High levels of cryptic species diversity uncovered in Amazonian frogs

One of the greatest challenges for biodiversity conservation is the poor understanding of species diversity. Molecular methods have dramatically improved our ability to uncover cryptic species, but the magnitude of cryptic diversity remains unknown, particularly in diverse tropical regions such as the Amazon Basin. Uncovering cryptic diversity in amphibians is particularly pressing because amphibians are going extinct globally at an alarming rate. Here, we use an integrative analysis of two independent Amazonian frog clades, Engystomops toadlets and Hypsiboas treefrogs, to test whether species richness is underestimated and, if so, by how much. We sampled intensively in six countries with a focus in Ecuador (Engystomops: 252 individuals from 36 localities; Hypsiboas: 208 individuals from 65 localities) and combined mitochondrial DNA, nuclear DNA, morphological, and bioacoustic data to detect cryptic species. We found that in both clades, species richness was severely underestimated, with more undescribed species than described species. In Engystomops, the two currently recognized species are actually five to seven species (a 150-250% increase in species richness); in Hypsiboas, two recognized species represent six to nine species (a 200-350% increase). Our results suggest that Amazonian frog biodiversity is much more severely underestimated than previously thought.     

Reducing the perversion of diversion: Applying world‐standard fish screening practices to the Murray–Darling Basin

Summary The impact of water diversion on fish populations is a global issue. Many countries have invested substantial funding into research and implementation strategies to ensure fish are protected at diversions that take water out of rivers for agriculture and other human uses. The most common management action is the installation of fish screens, and a wide range of designs are presently available that suit a large range of diversions. The Murray–Darling Basin is the largest catchment in Australia and has been substantially developed over the past 100 years to store and divert water for that protect fish from escaping into the irrigation systems. Recent studies have determined that water diversions have substantial impacts on native fish populations, but there are presently no coordinated efforts for mitigation strategies. The purpose of this review is to highlight aspects of successful screening programmes worldwide and identify those that could be directly applied to the Murray–Darling Basin. The development of similar programmes in the United States, New Zealand and the United Kingdom has identified that sufficient information and technology exists to inform the development of fish screening programmes. There is no need to commence implementation from first principles, and substantial progress can be achieved by applying successful aspects of other programmes. By identifying existing designs, defining ecological targets, developing generalised guidelines appropriate for local conditions and engaging the community, a co‐ordinated and successful fish screening programme could be directly applied to the Murray–Darling Basin. This would have substantial benefits for the long‐term sustainability of native fish without compromising water supply requirements.     

A SKULL OF HIPPARION (PROBOSCIDIPPARION) SINENSE ( PERISSODACTYLA, EQUIDAE) FROM LONGDAN,DONGXIANG OF NORTHWESTERN CHINA——Addition to the Early Pleistocene Longdan Mammalian Fauna (3)

报道了在甘肃省东乡县龙担地点发现的中国长鼻三趾马Hipparion(Proboscidipparion)sinense头骨化石.此前在早更新世龙担动物群中记述过的长鼻三趾马材料仅有一枚第三掌骨,头骨化石的发现不仅使该动物群的三趾马种级分类得到证实,同时扩大了对这个种头骨和牙齿特征的认识.由于最初建种的正型标本为老年个体,此后也未发现过中国长鼻三趾马的完好头骨化石,因此龙担的新材料将为该种的特征补充更多重要的信息,尤其是鼻切迹的构成.其鼻骨下部呈一细窄条状向前强烈延伸,组成鼻颌切迹下缘的后部,其前端尖,到达P2/P3界线水平,与前颌骨鼻突的末梢间有30 mm的距离.这些特征的识别对判断长鼻三趾马的系统关系有重要意义.     

