosystem functioning. This has led to the development of environmental assessment techniques that take into account species identity, as species can contribute differently to various ecosystem processes. Biological Traits Analysis (BTA) is used to compare the abundances of specific biological traits in samples to produce information about how ecosystem functioning may change across a specific terrestrial or aquatic system. In the present study, BTA was used to assess the influence of municipal wastewater effluent on benthic marine communities in near shore soft sediments in four locations across the Canadian Arctic Territory of Nunavut, Canada. Shifts in trait composition were assessed relative to indicators of sediment enrichment (sediment chlorophyll, organic content, degree of anoxia), and natural variation in habitat characteristics (water depth, porosity, average grain size) at a site receiving wastewater and a reference site in each sampling location. The results indicated a mild enrichment effect of wastewater, as evidenced by changes in trait composition at three of the four sites that received wastewater inputs. However, the amount of variance in trait composition explained by metrics of wastewater enrichment in these locations were generally equal to or lower than the amount of variance explained by sediment characteristics related to natural processes. These results provide greater insight into the underlying causes and consequences of human activities than more traditional methods for environmental impact assessment, and can be directly applied in a management context.     

Stream-dwelling insects and extremely low frequency electromagnetic fields: a ten-year study

Changes in the structure of benthic insect communities at an experimental site and at a reference site in the Ford River, Michigan were monitored over a 10-year period to determine whether extremely low frequency electromagnetic fields (ELF) affected those communities. Five of 10 biotic parameters monitored are presented: taxon evenness (J), richness (S), numerical dominance of chironomids, and total insect mass. Data were separated into three seasons because coefficient of variation values were lower in the summer than in the spring and fall. Two-way ANOVA tests for the biotic variables were often significantly different between sites and among years, but the interaction terms were less frequently significant. Biotic parameters were regressed against stream discharge, water temperatures, years, and ELF cumulative ground field exposures. At the experimental site, discharge accounted for more variation than did water temperature or years for all biotic parameters except chironomid numerical dominance in the fall. Intervention analyses, using the B.A.C.I parametric or the R.I.A non-parametric showed significant differences in three of 15 cases; namely, for the highly varying chironomid numerical dominance values in the spring and fall and for the low varying total insect mass values in the summer. For those tests, the Before Impact period spanned April 1984 through May 1986. The After Impact period (full ELF power) spanned June 1989 through August 1993. Trend analysis for total insect mass at the experimental site in the summer showed discharge to be more important than water temperatures or ELF ground field exposures. Natural physical factors appear to be more important than the anthropogenic ELF fields in accounting for seasonal and yearly changes in the community.     

Caractérisation des peuplements de macroinvertébrés benthiques à l’aide de la carte auto-organisatrice (SOM)

Macrobenthic organisms are much used nowadays as bio-indicators for their ability to reflect different disturbances of aquatic ecosystems. However, they have never been used to assess the ecological status of the lagoons of Benin. The current study aims at revealing the ecological state of the lagoon of Porto-Novo through the study of changes in the settlement of benthic organisms collected in this lagoon. The sampling was carried out from July 2007 to June 2009 on a frequency of four seasons of collection per year. The self-organizing map (SOM) of Kohonen has been used for various patterns of distribution of collected organisms. A discriminant analysis (AFD) has allowed the identification of the parameters that govern the patterns observed in this environment. Four groups of macrobenthic communities emerged that were well predicted (75%). The distribution of benthic macro invertebrates of this lagoon is therefore zonal, seasonal and discriminated by variables of mineralization and sediment grain size. The difference in taxonomic richness corresponds to environmental conditions of stations appearing more or less stable and highlighting a gradient of the stress on organisms. Places with unstable conditions are affected by human activities due to their proximity to homes that are enriched in organic matter. These places are full of polluted-tolerant species such as the Gastropods Potamididae, Cirratulidae Polychaetes, Diptera Chironomidae and Oligochaeta. The macrobenthic fauna, which is well differentiated in the groups, is then subjected to human disturbance.     

