In a comfort zone and beyond—Ecological plasticity of key marine mediators

Copepods of the genus Calanus are the key components of zooplankton. Understanding their response to a changing climate is crucial to predict the functioning of future warmer high‐latitude ecosystems. Although specific Calanus species are morphologically very similar, they have different life strategies and roles in ecosystems. In this study, C. finmarchicus and C. glacialis were thoroughly studied with regard to their plasticity in morphology and ecology both in their preferred original water mass (Atlantic vs. Arctic side of the Polar Front) and in suboptimal conditions (due to, e.g., temperature, turbidity, and competition in Hornsund fjord). Our observations show that “at the same place and time,” both species can reach different sizes, take on different pigmentation, be in different states of population development, utilize different reproductive versus lipid accumulation strategies, and thrive on different foods. Size was proven to be a very mutable morphological trait, especially with regard to reduced length of C. glacialis. Both species exhibited pronounced red pigmentation when inhabiting their preferred water mass. In other domains, C. finmarchicus individuals tended to be paler than C. glacialis individuals. Gonad maturation and population development indicated mixed reproductive strategies, although a surprisingly similar population age structure of the two co‐occurring species in the fjord was observed. Lipid accumulation was high and not species‐specific, and its variability was due to diet differences of the populations. According to the stable isotope composition, both species had a more herbivorous diatom‐based diet in their original water masses. While the diet of C. glacialis was rather consistent among the domains studied, C. finmarchicus exhibited much higher variability in its feeding history (based on lipid composition). Our results show that the plasticity of both Calanus species is indeed impressive and may be regulated differently, depending on whether they live in their “comfort zone” or beyond it.     

Relationship between aquifer biofilms and unattached microbial indicators of urban groundwater contamination

Aquifers, springs and other groundwater‐dependent ecosystems are threatened by urban land use, which causes water quality deterioration through nutrient loading, sewage infiltration, groundwater extraction and, along coasts, seawater intrusion. The presence of certain microbes in groundwater can indicate that an aquifer is anthropogenically contaminated. Interpretations made from observations of indicator microbes in groundwater are limited because the relationship between the presumably allochthonous indicator microbes and relevant autochthonous microbial communities has not been characterized. This study addressed whether autochthonous aquifer biofilms can influence the presence of presumed microbial indicators in groundwater, and simultaneously used microbial indicators to trace sources of urban contamination at a karst spring of conservation concern. These questions were approached using a 17‐month time series analysis of attached biofilm and adjacent unattached bacteria in the submerged karst aquifer conduit associated with this spring. Environmental 16S rRNA gene sequencing was performed to characterize these communities, and community structure data were contextualized with groundwater geochemical and hydrogeological measurements. Linear regression models were developed to explain the relative abundance patterns of indicator microbes and other unattached microbes at this site. The results of this study suggest that dominant aquifer biofilms do not influence the presence of unattached microbial taxa that are presumed to be indicators of groundwater contamination, and generated new information about the origin of coliform bacteria at the study site. These results build confidence in the use of microbial indicators in groundwater‐dependent ecosystem conservation strategies and inform future management plans for urban aquifers and springs worldwide.     

陆地生态系统环境控制实验的研究方法及技术体系

生物及生态系统与环境变化间的反馈关系及其过程机制是生态学研究的重要内容。不同类型的生物环境因素控制实验以及大尺度的联网野外控制实验被认为是认识生态系统响应和适应环境变化过程机制、精细定量表达的有效手段及认知过程的加速器。近年来发展了大型野外物理模拟实验装置网络(如ECOTRON)、生态系统分析与实验平台(AnaEE)、国际干旱实验研究网络(Drought Network)、氮沉降联合实验网络(Nutrient Network),以及基于各区域性生态观测实验站的联网控制实验(如USA-ILTER)。发展大陆尺度联网实验研究平台事业正日益受到学术界的重视,将会在认知生态系统环境响应过程机制方面发挥更重要的作用。基于以上背景,本文综述了生态系统环境控制实验的研究方法和实验体系的发展,明确指出各种类型的生物环境控制实验需要形成联合协作体系,共同解决生态系统对环境变化的响应及适应的基本科学问题。目前的控制实验包括: 1) 实验室封闭装置内的生物生理生态学控制实验;2) 野外实验场的半开放部分环境要素控制实验;3) 近自然状态的野外环境控制实验;以及4) 基于野外生态站的联网控制实验。进而,本文还深入讨论了陆地生态系统的环境响应及适应过程机制实验系统设计的发展趋势,分析了基于大尺度自然环境梯度实验及生态站尺度的要素控制实验的优势,提出了整合两种实验技术、发展新一代的野外联网实验体系的科学设想,讨论了基于野外联网控制实验的研究体系,论证了研究生态系统对环境变化短期响应和长期适应的规律和机制、生态系统环境响应定量表达的技术途径。若本文提出的控制实验体系设计方案能够得以实施,必将大大促进我国乃至全球生态系统和环境变化科学的研究水平,对我国应对气候变化和生态环境建设具有重要的科学意义。     

