Effect of a Functional Phospholipid Metabolome-Protein Association Pathway on the Mechanism of COVID-19 Disease Progression

This study aimed to explore the clinical practice of phospholipid metabolic pathways in COVID-19. In this study, 48 COVID-19 patients and 17 healthy controls were included. Patients were divided into mild (n=40) and severe (n=8) according to their severity. Phospholipid metabolites, TCA circulating metabolites, eicosanoid metabolites, and closely associated enzymes and transfer proteins were detected in the plasma of all individuals using metabolomics and proteomics assays, respectively. 30 of the 33 metabolites found differed significantly (P<0.05) between patients and healthy controls (P<0.05), with D-dimmer significantly correlated with all of the lysophospholipid metabolites (LysoPE, LysoPC, LysoPI and LPA). In particular, we found that phosphatidylinositol (PI) and phosphatidylcholine (PC) could identify patients from healthy controls (AUC 0.771 and 0.745, respectively) and that the severity of the patients could be determined (AUC 0.663 and 0.809, respectively). The last measurement before discharge also revealed significant changes in both PI and PC. For the first time, our study explores the significance of the phospholipid metabolic system in COVID-19 patients. Based on molecular pathway mechanisms, three important phospholipid pathways related to Ceramide-Malate acid (Cer-SM), Lysophospholipid (LPs), and membrane function were established. Clinical values discovered included the role of Cer in maintaining the inflammatory internal environment, the modulation of procoagulant LPA by upstream fibrinolytic metabolites, and the role of PI and PC in predicting disease aggravation.     

生态环境移动数据采集系统研究与实现

针对快速、实时、有效采集并录入生态环境野外调查大样本量、多源数据的需求,充分应用移动GIS技术、移动智能终端、3G等现代信息技术优势,提出了基于ArcGIS for Mobile的移动数据采集方案,研究解决了包括系统运行机制、数据访问模式、移动数据库技术等面向全国生态环境野外调查的移动GIS关键技术,设计并研发野外调查移动数据采集系统。该系统采用C#和Java语言,以SQL Server 2008 为服务器端的数据库环境,在Microsoft Visual Studio 2008集成开发环境上实现设计开发,并在全国生态环境10年变化遥感调查与评估项目土地覆盖类型地面核查、生态系统参数野外观测等工作中予以应用。实践检验表明：该系统实现了野外调查数据的数字采集、智能校验、实时上传与有效管理,简化了填报程序,规范了填报内容,提高了工作效率,能够为生态环境相关的调查数据采集提供信息化支持。     

马尾松幼苗根系和光合碳供应对土壤性质变化和温室气体排放的驱动作用

森林植被受全球气候变化、森林经营活动及病虫害等多种干扰,导致林地光合碳供应水平及根系输入量发生变化。在此背景下,土壤性质及土壤温室气体排放的响应及其机理是预测森林碳汇功能变化及森林可持续经营的重要依据。以2年生马尾松盆栽苗为对象,通过单株/盆和3株/盆栽植密度控制根系输入量、通过环割和截干控制光合碳向地下的供应能力,模拟森林植被干扰导致的根系输入量及光合碳供应变化对土壤理化性质、微生物群落结构及温室气体排放的影响。结果表明,苗木根系非结构性碳水化合物(TNC)含量和氮含量比单株/盆低;3株/盆的土壤速效氮含量比单株/盆低,土壤革兰氏阳性菌、厌氧菌、放线菌及丛枝菌根真菌丰富度均比单株/盆显著增加,3株/盆的土壤二氧化碳(CO₂)排放速率较高,但土壤氧化亚氮(N₂O)排放速率差异不显著。无论是单株/盆还是3株/盆,环割和截干处理后,根系生物量、根系长度及表面积均比对照显著下降;根系TNC含量显著下降。土壤和根系氮含量都有增加趋势;土壤微生物生物量碳(SMBC)含量降低,而土壤微生物生物量氮(SMBN)则提高。环割和截干后,土壤中各种微生物组成丰富度均有下降趋势,土壤CO₂排放速率显著下降,土壤N₂O排放速率则显著提高。根系输入量及光合碳供应对土壤细菌和真菌含量均有显著影响,土壤细菌含量与根系生物量、SMBC和SMBN显著正相关;土壤真菌含量与土壤温度显著负相关,与根系生物量、SMBC和SMBN显著正相关。相关分析表明,土壤CO₂排放通量与土壤温度、土壤湿度及根系生物量显著正相关,与土壤硝态氮显著负相关;土壤N₂O排放通量与土壤温度和土壤湿度显著正相关。以上研究表明,根系输入量与地上光合碳供应共同作用,改变土壤理化性质及微生物环境,进而影响土壤温室气体排放。     

