Microbial herbivory on the brown tide alga, Aureococcus anophagefferens: results from natural ecosystems, mesocosms and laboratory experiments

Experiments were conducted with natural plankton assemblages from two areas in Great South Bay (GSB) and the Peconic Bays Estuary System, NY, to compare the rates of growth and pelagic grazing mortality of Aureococcus anophagefferens with co-occurring phytoplankton. We hypothesized that A. anophagefferens would experience low mortality rates by microbial herbivores (relative to feeding pressure on other algae) thus providing it with a competitive advantage within the phytoplankton community. In fact, substantial rates of mortality were observed in nearly every experiment in our study. However, mortality rates of A. anophagefferens were less than intrinsic growth rates of the alga during late spring and early summer in Great South Bay, resulting in positive net growth rates for the alga during that period. This timing coincided with the development of a brown tide in this estuary. Similarly, growth rates of the alga also exceeded mortality rates during bloom development in natural plankton assemblages from the Peconic Bays Estuary System held in mesocosms. In contrast to the situation for A. anophagefferens, growth rates of the total phytoplankton assemblage, and another common picoplanktonic phytoplankter (Synechococcus spp.), were frequently less than their respective mortality rates. Mortality rates of A. anophagefferens in both systems were similar to growth rates of the alga during later stages of the bloom. Laboratory studies confirmed that species of phagotrophic protists that consume A. anophagefferens (at least in culture) are present during brown tides but preference for or against the alga appears to be species-specific among phagotrophic protists. We conclude that two scenarios may explain our results: (1) protistan species capable of consuming the brown tide alga were present at low abundances during bloom initiation and thus not able to respond rapidly to increases in the intrinsic growth rate of the alga, or (2) the brown tide alga produced substance(s) that inhibited or retarded protistan grazing activities during the period of bloom initiation. The latter scenario seems less likely given that significant mortality of A. anophagefferens was measured during our field study and mesocosm experiment. However, even a minor reduction in mortality rate due to feeding selectivity among herbivores might result in a mismatch between growth and grazing of A. anophagefferens that could give rise to significant net population growth of this HAB species. Either scenario infers an important role for trophic interactions within the plankton as a factor explaining the development of brown tides in natural ecosystems.     

Effects of algal canopy clearance on plant, fish and macroinvertebrate communities on eastern Tasmanian reefs

Changes in assemblages of plants, macroinvertebrates and fishes on three eastern Tasmanian reefs were monitored over 12 months in replicated control blocks and adjacent 10×12-m blocks cleared of fucoid, laminarian and dictyotalean algae. Removal of canopy-forming plants produced less change to biotic assemblages than reported in studies elsewhere, with the magnitude of change for fish and invertebrate taxa lower than variation between sites and comparable to variation between months.The introduced annual kelp Undaria pinnatifida exhibited the only pronounced response to canopy removal amongst algal taxa, with a fivefold increase in cleared blocks compared to control blocks. Marine reserves are suggested to assist reef communities resist invasion by U. pinnatifida, through an indirect mechanism involving increased predation pressure on sea urchins and reduced formation of urchin barrens that are amenable to U. pinnatifida propagation.Large invertebrates were more associated with turfing algae or the reef substratum than the macroalgal canopy. The herbivorous sea urchin Heliocidaris erythrogramma and abalone Haliotis ruber showed the strongest response to clearing amongst common macroinvertebrate species, with a halving of population numbers. Observed densities of the common monacanthid fish Acanthaluteres vittiger also declined by about 50%. The relatively high level of resistance shown by eastern Tasmanian reef biota to patch disturbance was attributed largely to high diversity and biomass of turfing macroalgae damping effects of canopy clearance.     

Genetic diversity of Darnel (Lolium temulentum L.) in Malo, Ethiopia depends on traditional farming systems

Genetic Diversity of Darnel (Lolium temulentum L.) in Malo, Ethiopia Depends on Traditional Farming Systems. Economic Botany 58(4):568–577, 2004. Darnel (Lolium temulentum L.) is a mimic weed associated with wheat and barley cultivation. Mimic weeds have evolved along with cultivated crops. Human impact on the genetic diversity of agricultural weeds was elucidated using darnel as a model. Three strains in each field in Gaitza village, Malo region, Ethiopia were randomly sampled, and the genetic composition of 120 samples was analyzed using RAPD analysis. Genetic diversity and distances were calculated using Nei’s analysis, and cluster analysis was performed. These results indicated the occurrence of seed migration among the fields and a high genetic diversity of darnel in this region. Crop seed exchange and contamination of crop seeds with darnel seeds lead to the unintended artificial gene flow of darnel. Because darnel seeds and seedlings resemble their associated crop seeds and seedlings, traditional methods of crop cultivation have the unintended consequence of conserving the genetic diversity of darnel.     

