湖北石首麋鹿国家级自然保护区麋鹿种群动态

为实现麋鹿回归大自然的目标,1993年和1994年,湖北石首麋鹿国家级自然保护区(以下简称石首麋鹿保护区)分别从北京麋鹿苑引入麋鹿30头(8♂,22♀)和34头(10♂,24♀)建立了繁殖种群。自2000年6月开始,作者每月一次(7-10d)实地监测石首麋鹿保护区内、外的麋鹿种群动态。到2006年产仔季节结束后,该保护区内的麋鹿种群达522头,2006年产仔前性比为1∶1.22。用指数增长模型拟合种群增长曲线,1998年后石首麋鹿保护区内的麋鹿种群呈指数增长(Nt=84e0.226t),其瞬时增长率为0.226;1998年夏季长江暴发特大洪灾,石首麋鹿保护区内的部分麋鹿逃逸到长江南岸,形成了自然野化麋鹿种群。该自然野化种群比保护区内麋鹿种群增长快,其瞬时增长率达到0.267。湖北石首和江苏大丰两个国家级自然保护区内麋鹿种群的出生率和增长率差异显著,而两地的死亡率无显著差异。石首麋鹿保护区内的麋鹿种群年均出生率(26.8%,P=0.010)和年均增长率(21.7%,P=0.038)均显著地高于江苏大丰国家级自然保护区内麋鹿种群的年均出生率(21.6%)和年均增长率(17.0%)。由于生境退化和人为干扰,当前石首麋鹿保护区内的麋鹿种群增长已开始出现密度制约迹象,亟待采取有效措施来改善麋鹿的生存繁衍条件。     

水稻褐飞虱抗性基因研究进展

随着全球性气候变暖以及稻作区耕作栽培措施的改变,稻褐飞虱已成为严重危害水稻产量的害虫之一.综述当前水稻褐飞虱抗性基因的定位、克隆以及抗性机制的最新研究进展,并对抗褐飞虱水稻育种的利用现状作报道.     

Systems biology analysis reveals new insights into invasive lung cancer

Background

Adenocarcinoma in situ (AIS) is a pre-invasive lesion in the lung and a subtype of lung adenocarcinoma. The patients with AIS can be cured by resecting the lesion completely. In contrast, the patients with invasive lung adenocarcinoma have very poor 5-year survival rate. AIS can develop into invasive lung adenocarcinoma. The investigation and comparison of AIS and invasive lung adenocarcinoma at the genomic level can deepen our understanding of the mechanisms underlying lung cancer development.

Results

In this study, we identified 61 lung adenocarcinoma (LUAD) invasive-specific differentially expressed genes, including nine long non-coding RNAs (lncRNAs) based on RNA sequencing techniques (RNA-seq) data from normal, AIS, and invasive tissue samples. These genes displayed concordant differential expression (DE) patterns in the independent stage III LUAD tissues obtained from The Cancer Genome Atlas (TCGA) RNA-seq dataset. For individual invasive-specific genes, we constructed subnetworks using the Genetic Algorithm (GA) based on protein-protein interactions, protein-DNA interactions and lncRNA regulations. A total of 19 core subnetworks that consisted of invasive-specific genes and at least one putative lung cancer driver gene were identified by our study. Functional analysis of the core subnetworks revealed their enrichment in known pathways and biological progresses responsible for tumor growth and invasion, including the VEGF signaling pathway and the negative regulation of cell growth.

Conclusions

Our comparison analysis of invasive cases, normal and AIS uncovered critical genes that involved in the LUAD invasion progression. Furthermore, the GA-based network method revealed gene clusters that may function in the pathways contributing to tumor invasion. The interactions between differentially expressed genes and putative driver genes identified through the network analysis can offer new targets for preventing the cancer invasion and potentially increase the survival rate for cancer patients.

     

MiR-203 Suppresses ZNF217 Upregulation in Colorectal Cancer and Its Oncogenicity

Zinc finger protein 217 (ZNF217) is essential for cell proliferation and has been implicated in tumorigenesis. However, its expression and exact roles in colorectal cancer (CRC) remain unclear. In this study, we demonstrated that ZNF217 expression was aberrantly upregulated in CRC tissues and associated with poor overall survival of CRC patients. In addition, we found that ZNF217 was a putative target of microRNA (miR)-203 using bioinformatics analysis and confirmed that using luciferase reporter assay. Moreover, in vitro knockdown of ZNF217 or enforced expression of miR-203 attenuated CRC cell proliferation, invasion and migration. Furthermore, combined treatment of ZNF217 siRNA and miR-203 exhibited synergistic inhibitory effects. Taken together, our results provide new evidences that ZNF217 has an oncogenic role in CRC and is regulated by miR-203, and open up the possibility of ZNF217- and miR-203-targeted therapy for CRC.     