牡丹根部内生细菌的分离鉴定及脂肽类物质的拮抗活性研究

【目的】从牡丹(Paeonia suffruticosa Andr.)根部组织中分离鉴定内生细菌,测定拮抗菌株脂肽类活性物质的体外抑菌活性。【方法】采用平板对峙法筛选出对牡丹灰霉病菌(Botrytis paeoniae Oadem)、牡丹炭疽病菌(Gloeosporium sp.)、牡丹黑斑病菌(Altenaria sp.)、牡丹黄斑病菌(Phyllosticta commonsii)有拮抗作用的内生细菌。基于形态特征、生理生化特性和16S rRNA基因序列同源性鉴定拮抗菌株。根据脂肽类抗菌物质合成相关基因序列对拮抗菌株进行基因扩增检测,采用酸沉淀法提取拮抗菌株的脂肽类物质,平板对峙法测定脂肽类物质的体外抑菌活性。【结果】从牡丹根部组织中共分离获得62株内生细菌,其中菌株Md31和Md33对4种病原菌均有较明显的抑制作用。Md31和Md33被鉴定为解淀粉芽孢杆菌(Bacillus amyloliquefaciens)。通过对菌株Md31和Md33进行5个脂肽类合成功能基因bmyB、fenD、ituC、srfAA和srfAB的检测,序列同源性分析,表明两个菌株具有合成脂肽类物质的能力。菌株Md31和Md33的脂肽类粗提物对所测试的牡丹病原真菌均具有不同程度的抑制作用。【结论】获得了2株对牡丹病原菌有良好抑制效果的解淀粉芽孢杆菌Md31和Md33,两个菌株的脂肽类粗提物也具有较强的体外抑菌活性,该研究为牡丹内生细菌的进一步开发应用奠定了基础。     

青藏高原不同牧草人工草地对土壤线虫群落的影响

为缓解草蓄矛盾,青藏高原人工草地得到快速发展。土壤线虫对环境变化敏感,是草地生态系统的重要组成部分。然而,不同牧草人工草地对土壤线虫群落的影响尚不明确。2016年7月,对多年生禾本科(垂穗披碱草Elymus nutans Griseb.、老芒麦Elymus sibiricus L.、早熟禾Poa annua L.和羊茅Festuca ovina L.)、一年生禾本科燕麦Avena sativa L.和多年生豆科紫花苜蓿Medicago sativa L.等6种单播牧草人工草地(建植期4年)和天然草地(对照)的土壤线虫群落进行了调查。结果表明：(1)土壤线虫隶属于2纲8目32科58属,平均密度为1754个/100 g干土;紫花苜蓿样地的线虫密度最低,为949个/100 g干土;燕麦样地最高,为3267个/100 g干土;(2)与天然草地相比,燕麦样地的线虫群落总密度、多样性以及植食性和杂食-捕食性线虫密度显著增加,而其他人工草地的线虫群落密度、多样性以及植食性、食真菌和食细菌线虫密度均无显著变化;(3)土壤线虫总密度以及各营养类群密度在不同人工草地间差异显著,且均在燕麦样地最高;(4)建...     