国家公园陆地自然生态系统完整性与原真性评价方法探索: 以钱江源国家公园体制试点为例

中国建立国家公园的目的是保护自然生态系统的完整性和原真性, 促进生物多样性保护。国家公园的完整性和原真性评价是国家公园的布局规划、边界范围确定以及功能区划等研究的前提条件。为了评估国家公园自然生态系统完整性和原真性状态, 本文基于陆地自然生态系统的结构和功能, 通过指标筛选、专家咨询、指标量化和建立综合评价模型, 构建了陆地自然生态系统完整性与原真性的评价指标体系及其量化评价方法。该评价方法包括5个自然生态系统完整性指标、5个自然生态系统原真性指标和2个综合评价指标。以浙江省钱江源国家公园体制试点为例, 本文初步评估了其生态系统完整性与原真性状态, 并对评价结果进行了分级。按照本研究的评价方法, 钱江源国家公园体制试点的自然生态系统完整性评价结果为52.83%, 评价等级为较差; 自然生态系统原真性评价结果为87.06%, 评价等级为好。钱江源国家公园体制试点有待关注和提升的指标有保护区域完整性指数(27.00%)和旗舰种适宜生境完整性指数(53.04%)。最后, 本文结合研究区域评价结果对生态系统完整性和原真性领域应关注的问题进行了讨论。该自然生态系统完整性和原真性评价方法可提供一种评价指标覆盖较全面、数据易获取, 且评价结果易被决策者和管理者理解的评价思路。     

A Novel Alveolate in Bivalves with Chemosynthetic Bacteria Inhabiting Deep‐Sea Methane Seeps

It has recently been unveiled that a wide variety of microbial eukaryotes (protists) occur in chemosynthetic ecosystems, such as hydrothermal vents and methane seeps. However, there is little knowledge regarding protists associated with endemic animals inhabiting these environments. In the present study, utilizing PCR techniques, we detected fragments of the small subunit ribosomal RNA gene (SSU rRNA gene) from a particular protist from gill tissues of a significant fraction of the vesicomyid clams Calyptogena soyoae and C. okutanii complex and of the mussel Bathymodiolus platifrons and B. japonicus, all of which harbor chemosynthetic endosymbiont bacteria and dominate methane seeps in Sagami Bay, Japan. Based on the phylogeny of SSU rRNA gene, the organism in question was shown to belong to Alveolata. It is noteworthy that this protist did not affiliate with any known alveolate group, although being deeply branched within the lineage of Syndiniales, for which the monophyly was constantly recovered, but not robustly supported. In addition, the protist detected using PCR followed by sequencing was localized within gill epithelial cells of B. platifrons with whole‐mount fluorescence in situ hybridization. This protist may be an endoparasite or an endocommensal of Calyptogena spp. and Bathymodiolus spp., and possibly have physiological and ecological impacts on these bivalves.     

Sea ice phenology and timing of primary production pulses in the Arctic Ocean

Arctic organisms are adapted to the strong seasonality of environmental forcing. A small timing mismatch between biological processes and the environment could potentially have significant consequences for the entire food web. Climate warming causes shrinking ice coverage and earlier ice retreat in the Arctic, which is likely to change the timing of primary production. In this study, we test predictions on the interactions among sea ice phenology and production timing of ice algae and pelagic phytoplankton. We do so using the following (1) a synthesis of available satellite observation data; and (2) the application of a coupled ice‐ocean ecosystem model. The data and model results suggest that, over a large portion of the Arctic marginal seas, the timing variability in ice retreat at a specific location has a strong impact on the timing variability in pelagic phytoplankton peaks, but weak or no impact on the timing of ice‐algae peaks in those regions. The model predicts latitudinal and regional differences in the timing of ice algae biomass peak (varying from April to May) and the time lags between ice algae and pelagic phytoplankton peaks (varying from 45 to 90 days). The correlation between the time lag and ice retreat is significant in areas where ice retreat has no significant impact on ice‐algae peak timing, suggesting that changes in pelagic phytoplankton peak timing control the variability in time lags. Phenological variability in primary production is likely to have consequences for higher trophic levels, particularly for the zooplankton grazers, whose main food source is composed of the dually pulsed algae production of the Arctic.     