蛋白质核心设计的序列组合文库筛选方法

本文提出一种新的蛋白质序列组合文库筛选方法,异型自系统最优法,用于从头设计蛋白质核心。经λ－阻遏蛋白、噬菌体４３４ＣＲＯ蛋白、白介素－４、硫氧还蛋白、泛肽等的检验,表明此方法用于从头设计蛋白质的核心是可行的。     

根癌农杆菌对甘蓝型油菜的转化及转基因植株的再生

用根癌农杆菌（Ａｇｒｏｂａｃｔｅｒｉｕｍ ｔｕｍ ｅｆａｃｉｅｎｓ）共培养法把外源基因导入甘蓝型油菜（Ｂｒａｓｓｉ－ｃａ ｎａｐｕｓＬ．）主要栽培品种“云北２ 号”,获得转基因植株。所用外植体为带有１—２ ｍ ｍ 子叶柄的完整子叶,根癌农杆菌为Ａ２０８ＳＥ（ｐＴｉＴ３７－ＳＥ, ｐＲＯＡ９３）。Ｔｉ质粒ｐＲＯＡ９３ 带有ＮＰＴⅡ及ＧＵＳ嵌合基因。共培养２ 天后转到附加２５ ｍ ｇ／Ｌ卡那霉素的分化培养基（ＭＳ＋ ４．５ ｍ ｇ／ＬＢＡＰ）上。ＡｇＮＯ３ 和羧苄青霉素促进芽的分化,头孢霉素则有抑制作用。最高转化频率为２７％ 。把分化出的茎芽切下,插入含有２５ ｍ ｇ／Ｌ卡那霉素的生根培养基中。羧苄青霉素不利于根的形成。把完整抗性植株移入盛土壤的盆中,生长状况良好。测定β－葡糖苷酸酶活性,８４％ 明显高于对照。以ＮＰＴⅡ基因作探针进行Ｓｏｕｔｈｅｒｎ ｂｌｏｔ分析,证实外源基因已插入到植物细胞基因组中     

Genetic diversity of the natural populations of Arabidopsis thaliana in China

Although extensive studies have been conducted on the genetic structure of Arabidopsis thaliana (A. thaliana) populations worldwide, the populations from China have never been studied. In this study, we collected 560 individuals from 19 natural populations of A. thaliana distributed in East China along the lower reaches of the Yangtze River, and two populations from northwest China (Xinjiang Province). We adopted two kinds of molecular marker, inter-simple sequence repeats (ISSRs) and random amplified polymorphic DNA (RAPDs) to investigate the genetic diversity within and among populations, and the correlation between the genetic and geographic distances. Thirteen ISSR primers produced 165 polymorphic bands (PPB) (96%) and 11 RAPD primers produced 162 polymorphic bands (98%) in about 560 individuals. The two marker systems generated similar patterns of genetic diversity in these natural populations. The AMOVA analysis indicated about 42-45% of the total genetic variation existed within populations, and found possible geographic structure. The Mantel test revealed a significant correlation between the geographic distance and the genetic distance of these populations in general. A close genetic relationship was found among four populations in the Jiangxi Province, and these always appeared clustered together as a monophyletic group in unweighted pair-group method with arithmetic averages dendrograms based on both ISSR and RAPD data sets. Based on the observation of recolonization and extinction of naturally distributed populations of A. thaliana, and the pattern of their genetic differentiation, the distribution of this species in China might be a result of natural dispersal under the strong influence of human activity.     

猪戊肝病毒存在准种现象

为研究猪戊肝病毒准种存在情况,采用逆转录-巢式聚合酶链反应法(RT-nested-PCR)对四株猪戊肝病毒(Hepatitis E virus)第2可读框(ORF2)部分序列进行PCR扩增,将产物克隆后,每个毒株分别随机挑取20个阳性克隆测序,进行DNA序列分析。结果显示4株HEV不同克隆间的ORF2核苷酸序列同源性分别为96.8%~99.7%、98.8%~99.7%、98.8%~99.7%和100%,有变异的克隆核苷酸序列与上海株(SAAS-JDY5)同源性为96.8%~100%。由此证实感染戊肝病毒的猪个体内存在HEV准种。     

成年大鼠海马CA1区锥体细胞K_(ATP)通道的特性

为了解成年大鼠海马CA1区锥体细胞KATP 通道的特性 ,实验采用膜片钳技术的内面向外式记录法 ,在急性分离的CA1区锥体神经元上 ,研究了可被胞浆侧ATP所抑制的钾离子单通道的特性。当细胞膜内外两侧的K 浓度均为 14 0mmol/L时 ,通道的电导为 63pS ,翻转电位为 1 71mV ,通道呈弱内向整流性。在负钳制电位时 ,通道开放时常被短时程的关闭所打断 ,而在正钳制电位时 ,这种短时程的关闭状态明显少于负钳制电位时。但通道开放概率未见明显的电压依赖性。ATP对通道活动的抑制作用呈浓度依赖性 ,抑制通道活动 5 0 %的ATP浓度为 0 1mmol/L。KATP 通道的特异性阻断剂tolbutamide (甲糖宁 ,1mmol/L)可完全阻断通道的活动 ,而KATP 通道开放剂diazoxide (二氮嗪 ,1mmol/L)则不增强通道的活动。     

Further Daphniphyllum Alkaloids with Insecticidal Activity from the Bark of Daphniphyllum macropodum Miq.

Two new Daphniphyllum alkaloids, macropodumines J and K ( 1 and 2 , resp.), together with six known structurally related alkaloids, 3 – 8 , were isolated from the bark of Daphniphyllum macropodum Miq . The structures of the new compounds 1 and 2 were elucidated on the basis of a comprehensive analysis of their spectroscopic and chemical data. Macropodumine J ( 1 ) contains a CN group which is relatively rare in naturally occurring alkaloids. All isolated compounds were tested for their insecticidal activities against a number of insect species. Daphtenidine C ( 5 ) is the most active compound against Plutella xylostella. This is the first report of insecticidal properties of Daphniphyllum alkaloids.