Assessment of quality of three marine benthic habitat types in northern Baltic Sea

The European Union Habitats Directive (HD) obliges member states to assess the conservation status of marine habitat types but no explicit methodologies for assessing the quality of habitats have been stated in the directive or accompanying documents. In this study, a system was developed to assess the structure and functioning of three important marine habitat types in the Estonian sea area: sandbanks (HD code 1110), mudflats (1140), and reefs (1170). The assessment system includes a list of ecological criteria and favourable reference values together with procedural rules and field sampling locations. The habitat types listed in the HD are broadly defined and may encompass different communities depending upon distinct environmental gradients. By considering these environmental gradients the habitat types reefs and sandbanks were zoned and the assessment criteria and corresponding favourable reference values were defined separately for each zone. A set of several metrics like benthos indices, community variables, presence of sensitive or typical species, proportions of functional or taxonomic groups were tested as potential criteria for determining habitat quality. The most appropriate criteria were selected for incorporation into the assessment system based on ecological eligibility, suitability to local conditions, occurrence rates of benthic species, responses to disturbances, statistical properties of distribution of measured values, and practical considerations. Extensive benthos database (records from the whole Estonian sea area, 1995–2014) was used to calculate values of criteria to support the selection of criteria and to derive reference values. In order to fully take into account their crucial role in maintaining the structure and functioning of habitats, the criteria on habitat-forming species were assigned higher hierarchical order in the assessment scheme compared to other criteria. Special field works were carried out to assess the status of the three habitat types in 2015. The quality of all three monitored habitats was assessed to be in a favourable status. Additionally, the distributions of the three habitat types were mapped. To date, this is the first study in the Baltic Sea region that formulates HD compliant explicit criteria, reference values, and assessment procedures for several marine habitat types. The main challenges of the study were to derive assessment criteria and favourable reference values that are ecologically relevant and practically feasible.     

Temporal and spatial variability in the cover of deep reef species: Implications for monitoring

Imagery collected from Autonomous Underwater Vehicles (AUVs) provides a novel means of monitoring changes in benthic ecosystems over large spatial scales and depth ranges. However, for many benthic ecosystems there is little baseline data to quantify temporal and spatial variance for key indicator species. This information is crucial for isolating background “noise” from long-term “signals”. Here we quantify components of variance for five key deep-water sessile invertebrate species across four long-term benthic monitoring sites in a region undergoing strong climate-driven changes. We use linear mixed models to estimate the contribution of sources of spatial and temporal variance in species covers from empirical data. We then combine this information with projected long-term climate-driven changes in the cover of these groups and test the power of various survey designs to detect change through time. Large short-term temporal and spatial variability in the cover of a gorgonian octocoral results in high components of variance that limit the detectability of the projected long-term trend for this species. Conversely, for three of the sponge species high power is achievable with revisits to the four original sites every two years until 2060. By including more sites in the revisit design, high power can be achieved with less frequent revisits. For the fifth species, we find high power is unachievable due to the small trend predicted. Overall, we highlight how examination of components of variance in a system can aid in the selection of suitable indicators and the establishment of effective monitoring programs.     

Short-term impacts of polyunsaturated aldehyde-producing diatoms on the harpacticoid copepod, Tisbe holothuriae

Diatoms that produce toxic oxylipins can be detrimental to the reproductive success of aquatic invertebrates. Despite the potential importance of these toxins in shaping aquatic ecosystems, marine studies to date have focused almost exclusively on planktonic calanoid copepods. The current work examines the response of the benthic harpacticoid copepod, Tisbe holothuriae, to direct exposure to diatom-derived oxylipins and the short-term impact of oxylipin-producing diatom diets on reproductive success. The most toxic oxylipin was the polyunsaturated aldehyde (PUA) 2E,4E-decadienal with an LD₅₀ of 9.3 μM for T. holothuriae nauplii. The least tolerant life-stage was the nauplius followed by adult males then adult females. Short-term exposure to PUA-producing diatoms (Skeletonema marinoi and Melosira nummuloides) in maternal diets had no significant impact on reproductive success compared with non-PUA-producing diets (Skeletonema costatum, Navicula hanseni, Phaeodactylum tricornutum and Tetraselmis suecica). The PUA producers had no negative impact on the survival and development of naupliar stages to adulthood. T. holothuriae expresses a higher degree of tolerance to PUA-producing diatoms than many planktonic calanoids, possibly reflecting a degree of adaptation to higher stress levels associated with the benthos. This is the first study to investigate the reproductive responses of harpacticoid copepods feeding on known PUA-producing diatoms.     