内蒙古二连盆地冠齿兽科(哺乳纲:全齿目)化石及其生物地层学意义

描述了在内蒙古二连盆地新采集的保存较完好的冠齿兽类化石。基于牙齿特征的比较认为:Eudinoceras kholobolchiensis Osborn&Granger,1931、E.obailiensis Gabunia,1961、Metacoryphodon luminis Chow&Qi,1982和M.?minorQi,1987的个体大小、上前臼齿前尖V形脊角度、原尖前后棱发育程度、上下臼齿脊形化程度和尖脊形状及位置等特征与E.mongoliensisOsborn,1924一致,应视为后者的次主观异名;M.xintaiensisChow&Qi,1982应归入Eudinoceras属,变更为E.xintaiensis;Metacoryphodon为无效命名,应予废除。厘定后的Eudinoceras属共含有6个有效种:E.zhichengensis Lei etal., 1987、E.youngiXu,1980、E.xintaiensis Chow&Qi,1982、E.mongoliensis Osborn,1924、E.crassum Tong&Tang,1977和E.sishuiensis Wang,1994。修订了Eudinoceras属和E.mongoliensis种的齿列特征。将二连盆地冠齿兽类化石的产出层位对应至该盆地重新厘定的地层框架中,E.mongoliensis集中在阿山头组,能确定的最早出现层位为阿山头组底部的AS-1层,最晚出现层位为阿山头组上部的AS-5层,其时代为早始新世中期,约为53～49Ma。     

Linking nitrogen partitioning and species abundance to invasion resistance in the Great Basin

Resource partitioning has been suggested as an important mechanism of invasion resistance. The relative importance of resource partitioning for invasion resistance, however, may depend on how species abundance is distributed in the plant community. This study had two objectives. First, we quantified the degree to which one resource, nitrogen (N), is partitioned by time, depth and chemical form among coexisting species from different functional groups by injecting ¹⁵N into soils around the study species three times during the growing season, at two soil depths and as two chemical forms. A watering treatment also was applied to evaluate the impact of soil water content on N partitioning. Second, we examined the degree to which native functional groups contributed to invasion resistance by seeding a non-native annual grass into plots where bunchgrasses, perennial forbs or annual forbs had been removed. Bunchgrasses and forbs differed in timing, depth and chemical form of N capture, and these patterns of N partitioning were not affected by soil water content. However, when we incorporated abundance (biomass) with these relative measures of N capture to determine N sequestration by the community there was no evidence suggesting that functional groups partitioned different soil N pools. Instead, dominant bunchgrasses acquired the most N from all soil N pools. Consistent with these findings we also found that bunchgrasses were the only functional group that inhibited annual grass establishment. At natural levels of species abundance, N partitioning may facilitate coexistence but may not necessarily contribute to N sequestration and invasion resistance by the plant community. This suggests that a general mechanism of invasion resistance may not be expected across systems. Instead, the key mechanism of invasion resistance within a system may depend on trait variation among coexisting species and on how species abundance is distributed in the system.     

Flow-related patterns in abundance and composition of the fish fauna of a degraded Australian lowland river

1. A 7‐year study was conducted in three hydrologically distinct sections within the highly regulated, lowland Campaspe River to investigate the influence of hydrology on temporal and spatial patterns in fish composition, abundance and recruitment. One section had 6 months, one section 2 months and one section no months of increased flow due to storage releases. The fish fauna of the less regulated, nearby Broken River served as a reference to which that of the Campaspe River was compared for the last 3 years of the study to allow insight into the relative effects of hydrology, barriers to movement and other environmental characteristics. The study included one high‐flow year, a moderate‐flow year and five low‐flow years. 2. A total of 16 fish species – 10 native and six alien – were caught in the Campaspe River, although of the native species, only three are considered to have self‐sustaining populations. The remaining species are either itinerants or a result of stocking. Alien species comprised approximately 64% of the total biomass of all fish caught. 3. Overall composition of the fish fauna did not differ significantly by year, but did by section of river. Species richness and the abundance of most of the dominant species also differed significantly by river section, but there was little inter‐annual variation in the abundance of any species, except for European perch and for common carp; the latter showing an increase in abundance following a high‐flow event during the spring of 2000 as a result of recruitment. 4. Overall faunal composition was not influenced by hydrology. However, multiple regression indicated that species richness, abundance of the dominant species and abundance of young‐of‐year (YOY) of golden perch, European perch and common carp all were influenced significantly by hydrological variables. The nature of the relationships was dependent on river section and hydrological season (‘winter’ or ‘spring/summer’). Of note was the result that the total abundance of fish and that of YOY common carp were significantly positively related to the number of spells above the threshold for movement upstream through the lower two weirs in the Campaspe River. Only one significant relationship between hydrological and fish‐related variables was found for the upper river section, whereas seven and five were found for the lower and middle sections respectively. 5. Comparisons with fish collected in the Broken River over 3 years suggest that the fauna of the Broken River is in a more natural state than that of the Campaspe River. Since the two rivers do not differ substantially in water quality, and since both contain significant weirs, which act as barriers to movement of fish, flow regulation is most likely to be the major reason for the poor state of the fauna in the Campaspe River.     

