Screening microbial strain for improving the nutritional value of wheat and corn straws as animal feed

From 18 strains of cellulolytic microorganisms including bacteria and filamentous fungi, one strain of soft rot fungus identified as Chaetomium cellulolyticum was screened with respect to stronger decomposition ability of cellulose and hemicellulose and its ability for protein synthesis. As it grew on raw corn straw in solid layer fermentation (SLF) for 5 days, the amino acid content in the fermentation product attained 19.29% (w/w) from 6.43% while the total cell wall was reduced by 54%. A toxicity test with mice showed that the fermentation product is not poisonous. The two filamentous fungi, Trichoderma pseudokoningii S-38 and Penicillium decumbens JU-A10 produced large amounts of extracellular cellulase and hemicellulase in the SLF process, but their growth was limited and they sporulated profusely with regard to their value as animal feed products.     

红香芋试管球茎膨大过程中主要碳水化合物含量以及淀粉合成相关酶活性的动态研究

为了探讨芋(Colocasia esculenta(L.)Schott)试管球茎膨大期间糖类物质积累特点,以红香芋无菌试管苗为材料,研究了高浓度蔗糖诱导条件下,红香芋试管球茎形成及膨大过程中主要碳水化合物的变化规律,以及与相关酶活性的关系。结果表明:(1)在红香芋试管球茎膨大过程中,果糖、葡萄糖和总可溶性糖含量均呈先升高后降低的变化趋势,果糖含量在诱导至第27天时达到最大值,而总可溶性糖和葡萄糖含量均在第34天达到峰值;蔗糖含量呈现先上升、后下降、再上升的变化趋势,在培养第48天时积累量达到最大值。(2)红香芋试管球茎总淀粉含量、直链和支链淀粉含量均随培养时间的延长而增加,至膨大后期总淀粉含量达到最大值,淀粉总含量约占干重的76%,并以支链淀粉含量为主。(3)解剖学观察发现,随着试管球茎的形成与膨大,贮藏组织中淀粉粒密度不断增大,至球茎膨大后期,淀粉粒布满薄壁细胞,并且处于比较稳定的水平。(4)诱导培养至第41天时,试管球茎的ADPG焦磷酸化酶和Q-酶活性均达到最大值,分别为1.22和2.39μmol·g~(-1)·min~(-1)。相关性分析发现,从茎基部开始膨大(20d)至ADPG焦磷酸化酶和Q-酶活性达峰值(41d)时,ADPG焦磷酸化酶活性与总淀粉含量、Q-酶活性与支链淀粉含量的相关系数分别为0.819和0.738,二者均呈极显著正相关。研究认为,淀粉的积累以及可溶性糖类含量的变化与红香芋试管球茎的膨大发育密切相关,并受到相关酶的调控。     

Wild-type rabies virus induces autophagy in human and mouse neuroblastoma cell lines

Different rabies virus (RABV) strains have their own biological characteristics, but little is known about their respective impact on autophagy. Therefore, we evaluated whether attenuated RABV HEP-Flury and wild-type RABV GD-SH-01 strains triggered autophagy. We found that GD-SH-01 infection significantly increased the number of autophagy-like vesicles, the accumulation of enhanced green fluorescent protein (EGFP)-LC3 fluorescence puncta and the conversion of LC3-I to LC3-II, while HEP-Flury was not able to induce this phenomenon. When evaluating autophagic flux, we found that GD-SH-01 infection triggers a complete autophagic response in the human neuroblastoma cell line (SK), while autophagosome fusion with lysosomes was inhibited in a mouse neuroblastoma cell line (NA). In these cells, GD-SH-01 led to apoptosis and mitochondrial dysfunction while triggering autophagy, and apoptosis could be decreased by enhancing autophagy. To further identify the virus constituent causing autophagy, 5 chimeric recombinant viruses carrying single genes of HEP-Flury instead of those of GD-SH-01 were rescued. While the HEP-Flury virus carrying the wild-type matrix protein (M) gene of RABV triggered LC3-I to LC3-II conversion in SK and NA cells, replacement of genes of nucleoprotein (N), phosphoprotein (P) and glycoprotein (G) produced only minor autophagy. But no one single structural protein of GD-SH-01 induced autophagy. Moreover, the AMPK signaling pathway was activated by GD-SH-01 in SK. Therefore, our data provide strong evidence that autophagy is induced by GD-SH-01 and can decrease apoptosis in vitro. Furthermore, the M gene of GD-SH-01 may cooperatively induce autophagy.     

