Taxonomic review and phylogenetic inference elucidate the evolutionary history of Mesozoic Procercopidae,with new data from the Cretaceous Jehol Biota of NE China (Hemiptera,Cicadomorpha)

The Mesozoic family Procercopidae is widely treated as the ancient group of Cercopoidea and a transitional unit to recent lineages, but its evolution and diversity are vague due to fragmentary fossil record and confusing taxonomic history. Herein, an extensive taxonomic review of Procercopidae is presented and some new fossils are reported from the Lower Cretaceous Yixian Formation of NE China. As a result, Chengdecercopis Hong, 1983 is transferred from Procercopidae to Sinoalidae; Procercopis longipennis Becker-Migdisova, 1962 and P shawanensis Zhang, Wang and Zhang, 2003 are transferred to Procercopina Martynov, 1937, resulting in Procercopina longipennis (Becker-Migdisova, 1962), comb. n. and P shawanensis (Zhang, Wang and Zhang, 2003), comb. n.; Luanpingia senjituensis Hong, 1984 is transferred to Stellularis Chen, Yao and Ren, 2015, leading to Stellulari senjituensis (Hong, 1984), comb. n.; Anthoscytina macula Hu, Yao and Ren, 2014 is transferred to Sinocercopis Hong, 1982, and Sunoscytinopteris (Scytinopteridae) and Cathaycixius (Cixiidae) are treated as junior homonym names of Sinocercopis, leading to Sinocercopis macula (Hu, Yao and Ren, 2014), comb. n., S lushangfenensis (Hong, 1984), comb. n., S pustulosis (Ren, 1995), comb. n., and S trinervis (Ren, 1995), comb. n. Additionally, two new species are erected: Stellularis bineuris Chen and Wang, sp. n. and S minutus Chen and Wang, sp. n. Our cladistic analysis based on wing (tegmen and hind wing) characteristics recovers the high-level relationships within Cercopoidea: Sinoalidae + (Procercopidae + (Cercopionidae + modern cercopoids)). Within the family Procercopidae, the cladistic analysis reveals that the Middle to Late Jurassic Titanocercopis and Jurocercopis and the Cretaceous Cretocercopis occupy the basal position, and a gradual change in wing venation can be recognized from the Early Jurassic Procercopis and Procercopina to the Jurassic Anthoscytina, and then to the Cretaceous Stellularis and Sinocercopis. The two Cretaceous genera, sharing wing traits with extant cercopoids, likely represent transitional forms between Procercopidae and recent Cercopoidea; however, they are very similar to their Jurassic relatives in body structures, suggesting it is applicable to attribute them to Procercopidae. Furthermore, our analysis suggests that the extinction of Procercopidae and the origin and early diversification of modern Cercopoidea approximately coincided with the rise and explosive radiation of angiosperms in the late Early Cretaceous and onwards.     

Genetic basis of kernel nutritional traits during maize domestication and improvement

The nutritional traits of maize kernels are important for human and animal nutrition, and these traits have undergone selection to meet the diverse nutritional needs of humans. However, our knowledge of the genetic basis of selecting for kernel nutritional traits is limited. Here, we identified both single and epistatic quantitative trait loci (QTLs) that contributed to the differences of oil and carotenoid traits between maize and teosinte. Over half of teosinte alleles of single QTLs increased the values of the detected oil and carotenoid traits. Based on the pleiotropism or linkage information of the identified single QTLs, we constructed a trait–locus network to help clarify the genetic basis of correlations among oil and carotenoid traits. Furthermore, the selection features and evolutionary trajectories of the genes or loci underlying variations in oil and carotenoid traits revealed that these nutritional traits produced diverse selection events during maize domestication and improvement. To illustrate more, a mutator distance–relative transposable element (TE) in intron 1 of DXS2, which encoded a rate‐limiting enzyme in the methylerythritol phosphate pathway, was identified to increase carotenoid biosynthesis by enhancing DXS2 expression. This TE occurs in the grass teosinte, and has been found to have undergone selection during maize domestication and improvement, and is almost fixed in yellow maize. Our findings not only provide important insights into evolutionary changes in nutritional traits, but also highlight the feasibility of reintroducing back into commercial agricultural germplasm those nutritionally important genes hidden in wild relatives.     

