单细胞测序方法研究进展

近年来,高通量测序技术(Next-generation sequencing,NGS)快速发展,已广泛应用于生命科学各个领域,但传统的混合细胞测序(Bulk cell sequencing)检测的是细胞群体的总平均反应,无法反应每个细胞的真实情况,这会影响研究者对细胞功能认知的准确性。单细胞测序技术(Single cell sequencing,sc-Seq)的出现,从一定程度上解决了传统测序固有的缺陷。单细胞测序是针对单个细胞的RNA或DNA进行测序,能够准确测出单个细胞的基因结构和表达状态,从而分析相同表型细胞的异质性。本文首先介绍单细胞测序的原理、测序类型和测序平台,有助于理解单细胞测序和在进行科研项目时设计合适的项目方案。进一步介绍单细胞转录组测序的分析流程和各种常用的分析工具或软件,并重点阐述单细胞转录组测序分析中的细胞聚类和拟时序分析的原理和研究进展,为进行单细胞转录组测序数据分析提供参考。最后,本文简述了单细胞测序研究热度、单细胞测序的应用、挑战和展望等,有助于更全面地认识单细胞测序。     

脂肪间充质干细胞来源外泌体的功能

外泌体是细胞外膜质纳米囊泡,将蛋白质、核酸(DNA和RNA)转运到靶细胞中,介导局部和系统的细胞间通信,从而改变受体细胞的行为.这些小泡在许多生物功能中发挥重要作用,如脂肪合成、免疫调节、神经再生和肿瘤调节等.脂肪间充质干细胞目前被认为是细胞治疗和再生医学领域中一种功能丰富的工具,可产生和分泌多种外泌体,继承细胞的多种...     

甲亢甲低患者肝纤维化指标检测的临床意义分析

目的:探讨甲状腺功能亢进(甲亢)、甲状腺功能减低(甲低)与肝纤维化指标的关系及其可能的机制。方法:采用放射免疫分析法(R1A)检测57例甲亢患者、43例甲低患者、39例甲亢治疗后甲状腺激素正常者和50例健康成人的血清Ⅳ型胶原(1V-C)、Ⅲ型前胶原(PCⅢ)、透明质酸(HA)、层粘连蛋白(LN)、T3、T4、FT3、FT4、TSH、TGA、TMA含量。结果:甲亢患者组血清中1V-C、PCⅢ含量比正常对照组及甲低患者组显著性增高(P<0.05);治疗后甲状腺激素下降,1V-C、PCⅢ含量也随之下降(与治疗前比较P<0.01);HA、LN在四组中无显著性差异(P>0.05),在甲亢治疗前后无显著性差异(P>0.05)。各项肝纤维化指标与TGA、TMA的阳性率无关。结论:甲亢患者可有不同程度的肝功能损害,血清中甲状腺激素水平增高时,1V-C、PCⅢ水平也增高,在用1V-C、PCⅢ判断肝纤维化时应注意有无甲状腺疾病特别是甲亢。未发现HA、LN含量与甲状腺激素水平的关系。     

中国宽漠甲属分类研究(鞘翅目,拟步甲科)

对中国宽漠甲属Sternoplax Frivaldszky进行了分类整理,共计4亚属10种,含2新种:双脊宽漠甲Sternoplax bicarinata sp.nov.和隆脊宽漠甲Sternoplax lineola sp.nov.;给出中国已知种检索表及其名录,绘制了新种的形态特征图.模式标本保存于河北大学博物馆.     

医学院校新生适应性问题的研究

目的:在教育理论的指导下,通过问卷调查的形式对一年级学生的生活、学习、心理健康状况等方面的适应性问题进行调研。方法:采用随机抽样的原则,以抽到的班级所有符合条件的大学新生作为调查对象。采用自制的一般人口学特征问卷、高考志愿填报情况调查表、教学软硬件建设满意度调查表、目前学习状况及未来就业去向调查表、症状自评量表对46名大学新生进行调查。结果:调查班级学生中,多数学生来自农村家庭;与"70版、80后"相比,"90后"学生在职业选择方面具有更多的自主选择权;对学校在软硬条件方面亦提出更高的要求;受限于近期个人目标,缺乏长远人生目标,可持续发展能力差。心理问题阳性检出率为24%,排名在前4位的心理健康问题依次是:强迫、抑郁、焦虑、躯体化,男女生表现个有不同。结论:传统教育思维仍试图在极短时间里完成适应性教育工作,致使抽象理论与学生现实需求相脱节。陌生的环境、迥然不同的学习方式、全方位转变的人际关系使得新生心理问题出现叠加性、多重性的特点。相关部门应改变适应教育模式,建立新生适应教育活动的长期反馈机制和评估体系,才能更好的服务于新生教育工作。     

中国洞穴蜘蛛多样性及其对洞穴环境的适应

对中国洞穴蜘蛛的多样性、地理分布信息进行了详细的闸述.初步探讨了洞穴蜘蛛对洞穴环境的适应性特征及其进化机制.我国洞穴蜘蛛目前已知16科27属80种,其巾暗蛛科、弱蛛科、泰莱蛛科和巨蟹蛛科物种最多;在属级阶元上,以弱蛛属Leptoneta14种、泰莱蛛属Telema lO种、龙角蛛属Draamar如和巾遁蛛属Sinopoda各9种,宽隙蛛属Platocoelotes 8种居多.我国洞穴蜘蛛主要集中分布在贵卅、海南、云南、北京、浙江、广西等喀斯特洞穴较为密集地区,在河北、河南、湖北和湖南也有部分报道.在不同地区分布的洞穴蜘蛛类群或优势类群及区系成分等都存在较大差异.洞穴蜘蛛中约有20%～30%的种类凶为长期生活在黑暗无光、食物匮乏以及缺乏温度和光周期的季节调节等特殊环境,出现了一些地表生境蜘蛛类群中所没有的刘洞穴环境的适应性特征,如缺乏体色素、眼退化共至无眼、附肢延长、全身牛有很多具较敏锐触觉和嗅觉功能的感觉毛、繁殖无季节性、耗氧量降低而新陈代谢缓慢、代谢率降低、产牛的后代少、单个卵粒包含更多的营养等.     