Profile and Determinants of Retinal Optical Intensity in Normal Eyes with Spectral Domain Optical Coherence Tomography

Purpose

To investigate the profile and determinants of retinal optical intensity in normal subjects using 3D spectral domain optical coherence tomography (SD OCT).

Methods

A total of 231 eyes from 231 healthy subjects ranging in age from 18 to 80 years were included and underwent a 3D OCT scan. Forty-four eyes were randomly chosen to be scanned by two operators for reproducibility analysis. Distribution of optical intensity of each layer and regions specified by the Early Treatment of Diabetic Retinopathy Study (ETDRS) were investigated by analyzing the OCT raw data with our automatic graph-based algorithm. Univariate and multivariate analyses were performed between retinal optical intensity and sex, age, height, weight, spherical equivalent (SE), axial length, image quality, disc area and rim/disc area ratio (R/D area ratio).

Results

For optical intensity measurements, the intraclass correlation coefficient of each layer ranged from 0.815 to 0.941, indicating good reproducibility. Optical intensity was lowest in the central area of retinal nerve fiber layer, ganglion cell layer, inner plexiform layer, inner nuclear layer, outer plexiform layer and photoreceptor layer, except for the retinal pigment epithelium (RPE). Optical intensity was positively correlated with image quality in all retinal layers (0.553<β<0.851, p<0.01), and negatively correlated with age in most retinal layers (-0.362<β<-0.179, p<0.01), except for the RPE (β = 0.456, p<0.01), outer nuclear layer and photoreceptor layer (p>0.05). There was no relationship between retinal optical intensity and sex, height, weight, SE, axial length, disc area and R/D area ratio.

Conclusions

There was a specific pattern of distribution of retinal optical intensity in different regions. The optical intensity was affected by image quality and age. Image quality can be used as a reference for normalization. The effect of age needs to be taken into consideration when using OCT for diagnosis.     

黄顶菊凋落物分解对节肢动物群落结构的影响

选择黄顶菊(Flaveria bidentis)入侵的林地、农田、荒地、沟渠等4种生境作为调查样地, 比较黄顶菊与本地植物凋落物的分解速率及凋落物分解对节肢动物群落结构的影响。于2014年10月凋落物高峰期在各样地内分别搜集黄顶菊与本地植物的凋落物, 每种凋落物称取20 g装入尼龙网分解袋中, 放入各生境。2015年的每个月将不同生境不同处理凋落袋各取回10袋, 用Tullgren法分离节肢动物。 4种生境共捕获17,466头, 隶属8纲18目, 4种生境的优势类群皆为蜱螨目和啮目。其中, 林地、农田、荒地、沟渠4种生境处理组中节肢动物数量分别为1,698头, 1,838头, 2,631头, 3,413头, 分别比对照组高18%, 53%, 22%, 11%。多数月份黄顶菊凋落物中的节肢动物丰富度及多样性指数高于同生境对照组, 并且在黄顶菊生长盛期差异显著; 黄顶菊凋落物的分解速率高于对照植物分解速率, 且各月份凋落物分解速率动态与节肢动物数量变化动态呈显著相关。黄顶菊凋落物对节肢动物的影响与人为干扰程度有关, 这种影响在人为干扰较小的荒地与沟渠生境中更为明显。综上所述, 黄顶菊凋落物的分解改变了节肢动物群落结构, 并引起节肢动物多样性的升高。     

Methylated DNA/RNA in Body Fluids as Biomarkers for Lung Cancer

DNA/RNA methylation plays an important role in lung cancer initiation and progression. Liquid biopsy makes use of cells, nucleotides and proteins released from tumor cells into body fluids to help with cancer diagnosis and prognosis. Methylation of circulating tumor DNA (ctDNA) has gained increasing attention as biomarkers for lung cancer. Here we briefly introduce the biological basis and detection method of ctDNA methylation, and review various applications of methylated DNA in body fluids in lung cancer screening, diagnosis, prognosis, monitoring and treatment prediction. We also discuss the emerging role of RNA methylation as biomarkers for cancer.