Early evidence of the genus Homo in East Asia

The timing and route of the earliest dispersal from Africa to Eastern Asia are contentious topics in the study of early human evolution because Asian hominin fossil sites with precise age constraints are very limited. Here we report new high-resolution magnetostratigraphic results that place stringent age controls on excavated hominin incisors and stone tools from the Yuanmou Basin, southwest China. The hominin-bearing layer resides in a reverse polarity magnetozone just above the upper boundary of the Olduvai subchron, yielding an estimated age of 1.7Ma. The finding represents the age of the earliest documented presence of Homo, with affinities to Homo erectus, in mainland East Asia. This age estimate is roughly the same as for H. erectus in island Southeast Asia and immediately prior to the oldest archaeological evidence in northeast Asia. Mammalian fauna and pollen obtained directly from the hominin site indicate that the Yuanmou hominins lived in a varied habitat of open vegetation with patches of bushland and forest on an alluvial fan close to a lake or swamp. The age and location are consistent with a rapid southern migration route of initial hominin populations into Eastern Asia.     

甘肃临夏盆地晚中新世大唇犀化石的年龄结构与生活环境

甘肃临夏盆地的晚中新世红粘土堆积中含有大量的三趾马动物群化石,其中犀科化石,特别是大唇犀最为丰富。通过对临夏盆地晚中新世具有代表性的大唇犀化石的年龄结构的分析,初步了解到化石群各年龄段个体的百分比和种群动态。大唇犀化石中成年个体的数量占优势,明显多于老年个体,与正常生活群中的年龄结构吻合,由此可初步断定是突发性事件引起了犀牛种群的灾害性死亡。再进一步对化石的风化、磨蚀、聚集状态及所受的水动力特征等进行分析,发现骨骼受到了弱水流的短距离搬运,说明化石埋藏地离动物死亡地不远。以上分析结果与沉积学特征相结合,说明临夏盆地晚中新世三趾马动物群的集群死亡可能与严重的干旱化事件有关。     

Effects of an experimental drought on soil emissions of carbon dioxide, methane, nitrous oxide, and nitric oxide in a moist tropical forest

Changes in precipitation in the Amazon Basin resulting from regional deforestation, global warming, and El Niño events may affect emissions of carbon dioxide (CO₂), methane (CH₄), nitrous oxide (N₂O), and nitric oxide (NO) from soils. Changes in soil emissions of radiatively important gases could have feedback implications for regional and global climates. Here we report results of a large‐scale (1 ha) throughfall exclusion experiment conducted in a mature evergreen forest near Santarém, Brazil. The exclusion manipulation lowered annual N₂O emissions by >40% and increased rates of consumption of atmospheric CH₄ by a factor of >4. No treatment effect has yet been detected for NO and CO₂ fluxes. The responses of these microbial processes after three rainy seasons of the exclusion treatment are characteristic of a direct effect of soil aeration on denitrification, methanogenesis, and methanotrophy. An anticipated second phase response, in which drought‐induced plant mortality is followed by increased mineralization of C and N substrates from dead fine roots and by increased foraging of termites on dead coarse roots, has not yet been detected. Analyses of depth profiles of N₂O and CO₂ concentrations with a diffusivity model revealed that the top 25 cm soil is the site of most of the wet season production of N₂O, whereas significant CO₂ production occurs down to 100 cm in both seasons, and small production of CO₂ occurs to at least 1100 cm depth. The diffusivity‐based estimates of CO₂ production as a function of depth were strongly correlated with fine root biomass, indicating that trends in belowground C allocation may be inferred from monitoring and modeling profiles of H₂O and CO₂.     

甘肃临夏盆地的渐新世巨犀化石

描述了 2种巨犀化石 :霍尔果斯准噶尔巨犀 (Dzungariotheriumorgosense)和牙沟副巨犀(新种 ) (Paraceratheriumyagouensesp .nov.)。新种的主要特征是 :个体小 ;上颊齿齿冠高 ,有薄层白垩质覆盖 ;DP2～M1反前刺大 ,原尖后收缩沟明显 ,次尖有深的前收缩沟 ,中谷和后凹中常有附属小柱等。巨犀的演化历史可能比过去想象的更复杂。Indricotherium、Dzungariotherium和Paraceratherium为代表不同进化水平和支系的 3个属 ,不应合并为Paraceratherium一属。牙沟含巨犀化石层位的地质时代为晚渐新世。