Distribution of the invasive New Zealand mudsnail (Potamopyrgus antipodarum) in the Columbia River Estuary and its first recorded occurrence in the diet of juvenile Chinook salmon (Oncorhynchus tshawytscha)

Estuaries play an important role as nurseries and migration corridors for Chinook salmon and other fishes. The invasive New Zealand mudsnail, Potamopyrgus antipodarum (Gray, 1843), has been noted in the Columbia River Estuary and other estuaries in the western USA, yet no studies have addressed the estuarine impacts of this invader. Our data show P. antipodarum is currently found in five peripheral bays and many tributaries of the Columbia River Estuary, where it can constitute a major portion of the benthic invertebrate biomass and where it co-occurs with native amphipod species. We review the history of the P. antipodarum invasion in the Columbia River Estuary and discuss potential impacts on estuarine food webs. We also report the first occurrence of P. antipodarum in the diet of juvenile Chinook salmon from the Columbia River Estuary. Although present in Chinook diets at very low frequencies, our observations of P. antipodarum in Chinook gut contents may represent early stages of food web change due to the establishment of dense estuarine snail populations. Additional research is needed to determine the effects of P. antipodarum on benthic resources, native benthic invertebrates, and benthic predators. We encourage biologists working in western USA estuaries to be alert to the possibility of encountering P. antipodarum in benthic habitats and predator diets.

Comparison of stream benthic invertebrate assemblages among forest types in the temperate region of Japan

We compared benthic invertebrate assemblages among headwater streams in several forest types in Japan. Forests were divided into three clusters based on vegetation composition: old-growth broad-leaved forest, planted coniferous forest, and mixed forest. The numbers of individuals and families and the diversity (Shannon-Wiener) of benthic invertebrate assemblages did not differ significantly among the three forest clusters. However, principal components analysis of family abundance showed differences in the benthic invertebrate assemblages among the three forest clusters. No environmental factors were correlated with these differences. Benthic invertebrate assemblages differed depending on forest composition. The abundances of Taeniopterygidae and Athericidae in old-growth broad-leaved forest were significantly greater than in planted coniferous forest. The abundances of Heptageniidae, Baetiidae, Stenopsychidae, Uenoidae, Chironomidae, and Potamidae in planted coniferous forest were significantly greater than in old-growth broad-leaved forest. If the remaining old-growth broad-leaved forest were to be converted to coniferous plantation, species that inhabit old-growth forest may become extinct.     

Diversity and geographic distribution of benthic foraminifera: a molecular perspective

The diversity and distribution of modern benthic foraminifera has been extensively studied in order to aid the paleoecological interpretation of their fossil record. Traditionally, foraminiferal species are identified based on morphological characters of their organic, agglutinated or calcareous tests. Recently, however, new molecular techniques based on analysis of DNA sequences have been introduced to study the genetic variation in foraminifera. Although the number of species for which DNA sequence data exist is still very limited, it appears that morphology-based studies largely underestimated foraminiferal diversity. Here, we present two examples of the use of DNA sequences to examine the diversity of benthic foraminifera. The first case deals with molecular and morphological variations in the well-known and common calcareous genus Ammonia. The second case presents molecular diversity in the poorly documented group of monothalamous (single-chambered) foraminifera. Both examples perfectly illustrate high cryptic diversity revealed in almost all molecular studies. Molecular results also confirm that the majority of foraminiferal species have a restricted geographic distribution and that globally distributed species are rare. This is in opposition to the theory that biogeography has no impact on the diversity of small-sized eukaryotes. At least in the case of foraminifera, size does not seem to have a main impact on dispersal capacities. However, the factors responsible for the dispersal of foraminiferal species and the extension of their geographic ranges remain largely unknown. Special Issue: Protist diversity and geographic distribution. Guest editor: W. Foissner.