Genetic variants and underlying mechanisms influencing variance heterogeneity in maize

Traditional genetic studies focus on identifying genetic variants associated with the mean difference in a quantitative trait. Because genetic variants also influence phenotypic variation via heterogeneity, we conducted a variance‐heterogeneity genome‐wide association study to examine the contribution of variance heterogeneity to oil‐related quantitative traits. We identified 79 unique variance‐controlling single nucleotide polymorphisms (vSNPs) from the sequences of 77 candidate variance‐heterogeneity genes for 21 oil‐related traits using the Levene test (P < 1.0 × 10^?5). About 30% of the candidate genes encode enzymes that work in lipid metabolic pathways, most of which define clear expression variance quantitative trait loci. Of the vSNPs specifically associated with the genetic variance heterogeneity of oil concentration, 89% can be explained by additional linked mean‐effects genetic variants. Furthermore, we demonstrated that gene × gene interactions play important roles in the formation of variance heterogeneity for fatty acid compositional traits. The interaction pattern was validated for one gene pair (GRMZM2G035341 and GRMZM2G152328) using yeast two‐hybrid and bimolecular fluorescent complementation analyses. Our findings have implications for uncovering the genetic basis of hidden additive genetic effects and epistatic interaction effects, and we indicate opportunities to stabilize efficient breeding and selection of high‐oil maize (Zea mays L.).     

The mechanism of Single strand binding protein–RecG binding: Implications for SSB interactome function

The Escherichia coli single‐strand DNA binding protein (SSB) is essential to viability where it functions to regulate SSB interactome function. Here it binds to single‐stranded DNA and to target proteins that comprise the interactome. The region of SSB that links these two essential protein functions is the intrinsically disordered linker. Key to linker function is the presence of three, conserved PXXP motifs that mediate binding to oligosaccharide‐oligonucleotide binding folds (OB‐fold) present in SSB and its interactome partners. Not surprisingly, partner OB‐fold deletions eliminate SSB binding. Furthermore, single point mutations in either the PXXP motifs or, in the RecG OB‐fold, obliterate SSB binding. The data also demonstrate that, and in contrast to the view currently held in the field, the C‐terminal acidic tip of SSB is not required for interactome partner binding. Instead, we propose the tip has two roles. First, and consistent with the proposal of Dixon, to regulate the structure of the C‐terminal domain in a biologically active conformation that prevents linkers from binding to SSB OB‐folds until this interaction is required. Second, as a secondary binding domain. Finally, as OB‐folds are present in SSB and many of its partners, we present the SSB interactome as the first family of OB‐fold genome guardians identified in prokaryotes.     

岷江上游4个栽培树种细根功能性状垂直分布的差异性

细根(直径≤2 mm)功能性状及垂直分布格局是反映植物对土壤资源吸收策略和影响森林地下生态过程的关键。本研究以岷江上游4个人工林树种连香树(Cercidiphyllum japonicum)、白桦(Betula platyphylla)、华山松(Pinus armandii)和油松(P.tabuliformis)为对象,调查不同海拔树木细根功能性状及其在不同土层间的垂直分布格局,并分析细根功能性状分布与构型之间的相关关系。结果表明:阔叶树种比针叶树种有更大的根长密度、生物量、比根长和比表面积,而直径反之;4个树种细根集中在0~20 cm土层,根长密度和生物量在较高海拔地段均显著大于较低海拔,且均随土壤深度增加而减少,但比根长、比表面积和直径无显著的海拔差异,随土层加深也无明显的垂直变化规律;针阔树种间的细根构型差异显著,但不受海拔差异的影响,阔叶树的细根分支强度与一级根数量显著大于针叶树种;一级根数和根尖密度与比根长以及分根比与根长密度和生物量均呈显著正相关,而分叉与几个细根功能参数均呈负相关;随着土层深度增加,细根总生长量明显减少,但细根资源利用效率和策略不变;5个细根功能性状的垂直分布格局差异明显,且受树种特性影响显著,细根分支构型对其垂直分布及资源获取策略具有显著影响。     