Mineralization of soil organic P induced by drying and rewetting as a source of plant-available P in limed and unlimed samples of an acid soil

This study assessed the effects of different farming systems, namely woodlot (WL), alley farming (AL), conventional tillage (CT) and natural fallow (NF) on the variability of organic carbon (OC) content and mean weight diameter (MWD) of a degraded Ferric Acrisol in the sub-humid zone of Ghana. The soils under woodlot accumulated the highest amount of organic carbon (18.6 g kg^–1) with the least spatial variability apparently due to the greater additions of litter and minimum tillage. The conventionally tilled soil had the least OC content (13.1 g kg^–1). Similar to the OC content, the woodlot soils also had the highest aggregate stability (MWD = 1.78 mm) and the least spatial variability. The stability of soil aggregates under the farming systems was greatly influenced by OC content; there was a good correlation between OC and MWD (r > 0.62^**). Correlograms showed that OC and MWD are space dependent. The correlation length for OC under the different farming systems followed the order WL > NF > AL > CT, indicating that WL ensured a greater uniform distribution soil organic matter. The spatial distribution in MWD followed the same trend observed for OC. The MWD in the other farming systems was poorly related from point to point with shorter k-values, suggesting lack of uniformity due to low accumulation of OC. Generally, the woodlot system appeared to be a better, low-input restorer of soil productivity.     

Nitrogen and phosphorus removal rates using small algal turfs grown with dairy manure

Conservation and reuse of nitrogen (N) and phosphorus (P) from animalmanure is increasingly important as producers try to minimize transport ofthesenutrients from farms. An alternative to land spreading is to grow crops ofalgaeon the N and P present in the manure. The general goal of our research is toassess nutrient recovery from animal manure using attached algae. The specificobjective of this study was to evaluate the use of small subsections of algalturfs for determining N and P removal rates by attached algae under differentloading rates of dairy manure. Algae were grown in a laboratory–scalealgal turf scrubber (ATS) operated by recycling wastewater and adding manureeffluent daily. Replicate subsections (0.032 m²) ofalgal turf screens were removed and treated with five different loadings ofanaerobically digested dairy manure containing 5 to 80 mgL^–1 NH₄-N and 1 to 20 mgL^–1 PO₄-P over a 2-h incubationperiod. NH₄-N removal rates were biphasic with a fast initial ratefollowed by a slower rate. Biphasic rates were more pronounced for the lowestloading rates but less so for the higher ones. PO₄-P removal rateswere linear throughout the incubation period for all loading rates. N and Premoval rates increased with increasing loading rate and biomass. Inincubationsusing 1% dairy manure NH₄-N and PO₄-P removal ratesaveraged 0.72 and 0.33 g m^–2d^–1,respectively. These rates were approximately 5 to 8-fold lower than ratesmeasured on laboratory-scale ATS units using undisturbed turfs.     

A self-contained system for the field production of plant recombinant interleukin-10

The production of pharmaceutical proteins in plants is creating a broad spectrum of new high-value traits in traditional crop species. As the production of these recombinant proteins moves from bench to field scale, containment and the presence of unwanted secondary metabolites are significant practical issues. We have developed a hybrid male-sterile low-alkaloid tobacco (MSLA) production platform. Recombinant protein is produced in leaves that are harvested prior to flowering. If considered for direct in vivo mammalian use the low-alkaloid background genotype addresses concerns about nicotine, and male sterility further reduces the risk of gene leakage. We have applied this system to the production of human interleukin-10 (phIL-10), a contra-inflammatory cytokine with potential application in the treatment of inflammatory bowel disease and autoimmune diseases. Transgenic low-alkaloid tobacco lines properly assembled a biologically active phIL-10 homodimer. Hybrids made by crossing a single homozygous high-expressing phIL-10 line with a MSLA female were field tested in a high density production system and harvested after 30 days. Recombinant phIL-10 yields were found to be similar in the hybrids and the homozygous control. MSLA tobacco is a practical, self-contained system for the production of plant recombinant proteins.     

