云杉碳氮化学计量比对土壤水分和氮有效性的响应

以西南亚高山针叶林优势种——粗枝云杉(Picea asperata)为研究对象,探究不同土壤水分状况和氮添加下云杉碳氮化学计量比的变化及其响应过程。采用两因素(水分×氮素)随机区组实验,设置5个土壤水分梯度和3个氮添加浓度,其中土壤水分梯度分别是土壤田间持水量的40%(W1)、50%(W2)、60%(W3)、80%(W4)和100%(W5),氮添加浓度分别为0(N0)、20(N1)、40(N2)gNm~(-2) a~(-1)。结果表明:(1)土壤水分和氮添加显著影响了云杉碳氮化学计量比(P0.05),具体为:云杉植株和器官碳氮比在N0W4处理下最大值,随土壤水分有效性的降低而减小,随氮添加浓度的增加而降低。(2)随土壤水分有效性的降低,根和叶的碳含量显著升高(P0.05),茎和叶的碳含量随着氮添加浓度的增加而降低。此外,土壤水分有效性的降低显著提高了根和茎的氮含量(P0.05),各器官的氮含量随着氮添加浓度的增加而增加。在相同水分和氮添加浓度处理下表现为碳含量:叶茎根,氮含量:叶根茎。(3)云杉净光合速率随土壤水分有效性的降低先升高后降低,随氮添加浓度增加而增加,在N2W4达到最大。(4)根对NH~+_4和NO~-_3的净吸收速率随土壤水分有效性的降低而减小,随氮添加浓度的增加而显著增加(P0.05)。此外,根对NH~+_4的净吸收速率与土壤有效氮含量呈显著负相关关系(P0.05)。本研究表明,土壤水分和氮添加影响了云杉的碳同化和氮吸收过程,改变植物的碳、氮分配策略和养分利用效率,从而导致碳氮比的变化。     

Culture Independent Diversity of Bacterial Communities Indigenous to Lower Altitude at Laohugou Glacial Environment

Abstract

High-throughput sequencing approach of the 16S rRNA gene was employed to evaluate the bacterial diversity inhabit in melted water, snow, soil, and rocks samples at the lower altitudes of the Laohugou glacial environment. Bioinformatics tools were used to process millions of Illumina reads for alpha and beta diversities of bacterial communities. The diversity indices such as Chao, Shannon, and Simpson were different in the collected samples and solid samples (soil and rocks) showed higher taxon richness and evenness. Taxonomic diversity was unexpectedly higher and the major portion of sequences was assigned to Proteobacteria, Actinobacteria, and Acidobacteria. Higher variation in community structure was reported at the class level and Alphaproteobacteria was dominant. The solid niches were occupied by a higher number of phyla compared with liquid. The physicochemical variables acted as spatial gradients and associated with the bacterial structural communities of the glacial ecosystem. Findings showed that both Proteobacteria and Actinobacteria in solid samples influenced the bacterial community structure in downstream liquid samples. Interestingly, the metagenomic biomarkers were higher in liquid samples. This study provides precious datasets to understand the bacterial community in a better way under the influence of spatial, physical and environmental factors.     

繁殖期雌性蓝狐性激素检测与 性器官组织学观察

为了研究繁殖期雌性蓝狐(Alopexlagopus)类固醇激素含量、发情表现与性器官组织学结构之间的关系,于2019年选取繁殖期不同发情状况的雌性蓝狐,共18只,分为典型发情、非典型发情和不发情3组。通过无损伤取样法采集粪便与尿液并通过放射免疫法(RIA)测定孕酮(P)和雌二醇(E2)的含量;每组选取1只在发情并输精的当天取卵巢和子宫,进行组织学观察。结果显示,所测定典型发情、非典型发情、不发情蓝狐类固醇激素水平,雌二醇在尿液中的含量显著高于粪便,且在不同组间差异明显,尤其在典型发情组更高,达到(11 065.17±546.76)ng/L;孕酮含量尿液与粪样差异不大,孕酮含量在典型发情雌性蓝狐粪便与尿液含量差异不显著,但在不发情雌性蓝狐中差异显著,为(16.61±0.63)μg/L。粪尿测定孕酮和雌二醇激素含量与三组不同情况的发情表现相比相关性显著。粪、尿作为类固醇激素检测样本,虽然含量有差异,但变化趋势一致,都可使用。卵巢与子宫在典型发情雌性蓝狐中体积较大,卵巢可见各级卵泡和多个黄体,子宫黏膜上皮为柱状上皮,排列紧密,固有层内可见大量腺体;非典型发情雌性蓝狐卵巢、子宫发育状况与典型发情雌性蓝狐相类似;不发情雌性蓝狐卵巢、子宫呈静息状态,卵巢中卵泡多处于闭锁状态,无卵母细胞,也无黄体,固有层间质细胞及肌层肌细胞排列更为紧密。说明检测孕酮和雌二醇激素的含量,可以准确判定蓝狐发情的状态。     