甲状腺素对动脉瘤性蛛网膜下腔出血大鼠脑缺氧诱导因子-1α表达的影响及其机制*

目的:探讨甲状腺素(T4)对动脉瘤性蛛网膜下腔出血后大鼠脑缺氧诱导因子-1α(HIF-1α)表达的调节及其机制。方法:72只雄性成年SD大鼠随机分为以下4组:蛛网膜下腔出血模型组(SAH)(n=18)、蛛网膜下腔出血+甲状腺素组(SAH+T4)(n=18)、蛛网膜下腔出血+溶剂组(SAH+溶剂组)(n=18)、假手术组(n=18)。颈内动脉穿刺法建立蛛网膜下腔出血的模型,术后行颅脑CT平扫,建模后立即开始给药,按3 μg/100 g腹腔注射,每隔24 h一次,连续3 d,SAH+T4组予甲状腺素干预,SAH+溶剂组予等体积溶剂干预,均在建模后72 h处死;各组6只大鼠经多聚甲醛灌注处死后石蜡包埋切片行免疫组化染色检测HIF-1α及p-Akt蛋白、6只用TUNEL法检测凋亡,6只用干湿重法做脑水肿含量检测。结果:建模成功后SAH组及SAH+T4组、SAH+溶剂组大鼠的脑组织肿胀明显,蛛网膜下腔可见暗红色血凝块。SAH组神经行为学评分、脑含水量、凋亡率、HIF-1α蛋白、p-Akt蛋白均较假手术组明显增高(P＜0.05);SAH+T4组神经行为学评分、HIF-1α蛋白、p-Akt蛋白均较SAH组明显增高,其脑含水量、凋亡均较SAH组明显减少(P＜0.05)。结论:使用T4替代治疗可以上调动脉瘤性蛛网膜下腔出血后大鼠脑HIF-1α蛋白表达水平,可能是通过激活三磷酸肌醇激酶／蛋白激酶B(PI3K/Akt)信号通路,使凋亡率减小,最终大鼠行为学得以改善,对大鼠脑产生保护作用。     

外源硫对镉胁迫下马齿苋光合性状和矿质元素吸收的影响

从光合反应系统揭示外源硫(S)诱导马齿苋镉(Cd)耐受性的生理机制,为外源S缓解重金属毒害提供理论依据.采用营养液培养,研究外源S供体(NH4)2SO4对100 mg/L Cd胁迫下马齿苋叶片光合色素、光合特性、叶绿素荧光参数和矿质营养元素的影响.结果表明,Cd胁迫可显著降低马齿苋叶片中叶绿素a和叶绿素b含量;净光合速率、蒸腾速率、气孔导度均显著降低,而胞间二氧化碳浓度上升,表明非气孔因素是Cd胁迫诱导马齿苋光合抑制的主要因素;同时,PSⅡ实际光化学效率(ФPSII)、电子传递效率(J)、化学猝灭系数(qP)显著下降,而非化学猝灭系数(qN)显著上升,表明Cd胁迫影响马齿苋PSⅡ反应系统的正常运行.外施400 mg/L(NH4)2SO4显著提高马齿苋叶片叶绿素a含量、叶绿素b含量和叶绿素a/b比值,增强马齿苋叶片光合作用和PSⅡ原初光化学反应量子效率.对5种与光反应系统密切相关的矿质元素含量进行分析发现,Cd处理显著增加马齿苋叶片中的Ca和Fe含量,显著抑制马齿苋对Mg、Mn和Cu的吸收.Cd胁迫下马齿苋叶片的变黄与Mg、Mn的亏缺有关,而与Fe缺乏无关;添加外源S可显著提升马齿苋叶片中Ca、Mg、Fe、Cu和Mn含量,从而增强Cd胁迫下马齿苋叶片的PSII反应系统功能.     