Role of input self-sufficiency in the economic and environmental sustainability of specialised dairy farms

Increasing input self-sufficiency is often viewed as a target to improve sustainability of dairy farms. However, few studies have specifically analysed input self-sufficiency, by including several technical inputs and without only focussing on animal feeding, in order to explore its impact on farm sustainability. To address this gap, our work has three objectives as follows: (1) identifying the structural characteristics required by specialised dairy farms located in the grassland area to be self-sufficient; (2) analysing the relationships between input self-sufficiency, environmental and economic sustainability; and (3) studying how the farms react to a decrease in milk price according to their self-sufficiency degree. Based on farm accounting databases, we categorised 335 Walloon specialised conventional dairy farms into four classes according to their level of input self-sufficiency. To this end, we used as proxy the indicator of economic autonomy – that is, the ratio between costs of inputs related to animal production, crop production and energy use and the total gross product. Classes were then compared using multiple comparison tests and canonical discriminant analysis. A total of 30 organic farms – among which 63% had a high level of economic autonomy – were considered separately and compared with the most autonomous class. We showed that a high degree of economic autonomy is associated, in conventional farms, with a high proportion of permanent grassland in the agricultural area. The most autonomous farms used less input – especially animal feeding – for a same output level, and therefore combined good environmental and economic performances. Our results also underlined that, in a situation of decrease in milk price, the least autonomous farms had more latitude to decrease their input-related costs without decreasing milk production. Their incomes per work unit were, therefore, less impacted by falling prices, but remained lower than those of more autonomous farms. In such a situation, organic farms kept stable incomes, because of a slighter decrease in organic milk price. Our results pave the way to study the role of increasing input self-sufficiency in the transition of dairy farming systems towards sustainability. Further research is required to study a wide range of systems and agro-ecological contexts, as well as to consider the evolution of farm sustainability in the long term.     

A decision-tree model to detect post-calving diseases based on rumination,activity, milk yield,BW and voluntary visits to the milking robot

Early detection of post-calving health problems is critical for dairy operations. Separating sick cows from the herd is important, especially in robotic-milking dairy farms, where searching for a sick cow can disturb the other cows’ routine. The objectives of this study were to develop and apply a behaviour- and performance-based health-detection model to post-calving cows in a robotic-milking dairy farm, with the aim of detecting sick cows based on available commercial sensors. The study was conducted in an Israeli robotic-milking dairy farm with 250 Israeli-Holstein cows. All cows were equipped with rumination- and neck-activity sensors. Milk yield, visits to the milking robot and BW were recorded in the milking robot. A decision-tree model was developed on a calibration data set (historical data of the 10 months before the study) and was validated on the new data set. The decision model generated a probability of being sick for each cow. The model was applied once a week just before the veterinarian performed the weekly routine post-calving health check. The veterinarian’s diagnosis served as a binary reference for the model (healthy–sick). The overall accuracy of the model was 78%, with a specificity of 87% and a sensitivity of 69%, suggesting its practical value.     

Effects of ditch management on caddisfly, dragonfly and amphibian larvae in intensively farmed peat areas

Conservation of natural values within farming practice is growing rapidly within the Netherlands. The focus is primarily on terrestrial flora and fauna such as the vegetation in ditch banks and meadow birds. Knowledge needed to enhance biodiversity in ditches is limited. Therefore, a field study was set up to determine the effects of dredging, ditch cleaning and nutrient supply in the adjacent fields on caddisfly, dragonfly and amphibian larvae in the ditches in a peat area.Two-hundred forty ditches spread over 84 dairy farms were selected to determine the individual effect of several management aspects. Generalised linear modelling was used as a tool to detect the most relevant aspects and to obtain quantitative relations with the chance of the larvae being present.Dredging had an impact on the presence of all larvae types. The type of dredging machine, the dredging period, the water depth and the frequency of dredging can influence the presence of the larvae. The presence of caddisfly larvae was also affected by the cleaning machine and period and by the P supply in the adjacent field. The presence of amphibian larvae was also affected by the cleaning period.Measures that will enhance the presence of the larvae are formulated. Options for water boards and other government authorities to stimulate farmers to take these measures are given.