Identifying Primate ACE2 Variants That Confer Resistance to SARS-CoV-2

SARS-CoV-2 infects humans through the binding of viral S-protein (spike protein) to human angiotensin I converting enzyme 2 (ACE2). The structure of the ACE2-S-protein complex has been deciphered and we focused on the 27 ACE2 residues that bind to S-protein. From human sequence databases, we identified nine ACE2 variants at ACE2–S-protein binding sites. We used both experimental assays and protein structure analysis to evaluate the effect of each variant on the binding affinity of ACE2 to S-protein. We found one variant causing complete binding disruption, two and three variants, respectively, strongly and mildly reducing the binding affinity, and two variants strongly enhancing the binding affinity. We then collected the ACE2 gene sequences from 57 nonhuman primates. Among the 6 apes and 20 Old World monkeys (OWMs) studied, we found no new variants. In contrast, all 11 New World monkeys (NWMs) studied share four variants each causing a strong reduction in binding affinity, the Philippine tarsier also possesses three such variants, and 18 of the 19 prosimian species studied share one variant causing a strong reduction in binding affinity. Moreover, one OWM and three prosimian variants increased binding affinity by >50%. Based on these findings, we proposed that the common ancestor of primates was strongly resistant to and that of NWMs was completely resistant to SARS-CoV-2 and so is the Philippine tarsier, whereas apes and OWMs, like most humans, are susceptible. This study increases our understanding of the differences in susceptibility to SARS-CoV-2 infection among primates.     

青藏高原东部高寒灌丛生物量分配对模拟增温的响应

植物生物量分配特征的变化反映了不同环境条件下植物的适应策略,全球气候变暖正在改变青藏高原高寒生态系统植被动态和生物量分配格局。然而,到目前为止,有关青藏高原高寒灌丛生物量分配特征对气候变暖的响应研究较少。为了探究气候变暖对高寒灌丛生物量分配的影响,以青藏高原东部典型的窄叶鲜卑花高寒灌丛为研究对象,分析了高寒灌丛灌木层、草本层和群落水平生物量分配特征对开顶式生长室（OTC）模拟增温的响应。研究结果表明：整个生长季节,模拟增温使空气温度和表层土壤温度分别升高0.6℃和1.2℃,使表层土壤水分含量下降2.7%。模拟增温使草本层和群落地上生物量显著增加57.8%和7.2%,使灌木层、草本层和群落根系生物量显著增加42.5%、105.6%和45.6%。然而,模拟增温没有显著影响灌木层地上生物量。同时,模拟增温使灌木层、草本层和群落总生物量显著增加25.6%、85.7%和28.4%,使灌木层、草本层和群落根冠比显著增加33.2%、30.4%和36.0%。由此可见,模拟增温在促进高寒灌丛生物量生产的同时将显著提高向地下根系部分的分配比例。Pearson相关分析表明,高寒灌丛生物量分配与空气温度、土壤温度和土壤硝态氮含量呈显著正相关关系;多元线性回归分析结果也表明,空气温度、土壤温度和土壤硝态氮含量解释了高寒灌丛生物量分配变异的50.8%以上。这些结果表明,青藏高原东部高寒灌丛植被能够通过调节生物量分配模式应对未来气候变暖。     

Determining the appropriate pretreatment procedures and the utility of liver tissue for bulk stable isotope (δ13C and δ15N) studies in sharks

Stable-isotope analysis (SIA) provides a valuable tool to address complex questions pertaining to elasmobranch ecology. Liver, a metabolically active, high turnover tissue (~166 days for 95% turnover), has the potential to reveal novel insights into recent feeding/movement behaviours of this diverse group. To date, limited work has used this tissue, but ecological application of SIA in liver requires consideration of tissue preparation techniques given the potential for high concentrations of urea and lipid that could bias δ¹³C and δ¹⁵N values (i.e., result in artificially lower δ¹³C and δ¹⁵N values). Here we investigated the effectiveness of (a) deionized water washing (WW) for urea removal from liver tissue and (b) chloroform-methanol for extraction of lipids from this lipid rich tissue. We then (a) established C:N thresholds for deriving ecologically relevant liver isotopic values given complications of removing all lipid and (b) undertook a preliminary comparison of δ¹³C values between tissue pairs (muscle and liver) to test if observed isotopic differences correlated with known movement behaviour. Tests were conducted on four large shark species: the dusky (DUS, Carcharhinus obscurus), sand tiger (RAG, Carcharias taurus), scalloped hammerhead (SCA, Sphyrna lewini) and white shark (GRE, Carcharodon carcharias). There was no significant difference in δ¹⁵N values between lipid-extracted (LE) liver and lipid-extracted/water washed (WW) treatments, however, WW resulted in significant increases in %N, δ¹³C and %C. Following lipid extraction (repeated three times), some samples were still biased by lipids. Our species-specific “C:N thresholds” provide a method to derive ecologically viable isotope data given the complexities of this lipid rich tissue (C:N thresholds of 4.0, 3.6, 4.7 and 3.9 for DUS, RAG, SCA and GRE liver_LEWW tissue, respectively). The preliminary comparison of C:N threshold corrected liver and muscle δ¹³C values corresponded with movement/habitat behaviours for each shark; minor differences in δ¹³C values were observed for known regional movements of DUS and RAG (δ¹³C_Diffs = 0.24 ± 0.99‰ and 0.57 ± 0.38‰, respectively), while SCA and GRE showed greater differences (1.24 ± 0.63‰ and 1.08 ± 0.71‰, respectively) correlated to large-scale movements between temperate/tropical and pelagic/coastal environments. These data provide an approach for the successful application of liver δ¹³C and δ¹⁵N values to examine elasmobranch ecology.     

