Temporally dynamic antagonism between transcription and chromatin compaction controls stochastic photoreceptor specification in flies

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Ash2l-1调控小鼠卵黄囊早期造血

作为甲基转移酶MLL/SET1复合体的核心成分之一,ASH2L能够促进组蛋白H3K4me3修饰的形成,并在小鼠早期胚胎发育过程中行使重要功能.在小鼠中,由于启动子的选择性使用,Ash2l会转录成两种不同长度的转录本并形成两种蛋白质亚型:ASH2L-1和ASH2L-2.目前有关该基因在小鼠胚胎发育中的作用机制及不同亚型的功能还不清楚.本文利用CRISPR/Cas9技术特异敲除Ash2l-1并研究该亚型的生理学功能.研究结果发现,当Ash2l-1缺失时,小鼠胚胎在E9.5~E10.5时发生致死.特别是Ash2l-1-/-E9.5胚胎的卵黄囊血管和早期造血发育存在明显缺陷.转录组测序结果显示,Ash2l-1的缺失影响红细胞发育和成熟、血管发生和形成相关基因的表达.H3K4me3的CUT&RUN结果显示,在一些表达下调关键基因的启动子区,H3K4me3修饰水平出现下降.以上结果表明,Ash2l-1在小鼠卵黄囊的早期造血和血管形成过程中是必不可少的,它可能是通过调控关键基因启动子区的H3K4me3修饰水平而控制这些基因的表达,从而在相关过程中行使功能.     

Transferability of Cucurbita SSR markers for genetic diversity assessment of Turkish bottle gourd (Lagenaria siceraria) genetic resources

The genetic diversity present in crop landraces represents a valuable genetic resource for breeding and genetic studies. Bottle gourd (Lagenaria siceraria) landraces in Turkey are highly genetically diverse. However, the limited genomic resources available for this crop hinder the molecular characterization of Turkish bottle gourd germplasm for its adequate conservation and management. Therefore, we evaluated the efficacy of 40 SSR markers from major cucurbit crops (Cucurbita pepo L. and Cucurbita moschata L.) in 30 bottle gourd landraces, together with 16 SRAP primer combinations. In addition, we compared the genetic relationship between bottle gourd and 31 other cucurbit accessions (11 Cucurbita maxima, 3 C. moschata, 5 C. pepo subsp. ovifera, 10 C. pepo and 2 Luffa cylindrica). Twenty-seven Cucurbita SSR markers showed transferability to bottle gourd. SSR markers amplified 59 alleles, in bottle gourd genome with an average of 1.64 alleles per locus. Together, SSR and SRAP markers amplified 453 fragments across the 61 accessions, and clearly discriminated L. siceraria and L. cylindrica from the other cucurbit species. Genetic diversity analysis separated edible cucurbit from ornamentals, while population structure analysis classified L. siceraria in two subpopulations defined by fruit shape, rather than geographical origin. The results indicated that the genomic resources available for Cucurbita species are valuable to study and preserve the genetic diversity of bottle gourd in Turkey.     

Isolation and characterization of a proteinase from white gourd

A proteinase from the sarcocarp of Benincasa cerifera was purified. ItsMW was estimated by two different methods to be about 50000. The maximum activity was found in the alkaline pH region against casein as a substrate. The enzyme was strongly inhibited by di-isopropyl fluorophosphate and not inhibited by EDTA and p-chloromercuribenzoic acid.     

A novel non-SET domain multi-subunit methyltransferase required for sequential nucleosomal histone H3 methylation by the mixed lineage leukemia protein-1 (MLL1) core complex

Gene expression within the context of eukaryotic chromatin is regulated by enzymes that catalyze histone lysine methylation. Histone lysine methyltransferases that have been identified to date possess the evolutionarily conserved SET or Dot1-like domains. We previously reported the identification of a new multi-subunit histone H3 lysine 4 methyltransferase lacking homology to the SET or Dot1 family of histone lysine methyltransferases. This enzymatic activity requires a complex that includes WRAD (WDR5, RbBP5, Ash2L, and DPY-30), a complex that is part of the MLL1 (mixed lineage leukemia protein-1) core complex but that also exists independently of MLL1 in the cell. Here, we report that the minimal complex required for WRAD enzymatic activity includes WDR5, RbBP5, and Ash2L and that DPY-30, although not required for enzymatic activity, increases the histone substrate specificity of the WRAD complex. We also show that WRAD requires zinc for catalytic activity, displays Michaelis-Menten kinetics, and is inhibited by S-adenosyl-homocysteine. In addition, we demonstrate that WRAD preferentially methylates lysine 4 of histone H3 within the context of the H3/H4 tetramer but does not methylate nucleosomal histone H3 on its own. In contrast, we find that MLL1 and WRAD are required for nucleosomal histone H3 methylation, and we provide evidence suggesting that each plays distinct structural and catalytic roles in the recognition and methylation of a nucleosome substrate. Our results indicate that WRAD is a new H3K4 methyltransferase with functions that include regulating the substrate and product specificities of the MLL1 core complex.     

