Development of rRNA-targeted probes for detection of Prorocentrum micans (Dinophyceae) using whole cell in situ hybridization

Prorocentrum is a common dinoflagellate genus along the Chinese seacoast, which frequently causes harmful algal blooms. Efforts to understand and prevent blooms caused by these harmful species require the development of methods for rapid and precise identification and quantification so that an adequate early warning of harmful algal blooms may be given. Here, we report the development and application of rRNA-targeted oligonucleotide probes for fluorescence in situ hybridization (FISH) to aid in the detection of Prorocentrum micans. The hypervariable D1–D2 regions of a large subunit rDNA of a strain isolated from East China Sea identified as P. micans were first sequenced to design species-specific probes. Analysis of sequences identified as P. micans and deposited in GenBank revealed significant base differences among them and phylogenetic analyses revealed multiple clades within the taxon P. micans. Thus, it is likely that more than one taxonomic and genetically distinct entity has been identified as P. micans, if not misidentified. A series of probes were identified to one of these clades and tested for their specificity. Second, whole cell in situ hybridization procedures were established and the optimal probes were screened among the candidate probes. Next, cross-reactivity was performed to test the specificity of the probes and the detection reliability under various culture conditions, including different nutrient levels, temperatures, and light intensities. Finally, an improved protocol for natural samples was applied to the field material. The designed rRNA-targeted probe was specific, showing no cross-reactivity with other microalgae. The optimized detection protocol could be completed within 1.5 h. All target cells were speculated to be identified during all stages of their whole growth cycle under different culture conditions because the difference in fluorescence intensities throughout the experiment was not significant (p?>?0.05). The cell densities determined by FISH and light microscopy (LM) were comparable, without any significant difference (p?>?0.05) between them. In general, the established FISH probe was promising for specific, rapid, precise detection of a selected set of P. micans in natural samples and served as a good detection model for other Prorocentrum in the future.     

Succession of aquatic macrophytes in the Modern Yellow River Delta after 150 years of alluviation

This study evaluated the succession process of aquatic macrophytes after 150 years of alluviation in the Modern Yellow River Delta, China, and identified the roles of various environmental parameters that regulate vegetation succession. From 2007 to 2008, 214 quadrats were surveyed and 19 environmental parameters were measured, including elevation, plot distance from the seashore, 10 water parameters, and 7 soil parameters. Forty-six aquatic macrophytes belonging to 20 families and 34 genera were identified across the entire delta. Emergent and submerged plants were the most frequent species, accounting for 58.7 and 34.8 % of all species, respectively. Detrended canonical correspondence analysis showed that the presence of aquatic macrophytes in this delta was primarily regulated by water salinity, soil salinity, and distance from the seashore, followed by nutrient concentrations (e.g., NH₄ ⁺, total soil N and PO₄ ^? of water). Salinity-tolerant species (e.g., Ruppia maritima, Phragmites australis, and Typha angustifolia) tended to be widely distributed across the entire delta. In contrast, salinity-sensitive species (e.g., Ceratophyllum demersum, Hydrilla verticillata, and Potamogeton malaianus) tended to be distributed in areas at the early stages of succession, which were relatively distant from the shore. Moreover, this study also confirmed that species richness and diversity were negatively correlated with water and soil salinity, which in turn were negatively correlated with plot distance from the shore. These data indicate that the primary drivers of aquatic macrophyte succession in this delta are water and soil salinity. The information assimilated here is used to propose management practices for the protection of aquatic macrophytes in the Yellow River Delta.     

Proteomic analysis of kidney and protective effects of grape seed procyanidin B2 in db/db mice indicate MFG-E8 as a key molecule in the development of diabetic nephropathy

Diabetic nephropathy, as a severe microvascular complication of diabetic mellitus, has become the leading cause of end-stage renal diseases. However, no effective therapeutic strategy has been developed to prevent renal damage progression to end stage renal disease. Hence, the present study evaluated the protective effects of grape seed procyanidin B2 (GSPB2) and explored its molecular targets underlying diabetic nephropathy by a comprehensive quantitative proteomic analysis in db/db mice. Here, we found that oral administration of GSPB2 significantly attenuated the renal dysfunction and pathological changes in db/db mice. Proteome analysis by isobaric tags for relative and absolute quantification (iTRAQ) identified 53 down-regulated and 60 up-regulated proteins after treatment with GSPB2 in db/db mice. Western blot analysis confirmed that milk fat globule EGF-8 (MFG-E8) was significantly up-regulated in diabetic kidney. MFG-E8 silencing by transfection of MFG-E8 shRNA improved renal histological lesions by inhibiting phosphorylation of extracellular signal-regulated kinase1/2 (ERK1?2), Akt and glycogen synthase kinase-3beta (GSK-3β) in kidneys of db/db mice. In contrast, over-expression of MFG-E8 by injection of recombinant MFG-E8 resulted in the opposite effects. GSPB2 treatment significantly decreased protein levels of MFG-E8, phospho-ERK1/2, phospho-Akt, and phospho-GSK-3β in the kidneys of db/db mice. These findings yield insights into the pathogenesis of diabetic nephropathy, revealing MFG-E8 as a new therapeutic target and indicating GSPB2 as a prospective therapy by down-regulation of MFG-E8, along with ERK1/2, Akt and GSK-3β signaling pathway.     

