石羊河中游沙漠化逆转过程土壤种子库的动态变化

在石羊河中游,应用空间代替时间的方法,选择流动沙丘以及封育恢复5a、15a和25a的沙漠化逆转过程序列,研究了沙漠化逆转过程土壤种子库的变化特征。结果表明:石羊河中游沙漠化土地土壤种子库由4科12种植物组成,种子库主要分布于表层0-5cm。在沙漠化逆转过程中,土壤种子库物种数趋于增加,物种组成以1年生草本植物占优势逐渐向多年生草本植物和半灌木植物转变;种子库密度、表层土壤种子比例、物种多样性指数、与地上植被的相似性呈现先增大后降低趋势;沙漠化土地生态恢复间隔的时间越长,土壤种子库间的相似性程度越低;沙漠化土地与地带性植被区种子库的相似性逐渐增大,但是恢复25a沙漠化土地也仅达到0.36。研究认为,沙漠化逆转过程也是沙漠化土地土壤种子库向地带性植被土壤种子库演变的过程,而且是一个十分缓慢的过程,该研究有助于丰富干旱区土壤种子库的理论和指导干旱内陆河流域沙漠化土地的生态恢复实践。     

Forecasting species range dynamics with process‐explicit models: matching methods to applications

Knowing where species occur is fundamental to many ecological and environmental applications. Species distribution models (SDMs) are typically based on correlations between species occurrence data and environmental predictors, with ecological processes captured only implicitly. However, there is a growing interest in approaches that explicitly model processes such as physiology, dispersal, demography and biotic interactions. These models are believed to offer more robust predictions, particularly when extrapolating to novel conditions. Many process–explicit approaches are now available, but it is not clear how we can best draw on this expanded modelling toolbox to address ecological problems and inform management decisions. Here, we review a range of process–explicit models to determine their strengths and limitations, as well as their current use. Focusing on four common applications of SDMs – regulatory planning, extinction risk, climate refugia and invasive species – we then explore which models best meet management needs. We identify barriers to more widespread and effective use of process‐explicit models and outline how these might be overcome. As well as technical and data challenges, there is a pressing need for more thorough evaluation of model predictions to guide investment in method development and ensure the promise of these new approaches is fully realised.     

基于QuickBird的城市建筑景观格局梯度分析

研究城市建筑景观的梯度变化特征,对城市规划与管理的合理调整有着重要的意义.应用QuickBird影像,基于Barista软件提取了建筑物三维信息,采用建筑平均高度、建筑密度、容积率、建筑高度标准差、建筑体形系数等指标,结合梯度分析法研究了铁西区建筑景观格局的梯度变化.结果表明:从1997到2008年,低层与多层建筑是主要的建筑景观组分,平房与低层建筑占地面积比重显著下降,多层、中高层与高层建筑比重上升.建筑平均高度、容积率与建筑高度标准差逐年上升,建筑密度、建筑体形系数与景观形状指数下降.建筑向垂直方向扩展,建筑能耗降低,形状更加规则.建筑景观的梯度变化与距市中心距离的远近没有关系,与区域功能相关,商业区建筑平均高度与容积率最高,政府所在地范围内建筑密度最大.     

Characterization of the distribution of glucose oxidase in Penicillium sp. CBS 120262 and Aspergillus niger NRRL-3 cultures and its effect on integrated product recovery

Glucose oxidase (GO) is an important industrial enzyme typically purified from Penicillium and Aspergillus sp. As GO distribution within the cultures influences process design for maximal product recovery, distribution of GO activity in Penicillium sp. CBS 120262 and Aspergillus niger NRRL-3, during mid-exponential and stationary phases, is compared. On progression from mid-exponential to stationary phase, the percentage GO activity in the cytoplasm decreased 1.6- and 1.3-fold in Penicillium sp. and A. niger respectively. In Penicillium sp., a concomitant 1.8- and 1.9-fold decrease in the percentage GO activity in the cell envelope and slime mucilage respectively, translated into a 2.0-fold increase in the extracellular fluid. In A. niger, decreasing cytoplasmic GO activity was accompanied by 1.3-fold increases in the cell envelope and slime mucilage, with a 1.3-fold decrease in the extracellular fluid. Similar trends were observed in specific GO activities. As final GO activity recovered is governed by the purification program, recovery from the extracellular fluid plus cell extract or from the extracellular fluid only were compared through simulating processes of varying complexity. A critical yield for each purification stage was identified above which recovery from the extracellular fluid plus cell extract exceeded that from extracellular fluid alone. These results highlight the influence of microorganism, harvest time and efficiency of downstream process on GO activity delivered. In the systems studied, Penicillium sp. is the organism of choice and should be harvested during stationary phase. The purification process chosen should be informed by both enzyme distribution and individual purification stages yields.     

