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Lei Lei Yang Luomiao Cui Bowen Liu HuaLong Wang Jingguo Zheng Hongliang Xin Wei Zou Detang 《Plant Growth Regulation》2021,95(1):97-110
Plant Growth Regulation - β-ketoacyl-CoA synthase is a key enzyme in the biosynthesis of over-long-chain fattty acids; thus, it plays a crucial role in plant resistance to stress. Herein, 33... 相似文献
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Liu Wen-Shen Zheng Hong-Xiang Liu Chang Guo Mei-Na Zhu Shi-Chen Cao Yue Qiu Rong-Liang Morel Jean Louis van der Ent Antony Tang Ye-Tao 《Plant and Soil》2021,461(1-2):565-578
Plant and Soil - Dicranopteris linearis is a rare earth element (REE), aluminium (Al) and silicon (Si) hyperaccumulator plant which occurs in southern China. To date, there have been no studies on... 相似文献
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Yu Yifei Hou Kun Ji Tong Wang Xishu Liu Yining Zheng Yangyang Xu Jinying Hou Yi Chi Guangfan 《Molecular and cellular biochemistry》2021,476(5):2111-2124
Molecular and Cellular Biochemistry - MicroRNAs (miRNA), endogenous non-coding RNAs approximately 22 nucleotides long, regulate gene expression by mediating translational inhibition or mRNA... 相似文献
288.
Tang Xianfa Cheng Hui Cheng Lu Liang Bo Chen Mengyun Zheng Xiaodong Xiao Fengli 《Molecular biology reports》2021,48(8):5955-5964
Molecular Biology Reports - Vitiligo is a complex disease in which patchy depigmentation is the result of an autoimmune-induced loss of melanocytes in affected regions. On the basis of a... 相似文献
289.
Weixu Wang Huanhuan Tan Mingwan Sun Yiqing Han Wei Chen Shengnu Qiu Ke Zheng Gang Wei Ting Ni 《Nucleic acids research》2021,49(9):e54
With the tremendous increase of publicly available single-cell RNA-sequencing (scRNA-seq) datasets, bioinformatics methods based on gene co-expression network are becoming efficient tools for analyzing scRNA-seq data, improving cell type prediction accuracy and in turn facilitating biological discovery. However, the current methods are mainly based on overall co-expression correlation and overlook co-expression that exists in only a subset of cells, thus fail to discover certain rare cell types and sensitive to batch effect. Here, we developed independent component analysis-based gene co-expression network inference (ICAnet) that decomposed scRNA-seq data into a series of independent gene expression components and inferred co-expression modules, which improved cell clustering and rare cell-type discovery. ICAnet showed efficient performance for cell clustering and batch integration using scRNA-seq datasets spanning multiple cells/tissues/donors/library types. It works stably on datasets produced by different library construction strategies and with different sequencing depths and cell numbers. We demonstrated the capability of ICAnet to discover rare cell types in multiple independent scRNA-seq datasets from different sources. Importantly, the identified modules activated in acute myeloid leukemia scRNA-seq datasets have the potential to serve as new diagnostic markers. Thus, ICAnet is a competitive tool for cell clustering and biological interpretations of single-cell RNA-seq data analysis. 相似文献
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