中国造礁石珊瑚分类厘定

造礁石珊瑚是珊瑚礁框架建造者, 具有维持珊瑚礁生态系统功能和稳定性的重要作用, 其分类对于造礁石珊瑚和珊瑚礁的研究与保护至关重要。目前, 随着分子系统学的不断发展, 造礁石珊瑚的分类体系发生改变, 伴随着出现大量同物异名。近年来也出现许多无中文学名的中国造礁石珊瑚新记录种, 这些都给物种认定和命名带来困难, 阻碍了中国造礁石珊瑚的研究与保护工作。为此, 本文收集了中国造礁石珊瑚物种记录文献资料, 采用最新的造礁石珊瑚分类体系, 确认同物异名, 形成中国造礁石珊瑚物种名录, 并对中国造礁石珊瑚物种的中文名进行统一的规范和命名。结果表明, 中国共有造礁石珊瑚2个类群16科77属445种。与《中国动物志·腔肠动物门·珊瑚虫纲·石珊瑚目·造礁石珊瑚》相比, 科级分类阶元新增7个科, 变更5个科; 属级分类阶元新增26属, 变更1属, 合并3属; 种级分类阶元新增291种, 变更13种, 合并20种, 新命名305个物种的中文名。并且筛选出187个同物异名。此外, 由于造礁石珊瑚分类体系现仍有部分争议, 文章也进行了讨论说明。     

干旱河谷微生境变化对乡土植物幼苗定植的影响

干旱区植被斑块状分布格局引起的微生境差异对植被更新影响显著。气候变化和人类活动扰动下, 干旱区生态系统微生境多样化, 急需揭示乡土植物定植对不同微生境斑块变化的响应及其种间差异性, 并采用微生境调控技术促进退化生态系统植被恢复。该研究选择岷江干旱河谷区自然分布的灌木、半灌木和裸地微生境斑块, 采用移栽鞍叶羊蹄甲(Bauhinia brachycarpa)幼苗的试验方法, 揭示微生境变化对幼苗定植的影响; 进一步以极端退化的道路边坡为案例, 通过6种乡土植物种子直播试验探讨微生境调控技术及其对乡土植物幼苗定植的促进作用。结果显示, 在自然生态系统中, 裸地斑块上幼苗保存率和生物量显著大于植被斑块, 表明裸地微生境有利于幼苗定植; 养分添加仅对裸地斑块中幼苗生物量积累有促进作用。在裸地斑块中, 叶片生物量所占的比例和比叶面积较小, 相反根和茎生物量所占的比例较大。道路边坡上植被恢复试验结果显示, 6种乡土植物均能较好地适应土石混杂的边坡生境, 多数物种出苗率大于60%; 灌木幼苗保存率大于75%, 并且形成镶嵌式乡土灌草群落结构。地表覆盖和养分添加提高了边坡上种子出苗率和幼苗保存率, 促进了幼苗定植和结构稳定。该研究提供了有效促进工程边坡上乡土植物定植的方法, 可为干旱、半干旱生态系统退化荒坡和工程破坏地乡土植被恢复提供理论依据和技术指导。     

西双版纳国家级自然保护区蚂蚁-树互作网络空间变异

网络分析(network analysis)可以同时分析群落中的物种多样性和种间关系, 为了解生态群落的稳定性机制提供了新的分析思路和方法。本研究从西双版纳国家级自然保护区的纳板河、勐仑和勐腊(补蚌)三个地点采集了树栖性蚂蚁及树木的种类和数量数据, 对蚂蚁-树组成的二分网络进行了分析, 探讨了3个采样点物种的多样性、网络指标以及群落指标之间的关系。我们采用零模型的方法比较了3个样点的标准化网络参数差异。结果表明: 蚂蚁和树木的物种数以及树的异质性指数(Shannon-Wiener多样性指数、Simpson多样性指数)都呈现出勐仑 > 纳板河 > 补蚌的趋势。树木-蚂蚁的灭绝曲线系数大小关系同样为勐仑 > 纳板河 > 补蚌, 灭绝曲线与树的物种数及异质性指数大小趋势一致, 而与蚂蚁的异质性指数并不吻合。根据Z值的绝对值来看, 网络参数(加权嵌套性、平均连接数、特化水平、模块性、连接度)与群落参数(灭绝曲线系数、生态位重叠)的大小趋势相同, 表现出勐仑 > 纳板河 > 补蚌的趋势。综上所述, 蚂蚁-树互作网络的稳定性(灭绝曲线系数)主要由树的数量和异质性指数决定。网络的加权嵌套性和网络中节点的平均连接数也能促进群落的稳定性。而在一个特化的(数值越大表示专性互作越多)和模块化(具有较多密切互作的节点单元)的网络中, 当低营养级物种灭绝时高营养级物种数量将迅速减少。