Abnormal Epidermal Keratinization in the repeated epilation mutant mouse

Repeated epilation (Er) is a radiation-induced, autosomal, incomplete dominant mutation in mice which is expressed in heterozygotes but is lethal in the homozygous condition. Many effects of the mutation occur in skin: the epidermis in Er/Er mice is adhesive (oral and nasal orifices fuse, limbs adhere to the body wall), hyperplastic, and fails to undergo terminal differentiation. Skin from fetal +/+, Er/+ and Er/Er mice at ages pre- and postkeratinization examined by light, scanning, and transmission electron microscopy showed marked abnormalities in tissue architecture, differentiation, and cell structure; light and dark basal epidermal cells were separated by wide intercellular spaces, joined by few desmosomes, and contained phagolysomes. The numbers of spinous, granular, and superficial layers were highly variable within any given region and among various regions of the body. In some areas, 2-8 layers of granular cells, containing large or diminutive keratohyalin granules, extended to the epidermal surface; in others, the granular layers were covered by several layers of partially keratinized or nonkeratinized cells. In rare instances, a single or small group of cornified cells was present among the granular layers but was not associated with the epidermal surface. Both the granular and nonkeratinized/partially keratinized upper epidermal layers Er/Er skin gave positive immunofluorescence with antiserum to the histidine-rich, basic protein, filaggrin. Proteins in epidermal extracts from +/+, Er/+ and Er/Er mice were separated and identified by radio- and immunolabeling techniques. The Er/Er extract was missing a 26.5- kdalton protein and had an altered ratio of bands in the keratin region. The 26.5-kdalton band was histidine-rich and cross-reacted with the antiserum to rat filaggrin. Several high molecular weight bands present in both Er/Er and +/+ extracts also reacted with the antiserum. These are presumed to be the precursors of filaggrin and to account for the immunofluorescence om Er/Er epidermis even though the product protein is absent. The morphologic and biochemical data indicated that the genetic defect has a general and profound influence on epidermal differentiation, including alteration of two proteins (filaggrin and keratin) important in normal terminal differentiation, tissue architecture, and cytology. Identification of epidermal abnormalities at early stages of development (prekeratinization) and defective structure of other tissues and gross anatomy suggest that the mutation is responsible for a defect in same regulatory step important in many processes of differentiation and development.     

Isolation and characterization of the major form of polyprenyl-phospho- mannose from Mycobacterium smegmatis

We isolated from the endogenous polyprenyl-phospho-sugar pool of Mycobacterium smegmatis two mannose-containing compounds, i.e., a partially saturated C35-octahydroheptaprenyl-P-mannose and a fully unsaturated C50-decaprenyl-P-mannose. The relative amount of C35- polyprenyl-P-mannose in mycobacterial cells was comparable to that of decaprenyl- P-pentoses and, at least, an order of magnitude higher than that of C50-decaprenyl-P-mannose. The major form of mycobacterial polyprenyl-P-mannose was structurally characterized by combined gas chromatography-mass spectrometry, fast-atom bombardment tandem mass spectrometry and proton-nuclear magnetic resonance spectroscopy as beta- d-mannopyranosyl-monophospho-(C35)octahydroheptapren ol of which all three isoprene units have Z ( cis ) configuration. The differences in the structure and cellular concentrations of the mycobacterial mannosyl- P-polyprenols reflect distinct biochemical pathways of the two compounds and suggest the existence of specific GDP-Man:polyprenyl-P mannosyltransferases (synthetases) able to distinguish between C35- octahydroheptaprenyl- and C50-decaprenyl- phosphates of mycobacteria. Since the 6'-O-mycoloylated form of C35-octahydroheptaprenyl-P-mannose isolated from M. smegmatis is apparently involved in mycolate rather than mannosyl transfer reactions, we speculate that a catabolic pathway responsible for degradation of C35-P-mannose and recycling C35- octahydroheptaprenyl phosphate might exist in mycobacteria.      

吸氧预处理对大鼠脑缺血再灌注损伤的保护作用

目的探讨吸氧预处理对大鼠脑缺血再灌注损伤的保护作用。方法通过大鼠局灶脑缺血再灌注损伤模型,采用SOD、MDA测定、电镜及神经行为学检查的方法,观察吸氧预处理对大鼠脑缺血再灌注损伤后SOD、MDA、神经行为学评分及脑组织病理变化。结果吸氧预处理组SOD活力高于对照组(P<0.05),MDA含量、神经行为学评分均低于对照组(P<0.05),脑组织超微结构损伤均减轻。结论吸氧预处理对大鼠脑缺血再灌注损伤有保护作用。