Advances in approaches to seagrass restoration in Australia

Three case studies involving two temperate Australian seagrass species – Pondweed (Ruppia tuberosa) and Ribbon Weed (Posidonia australis) – highlight different approaches to their restoration. Seeds and rhizomes were used in three collaborative programmes to promote new approaches to scale up restoration outcomes.     

Predictive markers of safety and immunogenicity of adjuvanted vaccines

Vaccination represents one of the greatest public health triumphs; in part due to the effect of adjuvants that have been included in vaccine preparations to boost the immune responses through different mechanisms. Although a variety of novel adjuvants have been under development, only a limited number have been approved by regulatory authorities for human vaccines. This report reflects the conclusions of a group of scientists from academia, regulatory agencies and industry who attended a conference on the current state of the art in the adjuvant field. Held at the U.S. Pharmacopeial Convention (USP) in Rockville, Maryland, USA, from 18 to 19 April 2013 and organized by the International Association for Biologicals (IABS), the conference focused particularly on the future development of effective adjuvants and adjuvanted vaccines and on overcoming major hurdles, such as safety and immunogenicity assessment, as well as regulatory scrutiny. More information on the conference output can be found on the IABS website, http://www.iabs.org/.     

Heterospecific courtship,minority effects and niche separation between cryptic butterfly species

Species interacting in varied ecological conditions often evolve in different directions in different local populations. The butterflies of the cryptic Leptidea complex are sympatrically distributed in different combinations across their Eurasian range. Interestingly, the same species is a habitat generalist in some regions and a habitat specialist in others, where a sibling species has the habitat generalist role. Previous studies suggest that this geographically variable niche divergence is generated by local processes in different contact zones. By varying the absolute and relative densities of Leptidea sinapis and Leptidea juvernica in large outdoor cages, we show that female mating success is unaffected by conspecific density, but strongly negatively affected by the density of the other species. Whereas 80% of the females mated when a conspecific couple was alone in a cage, less than 10% mated when the single couple shared the cage with five pairs of the other species. The heterospecific courtships can thus affect the population fitness, and for the species in the local minority, the suitability of a habitat is likely to depend on the presence or absence of the locally interacting species. If the local relative abundance of the different species depends on the colonization order, priority effects might determine the ecological roles of interacting species in this system.     

Seasonal changes in entrainment cues for the circadian rhythm of the supratidal amphipod Talorchestia longicornis

The supratidal amphipod Talorchestia longicornis Say has a circadian rhythm in activity, in which it is active on the substrate surface at night and inactive in burrows during the day. The present study determined: (1) the circadian rhythms in individual versus groups of amphipods; (2) the range of temperature cycles that entrain the circadian rhythm; (3) entrainment by high-temperature cycles versus light?:?dark cycles, and (4) seasonal substrate temperature cycles. The circadian rhythm was determined by monitoring temporal changes in surface activity using a video system. Individual and groups of amphipods have similar circadian rhythms. Entrainment occurred only to temperature cycles that included temperatures below 20°C (10–20, 15–20, 17–19, 15–25°C) but not to temperatures above 20°C (20–25, 20–30°C), and required only a 2°C temperature cycle (17–19°C). Diel substrate temperatures were above 20°C in the summer and below 20°C during the winter. Upon simultaneous exposure to a diel high-temperature cycle (20–30°C) and a light?:?dark cycle phased differently, amphipods entrained to the light?:?dark cycle. Past studies found that a temperature cycle below 20°C overrode the light?:?dark cycle for entrainment. The functional significance of this change in entrainment cues may be that while buried during the winter, the activity rhythm remains in phase with the day?:?night cycle by the substrate temperature cycles. During the summer, T. longicornis switches to the light?:?dark cycle for entrainment, perhaps as a mechanism to phase activity precisely to the short summer nights.