黑脊倒刺鲃生精细胞拟染色体的形成过程

电子显微镜观察了黑脊倒刺把生精细胞中拟染色体的形成过程。拟染色体在初级精原细胞中形成。在初级精原细胞的细胞核中,拟染色体前体物质先附着于核膜内侧,该处核膜崩溃并在拟染色体前体物质的内侧,新核膜形成。新核膜将拟染色体前体物质分隔出细胞核之外新核膜呈凹陷状。拟染色体前体物质集中于该凹陷中,并聚集成拟染色体。新核膜上有较大的空隙核内还有少量拟染色体前体物质通过该空隙进入核表面的凹陷中,并结合到拟染色体上黑脊倒刺鲃生精细胞拟染色体的形成方式与通常认为的核内物质通过核孔排出核外的方式不同,似可表明核内物质向外运输存在着另一种机制。拟染色体形成后不久就与线粒体结合,并离开核凹在以后的发育过程中,拟染色体又与线粒体分离。     

Primary processes in heme-based sensor proteins

A wide and still rapidly increasing range of heme-based sensor proteins has been discovered over the last two decades. At the molecular level, these proteins function as bistable switches in which the catalytic activity of an enzymatic domain is altered mostly by binding or dissociation of small gaseous ligands (O₂, NO or CO) to the heme in a sensor domain. The initial “signal” at the heme level is subsequently transmitted within the protein to the catalytic site, ultimately leading to adapted expression levels of specific proteins. Making use of the photolability of the heme-ligand bond that mimics thermal dissociation, early processes in this intra-protein signaling pathway can be followed using ultrafast optical spectroscopic techniques; they also occur on timescales accessible to molecular dynamics simulations. Experimental studies performed over the last decade on proteins including the sensors FixL (O₂), CooA (CO) and soluble guanylate cyclase (NO) are reviewed with an emphasis on emerging general mechanisms. After heme-ligand bond breaking, the ligand can escape from the heme pocket and eventually from the protein, or rebind directly to the heme. Remarkably, in all sensor proteins the rebinding, specifically of the sensed ligand, is highly efficient. This ”ligand trap” property possibly provides means to smoothen the effects of fast environmental fluctuations on the switching frequency. For 6-coordinate proteins, where exchange between an internal heme-bound residue and external gaseous ligands occurs, the study of early processes starting from the unliganded form indicates that mobility of the internal ligand may facilitate signal transfer. This article is part of a Special Issue entitled: Oxygen Binding and Sensing Proteins.     

大尺度生态水文模型的构建及其与GIS集成

基于过程模拟手段揭示森林植被的生态水文功能和变化机制,已经成为生态水文学研究的重要手段。由于陆地生态水文过程的非线性和尺度问题的广泛性,基于过程的坡面或小流域尺度的分布式水文模型不适合大流域的水文过程的分析和预测;另外,传统的水文模型主要侧重水文物理过程,只有充分耦合植被生态过程,才能从机制上揭示森林植被参与水文循环的调控作用。依据大流域的水文过程特点,从5个方面阐述了大尺度生态水文模型构建过程中的主要问题：①大尺度生态水文模型的概念和结构;②尺度的界定与匹配;③离散化数据集的建立,着重分析了植被覆盖、土壤质地、山地气候等主要数据集的建立方法;④分布式与集总式模型,这两类模型可以从他们的基本空间单元上进行区分,数字流域的建立和空间分析手段使得集总式模型和分布式模型得到了很好的结合;⑤生态水文模型与GIS的集成。分析了4种不同的集成方式,“松散型”的集成方式因其编程工作量小而被广泛采用。集成的目的不仅是要提高模拟的技术水平,更要提高系统整体的概念化水平。     

时间序列谱分析在作物究研中的应用探讨(一)

本文分两个部分分别探讨了单一和两维时间序列谱分析在研究作物量变过程规律中的意义、应用的原理和方法,并通过实例结果的分折表明这些方法的可行性,所揭示的生物学意义和这些方法的应用在研究作物量变过程中将可能具有的广泛的研究前景。     

Can phenological models predict tree phenology accurately in the future? The unrevealed hurdle of endodormancy break

The onset of the growing season of trees has been earlier by 2.3 days per decade during the last 40 years in temperate Europe because of global warming. The effect of temperature on plant phenology is, however, not linear because temperature has a dual effect on bud development. On one hand, low temperatures are necessary to break bud endodormancy, and, on the other hand, higher temperatures are necessary to promote bud cell growth afterward. Different process‐based models have been developed in the last decades to predict the date of budbreak of woody species. They predict that global warming should delay or compromise endodormancy break at the species equatorward range limits leading to a delay or even impossibility to flower or set new leaves. These models are classically parameterized with flowering or budbreak dates only, with no information on the endodormancy break date because this information is very scarce. Here, we evaluated the efficiency of a set of phenological models to accurately predict the endodormancy break dates of three fruit trees. Our results show that models calibrated solely with budbreak dates usually do not accurately predict the endodormancy break date. Providing endodormancy break date for the model parameterization results in much more accurate prediction of this latter, with, however, a higher error than that on budbreak dates. Most importantly, we show that models not calibrated with endodormancy break dates can generate large discrepancies in forecasted budbreak dates when using climate scenarios as compared to models calibrated with endodormancy break dates. This discrepancy increases with mean annual temperature and is therefore the strongest after 2050 in the southernmost regions. Our results claim for the urgent need of massive measurements of endodormancy break dates in forest and fruit trees to yield more robust projections of phenological changes in a near future.     

The condition, length and age distribution of pikeperch, Stizostedion lucioperca (L.) in Lake Peipsi

The population of pikeperch in L. Peipsi was studied with respect to average number per haul, length distribution of fishes in experimental catches, condition factor (according to Fulton) and length-weight relationship in autumn 1993–1995.The relatively good growth rate and condition of pikeperch in the lake indicates that the waterbody is suitable for this fish. However, the length and age distribution of pikeperch in different years as well as the decreasing total number of fishes in catches demonstrate that the population of pikeperch is suppressed due to overfishing during the last years.