维生素D3对自发性高血压大鼠靶器官炎症的影响

目的探索维生素D3与高血压和炎症的关系。方法自发性高血压大鼠20只,随机分为对照组和实验组,各10只。实验组大鼠腹腔注射维生索D3制剂3μg／kg（溶于20％丙二醇0．5mL中）,每周2次;对照组仅腹腔注射丙二醇0．5mL,两组均干预12周。实验过程中监测大鼠血压变化。干预前后,酶联免疫法检测血清25（OH）D3、钙、白细胞介素-6（IL-6）、基质金属蛋白酶-9（MMP-9）的浓度;计算肾脏-体重比和心脏-体重比;HE染色观察两组大鼠肾脏、心脏、主动脉、小动脉组织病理改变。结果实验组和对照组在干预前血压无差异显著性（P〉0．05）;干预后,实验组和对照组大鼠平均收缩压分别为（157±9）mmHg和（173±8）mmHg（P〈0．05）。实验组的血清25（OH）D3、血钙水平比对照组高（P〈0．05）,IL-6、MMP-9水平实验组比对照组低（P〈0．05）。实验组的心脏-体重比小于对照组（P〈0．05）。实验组的肾脏、心脏和小动脉高血压、炎性损害明显轻于对照组。结论规律的维生素D3用药能够抑制炎症因子IL-6、MMP-9的产生,抑制机体炎症反应,调节控制血压。     

珠子参地上部分氨基酸测定及营养评价

对珠子参茎、叶、花的氨基酸组成与含量进行测定和营养评价分析。结果表明,珠子参茎、叶、花中均含有17种常见氨基酸,氨基酸总量分别为3.73%,14.80%和8.72%;珠子参的茎中必需氨基酸与总氨基酸的比值(E/T)为0.39,必需氨基酸与非必需氨基酸的比值(E/N)为0.64,叶中E/T为0.41,E/N为0.71,花中E/T为0.39,E/N为0.63,氨基酸配比较为合理;珠子参茎、叶、花中蛋氨酸+胱氨酸均为第一限制氨基酸;珠子参茎、叶、花中均含有γ-氨基丁酸,含量分别为0.12%,0.26%和0.16%,叶片中γ-氨基丁酸的含量最高。     

Retinoic acid alters the proliferation and survival of the epithelium and mesenchyme and suppresses Wnt/β-catenin signaling in developing cleft palate

Retinoic acid (RA) contributes to cleft palate; however, the cellular and molecular mechanisms responsible for the deleterious effects on the developing palate are unclear. Wnt signaling is a candidate pathway in the cleft palate and is associated with RA in organ development; thus, we aim to investigate whether RA-induced cleft palate also results from altered Wnt signaling. Administration of RA to mice altered cell proliferation and apoptosis in craniofacial tissues by regulating molecules controlling cell cycle and p38 MAPK signaling, respectively. This altered cell fate by RA is a crucial mechanism contributing to 100% incidence of cleft palate. Moreover, Wnt/β-catenin signaling was completely inhibited by RA in the early developing palate via its binding and activation with RA receptor (RAR) and is responsible for RA-induced cleft palate. Furthermore, PI3K/Akt signaling was also involved in actions of RA. Our findings help in elucidating the mechanisms of RA-induced cleft palate.     

Cancer-initiating cells derived from human rectal adenocarcinoma tissues carry mesenchymal phenotypes and resist drug therapies

Accumulating evidence indicates that cancer-initiating cells (CICs) are responsible for cancer initiation, relapse, and metastasis. Colorectal carcinoma (CRC) is typically classified into proximal colon, distal colon, and rectal cancer. The gradual changes in CRC molecular features within the bowel may have considerable implications in colon and rectal CICs. Unfortunately, limited information is available on CICs derived from rectal cancer, although colon CICs have been described. Here we identified rectal CICs (R-CICs) that possess differentiation potential in tumors derived from patients with rectal adenocarcinoma. The R-CICs carried both CD44 and CD54 surface markers, while R-CICs and their immediate progenies carried potential epithelial–mesenchymal transition characteristics. These R-CICs generated tumors similar to their tumor of origin when injected into immunodeficient mice, differentiated into rectal epithelial cells in vitro, and were capable of self-renewal both in vitro and in vivo. More importantly, subpopulations of R-CICs resisted both 5-fluorouracil/calcium folinate/oxaliplatin (FolFox) and cetuximab treatment, which are the most common therapeutic regimens used for patients with advanced or metastatic rectal cancer. Thus, the identification, expansion, and properties of R-CICs provide an ideal cellular model to further investigate tumor progression and determine therapeutic resistance in these patients.