Inbreeding effects on blossom volatiles in Cucurbita pepo subsp. texana (Cucurbitaceae)

Self-pollination by plants gives rise to inbreeding depression. There is increasing recognition that plant inbreeding can have significant implications for interactions between plants and other organisms, including insects and pathogens. Many of these interactions are mediated by plant-derived volatiles, but the effects of inbreeding on volatile production have not previously been investigated. We examined variation in flower volatile production by the wild gourd Cucurbita pepo subsp. texana as a function of inbreeding, sex of the flower, and maternal line. We compared first-generation selfed progeny to outcrossed progeny to assess variation in blossom volatiles due to mating system. Our data indicate that self-pollination reduces total volatile production and changes the relative composition of individual compounds released by C. pepo subsp. texana blossoms. These findings have potentially important implications for interactions between C. pepo subsp. texana and its pollinators and herbivores-including diabroticite cucumber beetles, which vector the bacterial pathogen Erwinia tracheiphila-because previous studies have shown that a number of the individual compounds that vary with inbreeding level can influence insect behavior. We also found significant differences between the volatile profiles of male and female flowers and across maternal families.     

Effects of low night temperature on pigments,chl <Emphasis Type="Italic">a</Emphasis> fluorescence and energy allocation in two bitter gourd (<Emphasis Type="Italic">Momordica charantia</Emphasis> L.) genotypes

Using two different inbred lines of Momordica charantia (bitter gourd), Y-106-5 and Z-1-4, the cell membrane stability, leaf water potential, pigment contents and the chlorophyll a fluorescence were investigated with different low night temperature (LNT) treatments over a 7 day time period and the sequent a 7 day recovery. Under LNT treatments, electrolyte leakage increased in both inbred lines and it increased more significantly in Y-106-5 plants than that in Z-1-4. The content of Chl b and total Chl decreased, while the Chl a/b ratio increased in stressed plants of the two lines. Almost all LNT treatments induced little change in Chl a content in Z-1-4 whereas obvious decreases in 5 and 8°C treated Y-106-5 plants were observed. Chilling changed the water status of plants and induced decreases of leaf water potential (LWP) in 5 and 8°C treated plants. LNT treatments also resulted in changes in the chlorophyll fluorescence parameters in bitter gourd leaves. The potential PSII activity (F _v/F _o) was reduced obviously by LNT stress and showed more sensitive to LNT than the maximum quantum efficiency of PSII primary photochemistry (F _v/F _m). The efficiency of open PSII centers exhibited a slight decrease whereas the photochemical quenching efficient (q _P) was affected more seriously by LNT stress in both two inbred lines. The allocation of energy was rearranged by LNT stress. The light fraction used for PSII photochemistry (P) was reduced, while that used for heat dissipation (D) and the third fraction of absorbed light defines excess energy (E) increased due to the chilling stress. The impacts of LNT stress on bitter gourd generally increased with the number of LNT chilling and the severe night chilling. Plants were little affected by 12°C night chilling and the most acute damage was found in 5°C night chilling treatments. A 7 day recovery mitigated the adverse effects of LNT for both lines and almost all LNT treated plants restored to control levels except 5°C night chilling treated Y-106-5 plants. The two lines have a variance in tolerance to LNT stress and display obvious differences of phenotypes under extreme conditions.     

苦瓜主要品质性状的遗传变异、相关和通径分析

对23份苦瓜材料的10个品质性状进行了研究。结果表明,苦瓜维生素C、还原糖、有机酸、果瘤、果色、果刺和苦味遗传变异系数大,遗传力高;水分含量遗传变异系数很小;风味遗传变异系数较小,遗传力低。苦瓜4个内在营养品质之间相关性小,而4个外观品质性状之间关系密切。两个味觉品质与4个内在营养品质之间相关性小,但与4个外观品质之间关系密切。内在营养品质与外观品质之间有一定关系。通径分析提出通过降低果实的苦味和有机酸含量来提高风味品质;通过水分含量和果瘤两性状的直接选择来实现对维生素C的间接选择。     

Ungulate browsing in winter reduces the growth of <Emphasis Type="Italic">Fraxinus</Emphasis> and <Emphasis Type="Italic">Acer</Emphasis> saplings in subsequent unbrowsed years

Browsing by ungulates has become a hotly debated issue in many European mountain forests in the past century. Acer pseudoplatanus L. and Fraxinus excelsior L. are broadleaved tree species that are preferentially browsed by roe deer (Capreolus capreolus) in central Europe. We analyzed growth data from shaded saplings of both tree species to quantify the extent to which height growth after game browsing is reduced in subsequent, unbrowsed years in forest stands. Sixty saplings of F. excelsior and A. pseudoplatanus from forest stands at Albisriederberg (Switzerland) were available to us that had been dissected into pieces that then were split in the middle for counting tree rings and assessing ungulate damage. We fitted the von Bertalanffy growth equation to these height growth data and included a reduction factor for winter browsing. Both tree species showed significantly reduced height growth in unbrowsed years after one to several browsing events in winter, and this effect increased with the number of browsing events. Saplings with a high growth rate showed a higher growth reduction. After winter browsing, height growth of A. pseudoplatanus saplings was less affected in unbrowsed years than that of F. excelsior saplings. We conclude that browsed saplings of these species in forest stands are not able to compensate browsing-induced height loss, but that height differences between browsed and unbrowsed saplings probably increase over time. A comparison between our analysis and the parameters estimated using equations published by Eiberle for predicting age at 130 cm height suggests that our parameter values are rather conservative estimates of the growth reduction effect after winter browsing. Neither F. excelsior nor A. pseudoplatanus show a distinct pattern in browsing-induced growth reduction with respect to soil moisture, nutrient level, and altitude. We thus conclude that our results are likely to be valid for a wide range of forested sites.