The impacts of climate change and human activities on biogeochemical cycles on the Qinghai‐Tibetan Plateau

With a pace of about twice the observed rate of global warming, the temperature on the Qinghai‐Tibetan Plateau (Earth's ‘third pole’) has increased by 0.2 °C per decade over the past 50 years, which results in significant permafrost thawing and glacier retreat. Our review suggested that warming enhanced net primary production and soil respiration, decreased methane (CH₄) emissions from wetlands and increased CH₄ consumption of meadows, but might increase CH₄ emissions from lakes. Warming‐induced permafrost thawing and glaciers melting would also result in substantial emission of old carbon dioxide (CO₂) and CH₄. Nitrous oxide (N₂O) emission was not stimulated by warming itself, but might be slightly enhanced by wetting. However, there are many uncertainties in such biogeochemical cycles under climate change. Human activities (e.g. grazing, land cover changes) further modified the biogeochemical cycles and amplified such uncertainties on the plateau. If the projected warming and wetting continues, the future biogeochemical cycles will be more complicated. So facing research in this field is an ongoing challenge of integrating field observations with process‐based ecosystem models to predict the impacts of future climate change and human activities at various temporal and spatial scales. To reduce the uncertainties and to improve the precision of the predictions of the impacts of climate change and human activities on biogeochemical cycles, efforts should focus on conducting more field observation studies, integrating data within improved models, and developing new knowledge about coupling among carbon, nitrogen, and phosphorus biogeochemical cycles as well as about the role of microbes in these cycles.     

The SER primer and climate change

The SER Primer on Ecological Restoration provides a succinct introduction to, and overview of, the rapidly growing field of ecological restoration. The Primer was issued initially in 2002 by the Society for Ecological Restoration (SER) and reissued verbatim 2 years later in a more attractive format ( http://www.ser.org/resources;resources-detail-view/ser-international-primer-on-ecological-restoration ). A SER committee recently began deliberations to update the Primer, and much discussion is underway. As two of the Primer's principal authors, we were invited to share our views on how the Primer can be advantageously revised in the light of any changes or new insights since 2002. In particular, we were asked how the Primer might be modified to reflect the ways that ecological restoration address conservation issues raised by climate change and other rapid environmental shifts and global changes. We also touch on questions relating to the benefits of ecological restoration to human society, as this is an area where the Primer needs sharper focus. We have structured the following in a ‘Frequently Asked Questions’ format to highlight issues raised in the recent literature and to focus attention on other issues that merit consideration in the Primer revision process.     

Seismic Survey Design and Effects on Maternal Polar Bear Dens

Large-scale industrial activities can have negative effects on wildlife populations. Some of these effects, however, could be reduced with effective planning prior to development. The Coastal Plain of the Arctic National Wildlife Refuge, in northeastern Alaska, USA, is an important maternal denning area for polar bears (Ursus maritimus). Recent legislation has opened the area for potential oil and gas development. As a result, there is interest in conducting winter seismic surveys across the area that could disturb denning female polar bears and lead to decreased cub survival. We sought to demonstrate how different seismic survey designs, with and without aerial den detection surveys, could affect the level of potential effect on denning polar bears during spring (Feb–Apr). We developed 5 hypothetical seismic survey designs for a portion of the Coastal Plain ranging from no spatial or temporal restrictions on activities to explicit consideration of when and where operations can occur. We evaluated how many dens might be disturbed by seismic surveys and the average distance activity came within simulated polar bear dens. Survey design had a large effect on the estimated number of dens that could be disturbed; the scenario with the highest spatial and temporal specificity reduced the number of dens disturbed by >90% compared to the scenario with no restrictions on when and where activity could occur. The use of an aerial den detection survey prior to seismic activity further reduced the number of dens disturbed by 68% across all scenarios. The scenario with the highest spatial and temporal specificity always had the lowest level of disturbance for all scenarios with and without the aerial survey included. Our study suggests that large reductions in the probability of disturbance can occur through careful planning on the timing and distribution of proposed activities even when surveys are planned in areas with a high density of polar bear dens. Published 2019. This article is a U.S. Government work and is in the public domain in the USA. The Journal of Wildlife Management published by Wiley Periodicals, Inc. on behalf of The Wildlife Society.