PectinaseAspergillus sp. polygalacturonase: Multiplicity, divergence, and structural patterns linking fungal, bacterial, and plant polygalacturonases

Nine forms ofAspergillus sp. polygalacturonase were purified from a commercial preparation of pectinase Rohament P using chromatographies and chromatofocusing. Individual forms differ in isoelectric point, and at least five differ in structure; whereas molecular masses and enzymatic properties are largely identical. Four forms with freea-amino groups have identical start positions but internal amino acid replacements. Therefore, the multiplicity is derived from true heterogeneities and not from N-terminal truncations. Peptide analysis of the major polygalacturonase reveals large variations toward the enzyme from otherAspergillus species (72–75% residue differences, depending on species) but additional similarities with the enzyme from bacterial and plant sources (only 66–71% residue differences toward theErwinia, tomato, and peach enzymes). Combined with previous data, these facts show polygalacturonase to exhibit extensive multiplicity and much variability, but also unexpected similarities between distantly related forms with conserved functional properties     

Les métapodes d'Equus sensu lato (Mammalia,Périssodactyla)

Biometrical study of the metapodials of modern wild species (E. grevyi, E. burchelli boehmi, E. zebra hartmannae, E. africanus, E. hemionus and E. przewalskii) and some fossil forms (E. stenonis vireti and cf. vireti from the Villafranchian of France and Spain; E. tabeti and E. mauritanicus from the Lower and Middle Pleistocene of Northern Africa; E. mosbachensis from the Middle Pleistocene of Germany). Classical functional and evolutive interpretations of some characters are discussed: development of the distal keel, of the distal supra-articular and articular widths, of the proximal widths and antero-posterior diameters.     

Map positions of 69 Arabidopsis thaliana genes of all known nuclear encoded constituent polypeptides and various regulatory factors of the photosynthetic membrane: a case study.

Landsberg erecta x Columbia F8 recombinant inbred lines of Arabidopsis thaliana, arrayed BAC clones covering most of the genome, and databank sequence information were used to map the positions of 69 genes in the genome of A. thaliana. These genes encode all known constituents of the photosynthetic thylakoid membrane, some regulatory factors involved in its biogenesis, and the RNA polymerases of nuclear origin that operate in chloroplasts and mitochondria. Designations of novel genes are proposed. The data of these three approaches are generally consistent, although ambiguities have been noted for some genome segments and with gene duplications. For thylakoid multi-subunit structures, no positional clustering of genes has been found, not even for genes encoding different subunits of the same membrane complex. The genes of the lhc superfamily encoding antenna apoproteins and their relatives are a particularly intriguing example. The lack of positional clustering is consistent with phylogenetically independent gene translocations from the plastid (endosymbiont) to the nucleus. This raises the basic question of how independently translocated genes which acquired different promoter sequences and transit peptides were functionally integrated into common signal transduction chains.     

Gene sequence analysis and properties of EGC, a family E (9) endoglucanase from Fibrobacter succinogenes BL2

Abstract β-Glucosidase in Aspergillus nídulans was found to be both intracellular and extracellular. The intracellular β-glucosidase was synthesized after the exhaustion of carbon source in the medium. The extracellular enzyme appeared with autolysis of the mycelium. Biosynthesis of β-glucosidase was not induced by various carbohydrates but repressed to varying extents in the presence of glucose, glycerol, and 2-deoxyglucose. This repression was not relieved by addition of cAMP. The repression was relieved much more by mutations in the creA gene than by one in the creC gene. Thus, β-glucosidase synthesis in A. nidulans is subject to carbon catabolite repression.     

Resistance to infection and activation of the monocyto-macrophage system caused byBacillus firmus and its fractions

Crude lipids isolated fromBacillus firmus, but not from other bacilli, were previously found to induce significant resistance againstListeria monocytogenes infection in mice. In this study, formaldehyde-and heat-killed bacterins of eightBacillus species and some cellular fractions ofB. firmus were prepared and tested for further immunomodulatory activities. Crude lipids, their aqueous extract, LTA, Protodyne and Pex-residue preparations exhibited a strong anti-infection activity, whereas Pextract, P40 and all bacterins tested had no effect. Formaldehyde-killed bacterins, live bacteria and the P40 preparation of bothB. firmus strains, as well as bacterins of bothB. subtilis strains, induced pronounced splenomegaly in mice. Peptidoglycan and Pex-residue induced significant depression of cytochrome P-450 in mouse liver microsomes after application of 0.1 mg per mouse. Optimal conditions for obtaining a bacterial suspension exhibiting these immunomodulatory properties were elaborated.     

Effect ofBacillus firmus and other sporulating aerobic microorganisms onin vitro stimulation of human lymphocytes. A comparative study

B. firmus activates human peripheral blood lymphocytesin vitro. Bacteria inactivated by heat or by formaldehyde were about equally effective, stimulating the blastic transformation of lymphocytes at doses of 10–200 mg/L and Ig formation in the culture at 10–500 mg/L. The action of formaldehyde treatedB. firmus was compared with that of analogously inactivatedB. subtilis, B. polymyxa, B. coagulans, B. megaterium, B. pumilus, B. cereus andB. lentus at a concentration of 100 mg/L. All these bacilli midly stimulated blastic transformation and most of them substantially stimulated Ig formation, butB. firmus was the most efficient in stimulating the formation of Ig of all classes, in particular IgM and IgA. Its effect on Ig formation was comparable with that of PWM and was unusually high as compared with that of other bacteria.B. firmus is apparently a strong polyclonal activator of B lymphocytes. Its cells or their components could be potentially used for modulating immune reactions. The work was supported by grant no. 0679-1 from theMinistry of Health of the Czech Republic.     

Modeling in Structure Analysis of Vanadyl Phosphate Intercalated with 1-Alkanols

Molecular mechanics simulations supported by X-ray powder diffraction measurements have been used to investigate the structure of vanadyl phosphate intercalated with 1-alkanols C_nH_2n+1OH for n = 2, 3, 4. Modeling revealed the specific features and differences in arrangement of alkanol molecules with different chain length, depending on the relation between the parameters of active sites network and size of guest molecules. This result enabled us to explain the irregularities in dependence of basal spacing on the chain length. The comparison of experimental d_exp and calculated d_calc values of basal spacing showed the good agreement of modeling with x-ray powder diffraction. While we obtained d_calc(Univ) = 13.05 Å for vanadyl phosphate-ethanol using the Universal force field (d_exp=13.17 Å), for vanadyl phosphate-propanol and vanadyl phosphate-butanol better agreement with experiment was obtained using the Tripos force field. In the case of vanadyl phosphate-propanol the calculated basal spacing d_calc(Tripos) = 14.49 Å, compared with an experimental value of d_exp=14.36 Å. For vanadyl phosphate-butanol d_calc(Tripos) = 17.71 Å and d_exp=17.90 Å.