体外重构STUB1介导α-1抗胰蛋白酶突变体Z蛋白泛素化修饰反应体系

α-1抗胰蛋白酶Z型突变体蛋白(α-1 antitrypsin Z-mutant protein, ATZ)是引发α-1抗胰蛋白酶缺陷症(α-1 antitrypsin deficiency, AATD)的主要原因,研究ATZ蛋白的泛素化修饰和降解对于治疗AATD具有重要意义。STUB1是一种重要的E3泛素连接酶,参与调节多种蛋白质的泛素化修饰。然而,STUB1是否参与ATZ的泛素化修饰尚未明确。本研究首先将ATZ和STUB1的编码基因克隆到pET28a质粒,构建了这2个蛋白的表达质粒。随后,将重组质粒转入大肠杆菌表达系统,在优化诱导条件实现了重组蛋白的异源表达。通过金属螯合亲和层析技术纯化得到目的蛋白,并通过蛋白质谱分析验证了其氨基酸序列的准确性。利用纯化的ATZ和STUB1重组蛋白,构建了一个体外泛素化修饰反应体系。实验结果显示,在ATP、E1泛素激活酶和E2泛素结合酶的协同作用下,STUB1成功催化了ATZ的泛素化修饰。本研究提供了一种体外获得Z型突变体ATZ纯化蛋白的方法,并确认了STUB1介导ATZ的泛素化修饰功能,推进了对α-1抗胰蛋白酶Z型突变体蛋白在细胞内降解过程的调控机制的理解。     

Quantitative regulation of the thermal stability of enveloped virus vaccines by surface charge engineering to prevent the self-aggregation of attachment glycoproteins

The development of thermostable vaccines can relieve the bottleneck of existing vaccines caused by thermal instability and subsequent poor efficacy, which is one of the predominant reasons for the millions of deaths caused by vaccine-preventable diseases. Research into the mechanism of viral thermostability may provide strategies for developing thermostable vaccines. Using Newcastle disease virus (NDV) as model, we identified the negative surface charge of attachment glycoprotein as a novel determinant of viral thermostability. It prevented the temperature-induced aggregation of glycoprotein and subsequent detachment from virion surface. Then structural stability of virion surface was improved and virus could bind to and infect cells efficiently after heat-treatment. Employing the approach of surface charge engineering, thermal stability of NDV and influenza A virus (IAV) vaccines was successfully improved. The increase in the level of vaccine thermal stability was determined by the value-added in the negative surface charge of the attachment glycoprotein. The engineered live and inactivated vaccines could be used efficiently after storage at 37°C for at least 10 and 60 days, respectively. Thus, our results revealed a novel surface-charge-mediated link between HN protein and NDV thermostability, which could be used to design thermal stable NDV and IAV vaccines rationally.     

C3和C4植物寄主对华北地区棉铃虫越冬代和第一代的影响

确定华北越冬代棉铃虫虫源及其对第一代棉铃虫种群的影响是制定棉铃虫防治策略的基础。以越冬代棉铃虫蛾翅的稳定同位素δ¹³C为天然标记直接判定这些成虫的幼虫期寄主类型,并将雌虫接到春小麦植株上,调查其产卵、孵化、幼虫发育至化蛹、羽化等特征。结果表明,越冬代来自C₃植物(主要为棉花)的成虫个体数量占全部越冬羽化种群的53.1%,所产生的下一代老熟幼虫也较C₄来源的多(55.1%);雌蛾受精率都比较高;卵孵化率较高(52.9%>41.6%);幼虫发育在低龄阶段较比后者快,存活率低,但在高龄幼虫阶段相对后者慢,存活率高;与C₄植物(主要玉米)的来源个体后代的幼虫发育总历期接近,总存活率也相近。显示寄主植物小麦提供的营养条件在第一代棉铃虫的幼虫发育中具有决定性意义,即小麦只在特定阶段才适合幼虫的发育;而且不论是C₃还是C₄寄主来源的越冬代棉铃虫已经适应了这一限制。有效地评价了玉米和棉花等寄主植物对华北地区越冬代和次年第一代棉铃虫的影响,对于分析越冬代棉铃虫的虫源性质和第一代棉铃虫的防治及Bt抗性的治理有重要参考价值。