The application of the entropy-based statistic for genomic association study of QTL

An entropy-based statistic TPE has been proposed for genomic association study for disease-susceptibility locus.The statistic TPE may be directly adopted and/or extended to quantitative-trait locus (QTL)mapping for quantitative traits.In this article,the statistic TPE was extended and applied to quantitative trait for association analysis of QTL by means of selective genotyping.The statistical properties (the type I error rate and the power) were examined under a range of parameters and population-sampling strategies (e.g.,various genetic models,various heritabilities,and various sample-selection threshold values) by simulation studies.The results indicated that the statistic Tee is robust and powerful for genomic association study of QTL.A simulation study based on the haplotype frequencies of 10 single nucleotide polymorphisms (SNPs) of angiotensin-I converting enzyme genes was conducted to evaluate the performance of the statistic TPE for genetic association study.     

Virus-host interactions during hepatitis C virus entry — implications for pathogenesis and novel treatment approaches

Hepatitis C virus (HCV) is a member of the Flaviviridae family and causes acute and chronic hepatitis. Chronic HCV infection may result in severe liver damage including liver cirrhosis and hepatocellular carcinoma. The liver is the primary target organ of HCV, and the hepatocyte is its primary target cell. Attachment of the virus to the cell surface followed by viral entry is the first step in a cascade of interactions between the virus and the target cell that is required for successful entry into the cell and initiation of infection. This step is an important determinant of tissue tropism and pathogenesis; it thus represents a major target for antiviral host cell responses, such as antibody-mediated virus neutralization. Following the development of novel cell culture models for HCV infection our understanding of the HCV entry process and mechanisms of virus neutralization has been markedly advanced. In this review we summarize recent developments in the molecular biology of viral entry and its impact on pathogenesis of HCV infection, development of novel preventive and therapeutic antiviral strategies.      

Interference of hepatitis B virus with cellular signaling

The presence of hepatitis B virus (HBV) proteins leads to changes in the cellular gene expression. As a consequence, the cellular signaling processes are influenced by the actions of HBV proteins. It has been shown that HBV nucleocapsid protein and the amino-terminal part of polymerase termed as terminal protein (TP) could inhibit interferon signaling. Further, the global gene expression profiles differ in hepatoma cells with and without HBV gene expression and replication. The expression of interferon (IFN) stimulated genes (ISGs) was differently regulated in cells with HBV replication and could be modulated by antiviral treatments. The HBV TP has been found to modulate the ISG expression and enhance the HBV replication. The modulation of the cellular signaling processes by HBV may have significant implications for pathogenesis.     

鄱阳湖黄鳝的生长特征

以基舌骨和脊椎骨作为年龄鉴定的材料,研究了鄱阳湖黄鳝(Monopterus albus)种群的生长特征.结果表明,种群的年龄结构分别为:雌性1～5龄,雄性2～6龄,2～5龄为黄鳝性别的过渡期(间性).2～4龄为优势年龄组,占渔获物的89.75%,相对应的体长为30～50 cm,体重为30～120 g.体长(L)与体重(W)的关系为:W=0.000 4L3.2601(♀);W=0.001 4L2.9008(∮).按生长指标值分析,阶段生长可以明显地划分为两个时期,即2龄前的生长迅速期和2龄后的生长稳定期.拟合的Von Bertalanffy生长参数分别为雌性L∞=78.5 Cm,k=0.174 02/y,t0=-1.203 2 Y,W∞:602.01 g;雄性L∞=102.3 cm,k=0.118 45/y,t0=-1.310 1 Y,W-=947.32 g;生长特征参数分别为ψ=3.030 3(♀)和ψ=3.093 4(∮);雌雄个体生长差异显著.     

柳属的分支系统学分析

基于61个广义的形态学性状,以杨属为外类群对柳属进行了分支系统学分析.经简约性分析,得到了21个同等简约的分支树,其严格一致树支持柳属为一个自然的分类群,但不支持将钻天柳属和心叶柳属从柳属中划分出去独立成属,也不支持对柳属进行属级水平上的细分,后两个结果得到孢粉学和分子系统学研究的支持.柳亚属为一个单系分支,皱纹柳亚属和黄花柳亚属也形成了一个单系分支.根据本研究的结果,建议将柳属划分为钻天柳亚属、柳亚属及黄花柳亚属3个亚属.由于较低的靴带支持率,其系统发育关系难于探讨.鉴于分支分析的一致性指数、保持性指数、各分支内部的支持率均不高,柳属的属下分类系统的划分有待进一步的研究.     

小麦黄色素合成途径中Psy基因的克隆及分子特性

对普通小麦(Ttiticum aestivum)黄色素(YP)合成途径中的首要限速酶——八氢番茄红素合成酶(Psy)基因进行克隆和测序,并和玉米Psy基因进行序列比对。结果表明,在高和低YP含量小麦品种中均扩增出一条长1192bp的Psy基因片段,该片段包含一条可编码78个氨基酸的小麦Psy基因的外显子,与玉米Psy基因第4外显子的核苷酸序列同源率为80.74,同源区域内有47个SNPs,但仅11个SNPs导致氨基酸编码序列的改变,二者氨基酸序列的同源率达85.89,推测Psy基因在不同物种中的表达具有较高的保守性。BLAST聚类分析表明,禾谷类植物Psy基因的分类与物种的亲缘关系存在明显的相关性,小麦Psy基因在系统进化中比禾谷类其他植物更为高级。     

运用资料分析进行"生物进化的历程"教学

"生物进化的历程"是人教版8年级<生物学>下册第7单元第3章的一节内容.生物的进化是一个漫长的历程.要想在场地、时间、条件、环境有限的课堂内贯彻新课程理念,开展探究性学习,采用资料分析的方式是最理想的,它同样能让学生学习探究方法,体验探究过程,并学到相关的基础知识.     

对一道题的求解

笔者就一道习题的解答,介绍了3次探究求解过程:实验求解:着重解决天平哪边将会上升的现象.数学求解:从数学上寻求左侧上升现象的理论依据.通过相关量的假设,两侧有关质量大小的比较、K值的求定,借助代数运算的方式推导出左侧质量小于右侧质量.再次求解:解决天平左侧上升的生理原因.经问题转变及影响质量因素的分析、判断推理出左侧上升的主要原因是蒸腾作用,并通过实验验证了判断推理的正确性.     

"DNA是主要的遗传物质"一节几个疑难问题解答

选择了"DNA是主要的遗传物质"一节在教学过程中常见的几个疑难问题,简要进行了分析并解答.